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Leptospira
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This page provides access to genotypic data for Leptospira isolates based on core genome MLST (cgMLST). See references for more details.

leptospiraMLST@pasteur.fr

A BIGSdb-Pasteur maintenance is scheduled starting on Monday, Feb 13th at noon. All services will be offline till Tuesday, Feb 14th afternoon at least. During this period, the server and API will be unavailable. Please note that the job submission will be stopped and all unfinished jobs will be killed at 10am on Monday the 13th. Sorry for any inconvenience. If any questions, contact us

Alleles & profiles database
The typing database contains nomenclature - allele definitions that provide an identifier for every unique allele sequence, and MLST profiles that index each unique combination of alleles with a sequence type (ST).
Isolates & genomes database
The isolate database consists of isolate records containing provenance and phenotype information linked to molecular typing information. These records may also include genome assemblies.
Data submission
How does it work?
Submission of whole genome sequences
Template for *Leptospira* isolates

We appreciate if you can recognize our efforts in the acknowledgments section of your publications:

We thank the Institut Pasteur teams for the curation and maintenance of BIGSdb-Pasteur databases at https://bigsdb.pasteur.fr/.

Curators access
Data Curation is performed on a voluntary basis and is based on a community effort.
Sequences & profiles (curators only)
Isolates (curators only)
Other Information
BIGSdb manual
Edit on GitLab