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Streptococcus thermophilus
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This page provides access to Multilocus Sequence Typing (MLST) data for Streptococcus thermophilus isolates. Please see references for more details.

streptococcusMLST@pasteur.fr

Alleles & profiles database
The typing database contains nomenclature - allele definitions that provide an identifier for every unique allele sequence, and MLST profiles that index each unique combination of alleles with a sequence type (ST).
Isolates database
The isolate database consists of isolate records containing provenance and phenotype information linked to molecular typing information. These records may also include genome assemblies.
Data submission
Before contacting the curators, please download and read carefully the files below:
Submission of data for curation
Template for Streptococcus thermophilus isolates

We appreciate if you can recognize our efforts in the acknowledgments section of your publications:

We thank the Institut Pasteur teams for the curation and maintenance of BIGSdb-Pasteur databases at https://bigsdb.pasteur.fr/.

Curators access
Data Curation is performed on a voluntary basis and is based on a community effort.
Sequences and Profiles
Isolates
Other Information
BIGSdb manual
Primers used for amplification and sequencing (MLST)
Edit on GitLab