Profile information for cgST-8 (cgMLST)

cgST
8
LIC_RS00025
1
LIC_RS00030
79
LIC_RS00035
1
LIC_RS00095
1
LIC_RS00150
67
LIC_RS00160
1
LIC_RS00205
1
LIC_RS00245
1
LIC_RS00260
1
LIC_RS00335
1
LIC_RS00340
1
LIC_RS00355
1
LIC_RS00380
1
LIC_RS00385
1
LIC_RS00525
1
LIC_RS00575
1
LIC_RS00580 (hisH)
1
LIC_RS00585
1
LIC_RS00625
1
LIC_RS00655
1
LIC_RS00725
1
LIC_RS00810
1
LIC_RS00815
1
LIC_RS01005
1
LIC_RS01070
1
LIC_RS01090
1
LIC_RS01095
76
LIC_RS01150
1
LIC_RS01160
1
LIC_RS01205
1
LIC_RS01210
1
LIC_RS01375
1
LIC_RS01380
1
LIC_RS01395 (fusA)
1
LIC_RS01435
1
LIC_RS01495
1
LIC_RS01500
73
LIC_RS01545 (fliE)
1
LIC_RS01550 (flgC)
1
LIC_RS01555 (flgB)
1
LIC_RS01605
1
LIC_RS01610
1
LIC_RS01635
1
LIC_RS01645
1
LIC_RS01660
1
LIC_RS01680
1
LIC_RS01690
1
LIC_RS01745
1
LIC_RS01760
79
LIC_RS01850
1
LIC_RS01855
79
LIC_RS01860
1
LIC_RS01865
1
LIC_RS01870
1
LIC_RS02025
1
LIC_RS02030
1
LIC_RS02035
1
LIC_RS02110
1
LIC_RS02115
1
LIC_RS02120
1
LIC_RS02240
76
LIC_RS02250
58
LIC_RS02255
83
LIC_RS02310
1
LIC_RS02315
1
LIC_RS02325
79
LIC_RS02350
1
LIC_RS02365
1
LIC_RS02455
1
LIC_RS02460
1
LIC_RS02515
1
LIC_RS02520
1
LIC_RS02715
1
LIC_RS02720
1
LIC_RS02725
1
LIC_RS02730 (dnaK)
1
LIC_RS02740
7
LIC_RS02770
1
LIC_RS02780
1
LIC_RS03010
1
LIC_RS03035
74
LIC_RS03110
1
LIC_RS03210
1
LIC_RS03215
7
LIC_RS03220
1
LIC_RS03225
1
LIC_RS03230
1
LIC_RS03235
1
LIC_RS03270
1
LIC_RS03275
1
LIC_RS03500
1
LIC_RS03505
1
LIC_RS03510
1
LIC_RS03515
1
LIC_RS03700
1
LIC_RS03705
1
LIC_RS03820
62
LIC_RS03870
1
LIC_RS03900
82
LIC_RS03955
1
LIC_RS03960
1
LIC_RS03980
1
LIC_RS03990
1
LIC_RS04060
1
LIC_RS04065
1
LIC_RS04070
73
LIC_RS04145
1
LIC_RS04340
1
LIC_RS04345
1
LIC_RS04350
73
LIC_RS04360 (acpS)
1
LIC_RS04365
1
LIC_RS04370
1
LIC_RS04375
1
LIC_RS04385 (tsf)
1
LIC_RS04395 (frr)
1
LIC_RS04400
1
LIC_RS04405
1
LIC_RS04410
1
LIC_RS04415
1
LIC_RS04420
1
LIC_RS04425
1
LIC_RS04430
1
LIC_RS04440
1
LIC_RS04445
1
LIC_RS04450
1
LIC_RS04520
1
LIC_RS04525
1
LIC_RS04530
1
LIC_RS04540
1
LIC_RS04600
1
LIC_RS04605
1
LIC_RS04720
1
x_1
70
LIC_RS05180
1
LIC_RS05185
1
LIC_RS05190
1
LIC_RS05225
1
LIC_RS05230
1
LIC_RS05300
1
LIC_RS05355
1
LIC_RS05360
1
LIC_RS05500
1
LIC_RS05505
1
LIC_RS05530
1
LIC_RS05535
1
LIC_RS05555
1
LIC_RS05725
1
LIC_RS05750
1
LIC_RS05845
1
LIC_RS05850
1
LIC_RS05855
1
LIC_RS05875
1
LIC_RS05880
1
LIC_RS05885
1
LIC_RS06005
1
LIC_RS06015
1
LIC_RS06110
1
LIC_RS06115
1
LIC_RS06140
1
LIC_RS06340
1
LIC_RS06370
1
LIC_RS06375
1
LIC_RS06385
1
LIC_RS06390
1
LIC_RS06395
1
LIC_RS06470
1
LIC_RS06475
1
LIC_RS06480
1
LIC_RS06485
1
LIC_RS06490
1
LIC_RS06510
1
LIC_RS06535
1
LIC_RS06550
1
LIC_RS06555
1
LIC_RS06700
1
LIC_RS06705
1
LIC_RS06740
1
LIC_RS06745
7
LIC_RS06815
1
LIC_RS06825
1
LIC_RS06850 (groEL)
69
LIC_RS06855
1
LIC_RS06950
1
LIC_RS07020
1
LIC_RS07025
1
LIC_RS07035
1
LIC_RS07040
1
LIC_RS07045
1
LIC_RS07055
1
LIC_RS07060
1
LIC_RS07075
1
LIC_RS07080
1
LIC_RS07095
1
LIC_RS07115
1
LIC_RS07125 (fliI)
1
LIC_RS07180
1
LIC_RS07190
1
LIC_RS07195
1
LIC_RS07200
1
LIC_RS07210
1
LIC_RS07215
1
LIC_RS07220
1
LIC_RS07240
1
LIC_RS07260
1
LIC_RS07265
1
LIC_RS07445
1
LIC_RS07450
1
LIC_RS07455
72
LIC_RS07470
1
LIC_RS07475
1
LIC_RS07480
1
LIC_RS07485 (gatA)
73
LIC_RS07490
1
LIC_RS07580
1
LIC_RS07640
1
LIC_RS07680
1
LIC_RS07685
1
LIC_RS07745
1
LIC_RS07760
1
LIC_RS07775
1
LIC_RS07780
1
LIC_RS07795
1
LIC_RS07805
1
LIC_RS07825
1
LIC_RS07855
1
LIC_RS07865
1
LIC_RS07890
1
LIC_RS07895 (pyrG)
1
LIC_RS07900
1
LIC_RS07915
1
LIC_RS07920
1
LIC_RS07925
1
LIC_RS07930
1
LIC_RS07935
1
LIC_RS07940
1
LIC_RS07965
1
LIC_RS07985 (trmD)
1
LIC_RS08040
1
LIC_RS08045
1
LIC_RS08050
1
LIC_RS08055
1
LIC_RS08060
1
LIC_RS08090
1
LIC_RS08145
1
LIC_RS08150
1
LIC_RS08175
1
LIC_RS08180
1
LIC_RS08190
1
LIC_RS08210
1
LIC_RS08220
1
LIC_RS08225
1
LIC_RS08230
1
LIC_RS08265
1
LIC_RS08270
1
LIC_RS08280 (fabG)
1
LIC_RS08300
1
LIC_RS08305
1
LIC_RS08345
1
LIC_RS08405
1
LIC_RS08445
1
LIC_RS08460 (purH)
76
LIC_RS08465
1
LIC_RS08470
1
LIC_RS08500
1
LIC_RS08660
1
LIC_RS08675
77
LIC_RS08685
1
LIC_RS08735
1
LIC_RS08760
1
LIC_RS08930
1
LIC_RS08935
1
LIC_RS08940
1
LIC_RS09020
1
LIC_RS09025
1
LIC_RS09030
1
LIC_RS09065
1
LIC_RS09070
1
LIC_RS09090
72
LIC_RS09105
1
LIC_RS09130
1
LIC_RS09135
1
LIC_RS09145
1
LIC_RS09150
1
LIC_RS09175
1
LIC_RS09200
1
LIC_RS09205
1
LIC_RS09215
1
LIC_RS09230
8
LIC_RS09225
1
LIC_RS09245
1
LIC_RS09250
1
LIC_RS09280
1
LIC_RS09290
1
LIC_RS09305
1
LIC_RS09350
1
LIC_RS09365
1
LIC_RS09380
70
LIC_RS09385
1
LIC_RS09400
1
LIC_RS09405
1
LIC_RS09415
1
LIC_RS09420
1
LIC_RS09450
1
LIC_RS09460
1
LIC_RS09465
1
LIC_RS09470
1
LIC_RS09475
1
LIC_RS09535
1
LIC_RS09545
1
LIC_RS09590
1
LIC_RS09600
1
LIC_RS09605
1
LIC_RS09675
1
LIC_RS09685
1
LIC_RS09785
1
LIC_RS09790
1
LIC_RS09905
1
LIC_RS09920
1
LIC_RS09925
1
LIC_RS09940
1
LIC_RS09945
1
LIC_RS09955
1
LIC_RS10065
1
LIC_RS10090
1
LIC_RS10095
1
LIC_RS10100
1
LIC_RS10215
1
LIC_RS10220 (sdhA)
1
LIC_RS10265
1
LIC_RS10315
1
LIC_RS10345
1
LIC_RS10350
69
LIC_RS10355
1
LIC_RS10360
1
LIC_RS10365
1
LIC_RS10590
1
LIC_RS10595
1
LIC_RS10670
1
LIC_RS10675 (pgk)
1
LIC_RS10705
N
LIC_RS10710
N
LIC_RS10755
1
LIC_RS10765
1
LIC_RS10770
1
LIC_RS10785
1
LIC_RS11310
1
LIC_RS11320
1
LIC_RS11445
1
LIC_RS11460
1
LIC_RS11470
1
LIC_RS11495
79
LIC_RS11500
1
LIC_RS11590
1
LIC_RS11595
1
LIC_RS11625
1
x_2
1
LIC_RS11760
1
LIC_RS11765
1
LIC_RS11770
1
LIC_RS11780
1
LIC_RS11785
1
LIC_RS11805
1
LIC_RS11815
1
LIC_RS11825
1
LIC_RS12210
1
LIC_RS12250
1
LIC_RS12300
1
LIC_RS12325
1
LIC_RS12330
1
LIC_RS12375
1
LIC_RS12485
1
LIC_RS12500
1
LIC_RS12530
1
LIC_RS12540
1
LIC_RS12545
1
LIC_RS12550
1
LIC_RS12555
1
LIC_RS12560
1
LIC_RS12660
1
LIC_RS12665
1
LIC_RS12675
1
LIC_RS12680
1
LIC_RS12770
1
LIC_RS12935
1
LIC_RS12945
1
LIC_RS12980
1
LIC_RS12990
72
LIC_RS12995
1
LIC_RS13010
1
LIC_RS13015
1
LIC_RS13020
1
LIC_RS13025
1
LIC_RS13135
8
LIC_RS13145
1
LIC_RS13170
1
LIC_RS13185
1
LIC_RS13190
1
LIC_RS13195
1
LIC_RS13210
1
LIC_RS13265
1
LIC_RS13405
1
LIC_RS13420
1
LIC_RS13425
1
LIC_RS13470
67
LIC_RS13500
1
LIC_RS13510
1
LIC_RS13515
1
LIC_RS13755
1
LIC_RS13760
1
LIC_RS13855
1
LIC_RS13880
1
LIC_RS13970
1
LIC_RS13975
1
LIC_RS13980
1
LIC_RS14070
1
LIC_RS14075
1
LIC_RS14080
1
LIC_RS14085
1
LIC_RS14090
1
LIC_RS14095
1
LIC_RS14110
1
LIC_RS14115
1
LIC_RS14120
1
LIC_RS14230
1
LIC_RS14300
1
LIC_RS14305
1
LIC_RS14425
1
LIC_RS14430
1
LIC_RS14485
6
LIC_RS14490
1
LIC_RS14520 (gltA)
1
LIC_RS14530
1
LIC_RS14570
1
LIC_RS14615
1
LIC_RS14735 (rplB)
1
LIC_RS14760 (tuf)
1
LIC_RS15120
1
LIC_RS15130
1
LIC_RS15195
75
LIC_RS15200
8
LIC_RS15215
1
LIC_RS15220
1
LIC_RS15250
1
LIC_RS15275
1
LIC_RS15280
1
LIC_RS15510
1
LIC_RS15535
1
LIC_RS15540
1
LIC_RS15925
1
LIC_RS15980
1
LIC_RS16170
1
LIC_RS16175
1
LIC_RS16195
67
LIC_RS16225
1
LIC_RS16230
1
LIC_RS16285
1
LIC_RS16320
1
LIC_RS16350
1
LIC_RS16505
1
LIC_RS16515
1
LIC_RS16565
1
LIC_RS16570
1
LIC_RS16780
1
LIC_RS16785
1
LIC_RS16800
52
LIC_RS16825
N
LIC_RS16830
1
LIC_RS16895
1
LIC_RS16975
76
LIC_RS16980
1
LIC_RS17045
1
LIC_RS17065
1
LIC_RS17070
1
LIC_RS17110 (coaD)
1
LIC_RS17115
1
LIC_RS17180
73
LIC_RS17185
1
LIC_RS17210
1
LIC_RS17225
1
LIC_RS17230
1
LIC_RS17340
1
LIC_RS17345
1
LIC_RS17350
1
LIC_RS17405
1
LIC_RS17410
1
LIC_RS17415
1
LIC_RS17420
1
LIC_RS17445
1
LIC_RS17510
76
LIC_RS17735
1
LIC_RS17740
1
LIC_RS17745
1
LIC_RS17750
1
LIC_RS17790
1
LIC_RS17860
72
LIC_RS17865
1
LIC_RS17870
1
LIC_RS17875
1
LIC_RS17880
1
LIC_RS17890
1
LIC_RS17895
76
LIC_RS17900
1
LIC_RS17905
1
LIC_RS17930
1
LIC_RS17935
1
LIC_RS17965
1
LIC_RS17970
73
LIC_RS18020
1
LIC_RS18025
1
LIC_RS18040
1
LIC_RS18045
1
LIC_RS18075
1
LIC_RS18080
1
LIC_RS18115
1
LIC_RS18170
1
LIC_RS18185
1
LIC_RS18205
1
LIC_RS18310
1
LIC_RS18315
1
LIC_RS18330
1
LIC_RS18335
1
LIC_RS18410
1
LIC_RS18435
1
LIC_RS18440
1
LIC_RS18445
1
LIC_RS18490
1
LIC_RS18495
1
LIC_RS18505
1
LIC_RS18565
1
LIC_RS18695
1
LIC_RS18700
1
LIC_RS18705
1
LIC_RS18710
1
LIC_RS18835
1
LIC_RS19060
1
LIC_RS19065
1
LIC_RS19220
1
LIC_RS19290
1
LIC_RS19305
1
LIC_RS19340
1
LIC_RS19375
1
LIC_RS19385
1
LIC_RS19420
1
LIC_RS19435
1
sender
Auto Definer
curator
Auto Definer
date entered
2017-05-28
datestamp
2017-05-28

Similar profiles (determined by classification schemes)

Experimental schemes are subject to change and are not a stable part of the nomenclature.

Classification schemeClustering methodMismatch thresholdStatusGroup Profiles
Cluster_40_cgMLSTSingle-linkage40experimental6138
Test-110Single-linkage110experimental627
Test-150Single-linkage150experimental629
Test-200Single-linkage200experimental629
Test-220Single-linkage220experimental623
Test-250Single-linkage250experimental623
Test-300Single-linkage300experimental629
Test-50Single-linkage50experimental6138
Test-60Single-linkage60experimental6138
Test-75Single-linkage75experimental623
Test-80Single-linkage80experimental6138

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