Full information on isolate FSL J1-208 (id:23)

Projects

This isolate is a member of the following project:

Public isolates
Isolates publicly available for consultation

Provenance/primary metadata

id
23
isolate
FSL J1-208
species
L. monocytogenes
sender
Alexandra Moura, Institut Pasteur
curator
Auto Tagger
update history
17603 updates show details
date entered
2014-04-08
datestamp
2022-10-13
isolation year
1998
continentold
North America
country
USA
continent
North America
source
Animal
source description
goat
phylogenetic lineage
IV
serotype
L; 4a
clonal complex
ST569
sublineage
SL569
cgmlst type
CT1013
accession number
NZ_CM001469; NZ_CM001470

Publications (3)

  • Maury MM, Tsai YH, Charlier C, Touchon M, Chenal-Francisque V, Leclercq A, Criscuolo A, Gaultier C, Roussel S, Brisabois A, Disson O, Rocha EPC, Brisse S, Lecuit M (2016). Uncovering Listeria monocytogenes hypervirulence by harnessing its biodiversity. Nat Genet 48:308-313
  • Moura A, Criscuolo A, Pouseele H, Maury MM, Leclercq A, Tarr C, Björkman JT, Dallman T, Reimer A, Enouf V, Larsonneur E, Carleton H, Bracq-Dieye H, Katz LS, Jones L, Touchon M, Tourdjman M, Walker M, Stroika S, Cantinelli T, Chenal-Francisque V, Kucerova Z, Rocha EP, Nadon C, Grant K, Nielsen EM, Pot B, Gerner-Smidt P, Lecuit M, Brisse S (2016). Whole genome-based population biology and epidemiological surveillance of Listeria monocytogenes. Nat Microbiol 2:16185
  • den Bakker HC, Bowen BM, Rodriguez-Rivera LD, Wiedmann M (2012). FSL J1-208, a virulent uncommon phylogenetic lineage IV Listeria monocytogenes strain with a small chromosome size and a putative virulence plasmid carrying internalin-like genes. Appl Environ Microbiol 78:1876-89

Sequence bin

contigs
1
length
2,776,529 bp
%GC
37.85
Ns
35276
gaps
8
loci tagged
509

Show sequence bin

Similar isolates (determined by classification schemes)

No similar isolates at any threshold. Show groups

Schemes and loci

Navigate and select schemes within tree to display allele designations

Tools

Export:
Analysis: