Profile information for cgST-5 (cgMLST)
- cgST
- 5
- LIC_RS00025
- 33
- LIC_RS00030
- 33
- LIC_RS00035
- N
- LIC_RS00095
- 32
- LIC_RS00150
- 29
- LIC_RS00160
- 75
- LIC_RS00205
- 33
- LIC_RS00245
- 33
- LIC_RS00260
- 64
- LIC_RS00335
- 31
- LIC_RS00340
- 29
- LIC_RS00355
- 26
- LIC_RS00380
- 30
- LIC_RS00385
- 31
- LIC_RS00525
- 30
- LIC_RS00575
- 29
- LIC_RS00580 (hisH)
- N
- LIC_RS00585
- 30
- LIC_RS00625
- 42
- LIC_RS00655
- 31
- LIC_RS00725
- 31
- LIC_RS00810
- 60
- LIC_RS00815
- 33
- LIC_RS01005
- 32
- LIC_RS01070
- 59
- LIC_RS01090
- 32
- LIC_RS01095
- 32
- LIC_RS01150
- 77
- LIC_RS01160
- 7
- LIC_RS01205
- 4
- LIC_RS01210
- 1
- LIC_RS01375
- 27
- LIC_RS01380
- 32
- LIC_RS01395 (fusA)
- 33
- LIC_RS01435
- 32
- LIC_RS01495
- 1
- LIC_RS01500
- 30
- LIC_RS01545 (fliE)
- 6
- LIC_RS01550 (flgC)
- 26
- LIC_RS01555 (flgB)
- 1
- LIC_RS01605
- 33
- LIC_RS01610
- 28
- LIC_RS01635
- 33
- LIC_RS01645
- 1
- LIC_RS01660
- 1
- LIC_RS01680
- 29
- LIC_RS01690
- 65
- LIC_RS01745
- 29
- LIC_RS01760
- 78
- LIC_RS01850
- 32
- LIC_RS01855
- 35
- LIC_RS01860
- 29
- LIC_RS01865
- 33
- LIC_RS01870
- 30
- LIC_RS02025
- 4
- LIC_RS02030
- 33
- LIC_RS02035
- 25
- LIC_RS02110
- 31
- LIC_RS02115
- 31
- LIC_RS02120
- 36
- LIC_RS02240
- 7
- LIC_RS02250
- 5
- LIC_RS02255
- 82
- LIC_RS02310
- 28
- LIC_RS02315
- 29
- LIC_RS02325
- 36
- LIC_RS02350
- 27
- LIC_RS02365
- 29
- LIC_RS02455
- 32
- LIC_RS02460
- 34
- LIC_RS02515
- 34
- LIC_RS02520
- N
- LIC_RS02715
- 27
- LIC_RS02720
- 1
- LIC_RS02725
- 30
- LIC_RS02730 (dnaK)
- 34
- LIC_RS02740
- 31
- LIC_RS02770
- 33
- LIC_RS02780
- 31
- LIC_RS03010
- 73
- LIC_RS03035
- 73
- LIC_RS03110
- 31
- LIC_RS03210
- 27
- LIC_RS03215
- 34
- LIC_RS03220
- 32
- LIC_RS03225
- 30
- LIC_RS03230
- 33
- LIC_RS03235
- 52
- LIC_RS03270
- 26
- LIC_RS03275
- 32
- LIC_RS03500
- 31
- LIC_RS03505
- 31
- LIC_RS03510
- 6
- LIC_RS03515
- 30
- LIC_RS03700
- 33
- LIC_RS03705
- 31
- LIC_RS03820
- 61
- LIC_RS03870
- 26
- LIC_RS03900
- 35
- LIC_RS03955
- 74
- LIC_RS03960
- 58
- LIC_RS03980
- 69
- LIC_RS03990
- 58
- LIC_RS04060
- 30
- LIC_RS04065
- 1
- LIC_RS04070
- 32
- LIC_RS04145
- 30
- LIC_RS04340
- 29
- LIC_RS04345
- 73
- LIC_RS04350
- 71
- LIC_RS04360 (acpS)
- 1
- LIC_RS04365
- 1
- LIC_RS04370
- 26
- LIC_RS04375
- 1
- LIC_RS04385 (tsf)
- 31
- LIC_RS04395 (frr)
- 30
- LIC_RS04400
- 65
- LIC_RS04405
- 31
- LIC_RS04410
- 31
- LIC_RS04415
- 32
- LIC_RS04420
- 80
- LIC_RS04425
- 30
- LIC_RS04430
- 30
- LIC_RS04440
- 74
- LIC_RS04445
- 76
- LIC_RS04450
- 30
- LIC_RS04520
- 74
- LIC_RS04525
- 33
- LIC_RS04530
- 32
- LIC_RS04540
- 30
- LIC_RS04600
- 53
- LIC_RS04605
- 1
- LIC_RS04720
- 64
- x_1
- 29
- LIC_RS05180
- 1
- LIC_RS05185
- 32
- LIC_RS05190
- 32
- LIC_RS05225
- 66
- LIC_RS05230
- 30
- LIC_RS05300
- 1
- LIC_RS05355
- 31
- LIC_RS05360
- 34
- LIC_RS05500
- 32
- LIC_RS05505
- 32
- LIC_RS05530
- 29
- LIC_RS05535
- 1
- LIC_RS05555
- 33
- LIC_RS05725
- 32
- LIC_RS05750
- 28
- LIC_RS05845
- 30
- LIC_RS05850
- 41
- LIC_RS05855
- 69
- LIC_RS05875
- 75
- LIC_RS05880
- 32
- LIC_RS05885
- 7
- LIC_RS06005
- 30
- LIC_RS06015
- 1
- LIC_RS06110
- 30
- LIC_RS06115
- 32
- LIC_RS06140
- 66
- LIC_RS06340
- 29
- LIC_RS06370
- 24
- LIC_RS06375
- 28
- LIC_RS06385
- 34
- LIC_RS06390
- 45
- LIC_RS06395
- 33
- LIC_RS06470
- 6
- LIC_RS06475
- 31
- LIC_RS06480
- 32
- LIC_RS06485
- 66
- LIC_RS06490
- 31
- LIC_RS06510
- 24
- LIC_RS06535
- 67
- LIC_RS06550
- N
- LIC_RS06555
- 33
- LIC_RS06700
- 31
- LIC_RS06705
- 33
- LIC_RS06740
- 1
- LIC_RS06745
- N
- LIC_RS06815
- 1
- LIC_RS06825
- 32
- LIC_RS06850 (groEL)
- 27
- LIC_RS06855
- 41
- LIC_RS06950
- 1
- LIC_RS07020
- 61
- LIC_RS07025
- 32
- LIC_RS07035
- 30
- LIC_RS07040
- 28
- LIC_RS07045
- 64
- LIC_RS07055
- 30
- LIC_RS07060
- 72
- LIC_RS07075
- 50
- LIC_RS07080
- 34
- LIC_RS07095
- 25
- LIC_RS07115
- 57
- LIC_RS07125 (fliI)
- 35
- LIC_RS07180
- 64
- LIC_RS07190
- 73
- LIC_RS07195
- 72
- LIC_RS07200
- 1
- LIC_RS07210
- N
- LIC_RS07215
- 33
- LIC_RS07220
- 30
- LIC_RS07240
- 32
- LIC_RS07260
- 31
- LIC_RS07265
- 29
- LIC_RS07445
- 31
- LIC_RS07450
- 7
- LIC_RS07455
- 71
- LIC_RS07470
- 31
- LIC_RS07475
- 64
- LIC_RS07480
- 28
- LIC_RS07485 (gatA)
- 32
- LIC_RS07490
- 30
- LIC_RS07580
- 29
- LIC_RS07640
- 58
- LIC_RS07680
- 23
- LIC_RS07685
- 31
- LIC_RS07745
- 1
- LIC_RS07760
- 4
- LIC_RS07775
- 32
- LIC_RS07780
- 72
- LIC_RS07795
- 27
- LIC_RS07805
- 1
- LIC_RS07825
- 29
- LIC_RS07855
- 30
- LIC_RS07865
- 30
- LIC_RS07890
- 64
- LIC_RS07895 (pyrG)
- 31
- LIC_RS07900
- 28
- LIC_RS07915
- 30
- LIC_RS07920
- 32
- LIC_RS07925
- 30
- LIC_RS07930
- 1
- LIC_RS07935
- 33
- LIC_RS07940
- 33
- LIC_RS07965
- 29
- LIC_RS07985 (trmD)
- 29
- LIC_RS08040
- 29
- LIC_RS08045
- 74
- LIC_RS08050
- 71
- LIC_RS08055
- 31
- LIC_RS08060
- 27
- LIC_RS08090
- 29
- LIC_RS08145
- 62
- LIC_RS08150
- 61
- LIC_RS08175
- 35
- LIC_RS08180
- 29
- LIC_RS08190
- 28
- LIC_RS08210
- 65
- LIC_RS08220
- 31
- LIC_RS08225
- 32
- LIC_RS08230
- 29
- LIC_RS08265
- 36
- LIC_RS08270
- 59
- LIC_RS08280 (fabG)
- 33
- LIC_RS08300
- 32
- LIC_RS08305
- 25
- LIC_RS08345
- 77
- LIC_RS08405
- 29
- LIC_RS08445
- 32
- LIC_RS08460 (purH)
- 75
- LIC_RS08465
- 27
- LIC_RS08470
- 29
- LIC_RS08500
- 1
- LIC_RS08660
- 69
- LIC_RS08675
- 32
- LIC_RS08685
- 28
- LIC_RS08735
- 30
- LIC_RS08760
- 73
- LIC_RS08930
- 32
- LIC_RS08935
- 68
- LIC_RS08940
- 62
- LIC_RS09020
- 35
- LIC_RS09025
- 32
- LIC_RS09030
- 29
- LIC_RS09065
- 1
- LIC_RS09070
- 63
- LIC_RS09090
- 33
- LIC_RS09105
- 68
- LIC_RS09130
- 61
- LIC_RS09135
- 32
- LIC_RS09145
- 76
- LIC_RS09150
- 61
- LIC_RS09175
- 74
- LIC_RS09200
- 1
- LIC_RS09205
- 32
- LIC_RS09215
- 1
- LIC_RS09230
- 33
- LIC_RS09225
- N
- LIC_RS09245
- 32
- LIC_RS09250
- 47
- LIC_RS09280
- 32
- LIC_RS09290
- 31
- LIC_RS09305
- 29
- LIC_RS09350
- 3
- LIC_RS09365
- 70
- LIC_RS09380
- 31
- LIC_RS09385
- 68
- LIC_RS09400
- 32
- LIC_RS09405
- 33
- LIC_RS09415
- 65
- LIC_RS09420
- 1
- LIC_RS09450
- 29
- LIC_RS09460
- 67
- LIC_RS09465
- N
- LIC_RS09470
- 30
- LIC_RS09475
- 26
- LIC_RS09535
- 67
- LIC_RS09545
- 63
- LIC_RS09590
- 32
- LIC_RS09600
- 31
- LIC_RS09605
- 29
- LIC_RS09675
- 32
- LIC_RS09685
- 32
- LIC_RS09785
- 31
- LIC_RS09790
- 32
- LIC_RS09905
- 33
- LIC_RS09920
- 72
- LIC_RS09925
- 65
- LIC_RS09940
- 27
- LIC_RS09945
- 32
- LIC_RS09955
- 28
- LIC_RS10065
- 1
- LIC_RS10090
- 29
- LIC_RS10095
- 33
- LIC_RS10100
- 26
- LIC_RS10215
- 27
- LIC_RS10220 (sdhA)
- 33
- LIC_RS10265
- 75
- LIC_RS10315
- 31
- LIC_RS10345
- 32
- LIC_RS10350
- 32
- LIC_RS10355
- 6
- LIC_RS10360
- 32
- LIC_RS10365
- 9
- LIC_RS10590
- 27
- LIC_RS10595
- 29
- LIC_RS10670
- 29
- LIC_RS10675 (pgk)
- N
- LIC_RS10705
- 32
- LIC_RS10710
- 67
- LIC_RS10755
- 31
- LIC_RS10765
- 32
- LIC_RS10770
- 33
- LIC_RS10785
- 28
- LIC_RS11310
- 31
- LIC_RS11320
- 77
- LIC_RS11445
- 28
- LIC_RS11460
- 62
- LIC_RS11470
- 25
- LIC_RS11495
- 78
- LIC_RS11500
- 31
- LIC_RS11590
- 76
- LIC_RS11595
- 32
- LIC_RS11625
- 63
- x_2
- 30
- LIC_RS11760
- 7
- LIC_RS11765
- 32
- LIC_RS11770
- 30
- LIC_RS11780
- 1
- LIC_RS11785
- 30
- LIC_RS11805
- 33
- LIC_RS11815
- 34
- LIC_RS11825
- 6
- LIC_RS12210
- 4
- LIC_RS12250
- 30
- LIC_RS12300
- 30
- LIC_RS12325
- 71
- LIC_RS12330
- 75
- LIC_RS12375
- 70
- LIC_RS12485
- 31
- LIC_RS12500
- 30
- LIC_RS12530
- 70
- LIC_RS12540
- 52
- LIC_RS12545
- 1
- LIC_RS12550
- 32
- LIC_RS12555
- 65
- LIC_RS12560
- 30
- LIC_RS12660
- 32
- LIC_RS12665
- 34
- LIC_RS12675
- 31
- LIC_RS12680
- 74
- LIC_RS12770
- 32
- LIC_RS12935
- 58
- LIC_RS12945
- 71
- LIC_RS12980
- 30
- LIC_RS12990
- 29
- LIC_RS12995
- 30
- LIC_RS13010
- 33
- LIC_RS13015
- 30
- LIC_RS13020
- 34
- LIC_RS13025
- 33
- LIC_RS13135
- 31
- LIC_RS13145
- 70
- LIC_RS13170
- 28
- LIC_RS13185
- 33
- LIC_RS13190
- 35
- LIC_RS13195
- 34
- LIC_RS13210
- 26
- LIC_RS13265
- N
- LIC_RS13405
- 32
- LIC_RS13420
- 4
- LIC_RS13425
- 74
- LIC_RS13470
- 31
- LIC_RS13500
- 34
- LIC_RS13510
- 32
- LIC_RS13515
- 26
- LIC_RS13755
- N
- LIC_RS13760
- 33
- LIC_RS13855
- 33
- LIC_RS13880
- 65
- LIC_RS13970
- 65
- LIC_RS13975
- 30
- LIC_RS13980
- 29
- LIC_RS14070
- 29
- LIC_RS14075
- 68
- LIC_RS14080
- 34
- LIC_RS14085
- 70
- LIC_RS14090
- 31
- LIC_RS14095
- 63
- LIC_RS14110
- 30
- LIC_RS14115
- 30
- LIC_RS14120
- 31
- LIC_RS14230
- 73
- LIC_RS14300
- 71
- LIC_RS14305
- 53
- LIC_RS14425
- 30
- LIC_RS14430
- 32
- LIC_RS14485
- 29
- LIC_RS14490
- 29
- LIC_RS14520 (gltA)
- 33
- LIC_RS14530
- 21
- LIC_RS14570
- 32
- LIC_RS14615
- 34
- LIC_RS14735 (rplB)
- 34
- LIC_RS14760 (tuf)
- 34
- LIC_RS15120
- 32
- LIC_RS15130
- 1
- LIC_RS15195
- 74
- LIC_RS15200
- 62
- LIC_RS15215
- 1
- LIC_RS15220
- 31
- LIC_RS15250
- 30
- LIC_RS15275
- 30
- LIC_RS15280
- 30
- LIC_RS15510
- 33
- LIC_RS15535
- 28
- LIC_RS15540
- 31
- LIC_RS15925
- 28
- LIC_RS15980
- 75
- LIC_RS16170
- 30
- LIC_RS16175
- 29
- LIC_RS16195
- 32
- LIC_RS16225
- 59
- LIC_RS16230
- 32
- LIC_RS16285
- 32
- LIC_RS16320
- 64
- LIC_RS16350
- 1
- LIC_RS16505
- 29
- LIC_RS16515
- 29
- LIC_RS16565
- 29
- LIC_RS16570
- 34
- LIC_RS16780
- 35
- LIC_RS16785
- 32
- LIC_RS16800
- 46
- LIC_RS16825
- 25
- LIC_RS16830
- 30
- LIC_RS16895
- 31
- LIC_RS16975
- 74
- LIC_RS16980
- 32
- LIC_RS17045
- 66
- LIC_RS17065
- 30
- LIC_RS17070
- 31
- LIC_RS17110 (coaD)
- 30
- LIC_RS17115
- 28
- LIC_RS17180
- 33
- LIC_RS17185
- N
- LIC_RS17210
- 66
- LIC_RS17225
- 64
- LIC_RS17230
- 70
- LIC_RS17340
- 33
- LIC_RS17345
- 32
- LIC_RS17350
- 1
- LIC_RS17405
- 33
- LIC_RS17410
- 76
- LIC_RS17415
- 34
- LIC_RS17420
- 29
- LIC_RS17445
- 1
- LIC_RS17510
- 75
- LIC_RS17735
- 20
- LIC_RS17740
- 4
- LIC_RS17745
- 32
- LIC_RS17750
- 34
- LIC_RS17790
- 28
- LIC_RS17860
- 65
- LIC_RS17865
- 1
- LIC_RS17870
- 58
- LIC_RS17875
- 36
- LIC_RS17880
- N
- LIC_RS17890
- 74
- LIC_RS17895
- 33
- LIC_RS17900
- 71
- LIC_RS17905
- 28
- LIC_RS17930
- 73
- LIC_RS17935
- 59
- LIC_RS17965
- 32
- LIC_RS17970
- 30
- LIC_RS18020
- 60
- LIC_RS18025
- 74
- LIC_RS18040
- 74
- LIC_RS18045
- 64
- LIC_RS18075
- 32
- LIC_RS18080
- 56
- LIC_RS18115
- 70
- LIC_RS18170
- 24
- LIC_RS18185
- 32
- LIC_RS18205
- 68
- LIC_RS18310
- 29
- LIC_RS18315
- 1
- LIC_RS18330
- 32
- LIC_RS18335
- 31
- LIC_RS18410
- 74
- LIC_RS18435
- 65
- LIC_RS18440
- 67
- LIC_RS18445
- 31
- LIC_RS18490
- 5
- LIC_RS18495
- 70
- LIC_RS18505
- 63
- LIC_RS18565
- 27
- LIC_RS18695
- 66
- LIC_RS18700
- 34
- LIC_RS18705
- 34
- LIC_RS18710
- 36
- LIC_RS18835
- 31
- LIC_RS19060
- 31
- LIC_RS19065
- 28
- LIC_RS19220
- 6
- LIC_RS19290
- 33
- LIC_RS19305
- 29
- LIC_RS19340
- 48
- LIC_RS19375
- 30
- LIC_RS19385
- 30
- LIC_RS19420
- 61
- LIC_RS19435
- 7
- sender
- Auto Definer
- curator
- Auto Definer
- date entered
- 2017-05-28
- datestamp
- 2017-05-28
Similar profiles (determined by classification schemes)
Experimental schemes are subject to change and are not a stable part of the nomenclature.
| Classification scheme | Clustering method | Mismatch threshold | Status | Group | Profiles |
|---|---|---|---|---|---|
| Cluster_40_cgMLST | Single-linkage | 40 | experimental | 5 | 100 |
| Test-10 | Single-linkage | 10 | experimental | 118 | 20 |
| Test-110 | Single-linkage | 110 | experimental | 5 | 32 |
| Test-150 | Single-linkage | 150 | experimental | 5 | 32 |
| Test-20 | Single-linkage | 20 | experimental | 5 | 32 |
| Test-200 | Single-linkage | 200 | experimental | 5 | 35 |
| Test-220 | Single-linkage | 220 | experimental | 5 | 27 |
| Test-250 | Single-linkage | 250 | experimental | 5 | 37 |
| Test-30 | Single-linkage | 30 | experimental | 5 | 97 |
| Test-300 | Single-linkage | 300 | experimental | 5 | 68 |
| Test-50 | Single-linkage | 50 | experimental | 5 | 100 |
| Test-60 | Single-linkage | 60 | experimental | 5 | 100 |
| Test-75 | Single-linkage | 75 | experimental | 5 | 27 |
| Test-80 | Single-linkage | 80 | experimental | 5 | 100 |
Tools
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