Profile information for cgST-39 (cgMLST)

cgST
39
LIC_RS00025
87
LIC_RS00030
89
LIC_RS00035
83
LIC_RS00095
82
LIC_RS00150
29
LIC_RS00160
83
LIC_RS00205
N
LIC_RS00245
85
LIC_RS00260
70
LIC_RS00335
1
LIC_RS00340
72
LIC_RS00355
26
LIC_RS00380
1
LIC_RS00385
72
LIC_RS00525
80
LIC_RS00575
1
LIC_RS00580 (hisH)
1
LIC_RS00585
1
LIC_RS00625
54
LIC_RS00655
N
LIC_RS00725
82
LIC_RS00810
67
LIC_RS00815
88
LIC_RS01005
77
LIC_RS01070
1
LIC_RS01090
78
LIC_RS01095
6
LIC_RS01150
89
LIC_RS01160
63
LIC_RS01205
76
LIC_RS01210
64
LIC_RS01375
4
LIC_RS01380
1
LIC_RS01395 (fusA)
90
LIC_RS01435
N
LIC_RS01495
1
LIC_RS01500
82
LIC_RS01545 (fliE)
36
LIC_RS01550 (flgC)
63
LIC_RS01555 (flgB)
1
LIC_RS01605
90
LIC_RS01610
65
LIC_RS01635
N
LIC_RS01645
1
LIC_RS01660
1
LIC_RS01680
75
LIC_RS01690
1
LIC_RS01745
86
LIC_RS01760
N
LIC_RS01850
84
LIC_RS01855
87
LIC_RS01860
29
LIC_RS01865
81
LIC_RS01870
7
LIC_RS02025
4
LIC_RS02030
90
LIC_RS02035
25
LIC_RS02110
31
LIC_RS02115
31
LIC_RS02120
80
LIC_RS02240
78
LIC_RS02250
1
LIC_RS02255
N
LIC_RS02310
83
LIC_RS02315
N
LIC_RS02325
92
LIC_RS02350
64
LIC_RS02365
N
LIC_RS02455
83
LIC_RS02460
86
LIC_RS02515
87
LIC_RS02520
1
LIC_RS02715
68
LIC_RS02720
1
LIC_RS02725
1
LIC_RS02730 (dnaK)
89
LIC_RS02740
77
LIC_RS02770
73
LIC_RS02780
N
LIC_RS03010
78
LIC_RS03035
N
LIC_RS03110
56
LIC_RS03210
4
LIC_RS03215
74
LIC_RS03220
79
LIC_RS03225
72
LIC_RS03230
83
LIC_RS03235
51
LIC_RS03270
1
LIC_RS03275
N
LIC_RS03500
79
LIC_RS03505
63
LIC_RS03510
1
LIC_RS03515
60
LIC_RS03700
86
LIC_RS03705
90
LIC_RS03820
1
LIC_RS03870
26
LIC_RS03900
95
LIC_RS03955
84
LIC_RS03960
64
LIC_RS03980
80
LIC_RS03990
73
LIC_RS04060
60
LIC_RS04065
60
LIC_RS04070
87
LIC_RS04145
60
LIC_RS04340
82
LIC_RS04345
1
LIC_RS04350
N
LIC_RS04360 (acpS)
1
LIC_RS04365
49
LIC_RS04370
49
LIC_RS04375
1
LIC_RS04385 (tsf)
31
LIC_RS04395 (frr)
30
LIC_RS04400
65
LIC_RS04405
31
LIC_RS04410
63
LIC_RS04415
N
LIC_RS04420
93
LIC_RS04425
82
LIC_RS04430
74
LIC_RS04440
N
LIC_RS04445
86
LIC_RS04450
52
LIC_RS04520
87
LIC_RS04525
91
LIC_RS04530
73
LIC_RS04540
82
LIC_RS04600
1
LIC_RS04605
60
LIC_RS04720
62
x_1
68
LIC_RS05180
41
LIC_RS05185
79
LIC_RS05190
63
LIC_RS05225
66
LIC_RS05230
82
LIC_RS05300
1
LIC_RS05355
85
LIC_RS05360
88
LIC_RS05500
6
LIC_RS05505
N
LIC_RS05530
75
LIC_RS05535
4
LIC_RS05555
33
LIC_RS05725
72
LIC_RS05750
6
LIC_RS05845
30
LIC_RS05850
1
LIC_RS05855
N
LIC_RS05875
86
LIC_RS05880
72
LIC_RS05885
85
LIC_RS06005
6
LIC_RS06015
75
LIC_RS06110
84
LIC_RS06115
83
LIC_RS06140
75
LIC_RS06340
N
LIC_RS06370
1
LIC_RS06375
59
LIC_RS06385
90
LIC_RS06390
68
LIC_RS06395
33
LIC_RS06470
71
LIC_RS06475
71
LIC_RS06480
88
LIC_RS06485
58
LIC_RS06490
66
LIC_RS06510
1
LIC_RS06535
80
LIC_RS06550
73
LIC_RS06555
82
LIC_RS06700
71
LIC_RS06705
87
LIC_RS06740
55
LIC_RS06745
70
LIC_RS06815
1
LIC_RS06825
83
LIC_RS06850 (groEL)
81
LIC_RS06855
1
LIC_RS06950
78
LIC_RS07020
57
LIC_RS07025
79
LIC_RS07035
78
LIC_RS07040
1
LIC_RS07045
67
LIC_RS07055
86
LIC_RS07060
N
LIC_RS07075
N
LIC_RS07080
N
LIC_RS07095
54
LIC_RS07115
N
LIC_RS07125 (fliI)
N
LIC_RS07180
N
LIC_RS07190
72
LIC_RS07195
81
LIC_RS07200
1
LIC_RS07210
47
LIC_RS07215
87
LIC_RS07220
67
LIC_RS07240
32
LIC_RS07260
70
LIC_RS07265
29
LIC_RS07445
31
LIC_RS07450
7
LIC_RS07455
N
LIC_RS07470
81
LIC_RS07475
74
LIC_RS07480
28
LIC_RS07485 (gatA)
84
LIC_RS07490
70
LIC_RS07580
60
LIC_RS07640
N
LIC_RS07680
1
LIC_RS07685
1
LIC_RS07745
1
LIC_RS07760
4
LIC_RS07775
74
LIC_RS07780
86
LIC_RS07795
70
LIC_RS07805
1
LIC_RS07825
1
LIC_RS07855
66
LIC_RS07865
73
LIC_RS07890
70
LIC_RS07895 (pyrG)
79
LIC_RS07900
75
LIC_RS07915
30
LIC_RS07920
N
LIC_RS07925
73
LIC_RS07930
N
LIC_RS07935
N
LIC_RS07940
84
LIC_RS07965
29
LIC_RS07985 (trmD)
72
LIC_RS08040
1
LIC_RS08045
N
LIC_RS08050
N
LIC_RS08055
83
LIC_RS08060
N
LIC_RS08090
N
LIC_RS08145
N
LIC_RS08150
N
LIC_RS08175
N
LIC_RS08180
N
LIC_RS08190
1
LIC_RS08210
N
LIC_RS08220
66
LIC_RS08225
47
LIC_RS08230
42
LIC_RS08265
87
LIC_RS08270
N
LIC_RS08280 (fabG)
33
LIC_RS08300
32
LIC_RS08305
N
LIC_RS08345
N
LIC_RS08405
76
LIC_RS08445
76
LIC_RS08460 (purH)
87
LIC_RS08465
N
LIC_RS08470
1
LIC_RS08500
58
LIC_RS08660
77
LIC_RS08675
32
LIC_RS08685
28
LIC_RS08735
N
LIC_RS08760
N
LIC_RS08930
70
LIC_RS08935
N
LIC_RS08940
N
LIC_RS09020
88
LIC_RS09025
83
LIC_RS09030
58
LIC_RS09065
1
LIC_RS09070
N
LIC_RS09090
71
LIC_RS09105
6
LIC_RS09130
N
LIC_RS09135
87
LIC_RS09145
83
LIC_RS09150
N
LIC_RS09175
N
LIC_RS09200
70
LIC_RS09205
N
LIC_RS09215
1
LIC_RS09230
N
LIC_RS09225
56
LIC_RS09245
N
LIC_RS09250
5
LIC_RS09280
74
LIC_RS09290
45
LIC_RS09305
4
LIC_RS09350
3
LIC_RS09365
78
LIC_RS09380
N
LIC_RS09385
N
LIC_RS09400
64
LIC_RS09405
85
LIC_RS09415
72
LIC_RS09420
72
LIC_RS09450
N
LIC_RS09460
N
LIC_RS09465
N
LIC_RS09470
N
LIC_RS09475
N
LIC_RS09535
N
LIC_RS09545
N
LIC_RS09590
N
LIC_RS09600
N
LIC_RS09605
29
LIC_RS09675
1
LIC_RS09685
N
LIC_RS09785
31
LIC_RS09790
N
LIC_RS09905
84
LIC_RS09920
72
LIC_RS09925
65
LIC_RS09940
N
LIC_RS09945
N
LIC_RS09955
53
LIC_RS10065
1
LIC_RS10090
69
LIC_RS10095
86
LIC_RS10100
1
LIC_RS10215
1
LIC_RS10220 (sdhA)
87
LIC_RS10265
84
LIC_RS10315
81
LIC_RS10345
62
LIC_RS10350
77
LIC_RS10355
6
LIC_RS10360
N
LIC_RS10365
N
LIC_RS10590
27
LIC_RS10595
29
LIC_RS10670
68
LIC_RS10675 (pgk)
67
LIC_RS10705
32
LIC_RS10710
57
LIC_RS10755
N
LIC_RS10765
72
LIC_RS10770
74
LIC_RS10785
57
LIC_RS11310
31
LIC_RS11320
N
LIC_RS11445
28
LIC_RS11460
62
LIC_RS11470
N
LIC_RS11495
92
LIC_RS11500
31
LIC_RS11590
66
LIC_RS11595
73
LIC_RS11625
72
x_2
30
LIC_RS11760
7
LIC_RS11765
75
LIC_RS11770
77
LIC_RS11780
1
LIC_RS11785
30
LIC_RS11805
81
LIC_RS11815
68
LIC_RS11825
51
LIC_RS12210
4
LIC_RS12250
80
LIC_RS12300
78
LIC_RS12325
83
LIC_RS12330
N
LIC_RS12375
70
LIC_RS12485
78
LIC_RS12500
30
LIC_RS12530
N
LIC_RS12540
52
LIC_RS12545
1
LIC_RS12550
72
LIC_RS12555
79
LIC_RS12560
55
LIC_RS12660
88
LIC_RS12665
89
LIC_RS12675
1
LIC_RS12680
N
LIC_RS12770
79
LIC_RS12935
75
LIC_RS12945
N
LIC_RS12980
67
LIC_RS12990
29
LIC_RS12995
80
LIC_RS13010
67
LIC_RS13015
30
LIC_RS13020
86
LIC_RS13025
33
LIC_RS13135
81
LIC_RS13145
80
LIC_RS13170
79
LIC_RS13185
33
LIC_RS13190
35
LIC_RS13195
34
LIC_RS13210
26
LIC_RS13265
74
LIC_RS13405
79
LIC_RS13420
1
LIC_RS13425
71
LIC_RS13470
65
LIC_RS13500
85
LIC_RS13510
79
LIC_RS13515
4
LIC_RS13755
N
LIC_RS13760
7
LIC_RS13855
87
LIC_RS13880
74
LIC_RS13970
N
LIC_RS13975
N
LIC_RS13980
N
LIC_RS14070
29
LIC_RS14075
N
LIC_RS14080
91
LIC_RS14085
1
LIC_RS14090
1
LIC_RS14095
63
LIC_RS14110
86
LIC_RS14115
85
LIC_RS14120
80
LIC_RS14230
N
LIC_RS14300
70
LIC_RS14305
38
LIC_RS14425
81
LIC_RS14430
81
LIC_RS14485
62
LIC_RS14490
74
LIC_RS14520 (gltA)
1
LIC_RS14530
64
LIC_RS14570
77
LIC_RS14615
80
LIC_RS14735 (rplB)
78
LIC_RS14760 (tuf)
77
LIC_RS15120
90
LIC_RS15130
N
LIC_RS15195
62
LIC_RS15200
7
LIC_RS15215
1
LIC_RS15220
63
LIC_RS15250
76
LIC_RS15275
83
LIC_RS15280
79
LIC_RS15510
79
LIC_RS15535
1
LIC_RS15540
80
LIC_RS15925
1
LIC_RS15980
N
LIC_RS16170
75
LIC_RS16175
80
LIC_RS16195
1
LIC_RS16225
66
LIC_RS16230
76
LIC_RS16285
1
LIC_RS16320
79
LIC_RS16350
1
LIC_RS16505
71
LIC_RS16515
83
LIC_RS16565
N
LIC_RS16570
N
LIC_RS16780
80
LIC_RS16785
77
LIC_RS16800
46
LIC_RS16825
71
LIC_RS16830
65
LIC_RS16895
N
LIC_RS16975
65
LIC_RS16980
84
LIC_RS17045
58
LIC_RS17065
30
LIC_RS17070
31
LIC_RS17110 (coaD)
30
LIC_RS17115
28
LIC_RS17180
83
LIC_RS17185
N
LIC_RS17210
N
LIC_RS17225
73
LIC_RS17230
N
LIC_RS17340
88
LIC_RS17345
85
LIC_RS17350
75
LIC_RS17405
33
LIC_RS17410
76
LIC_RS17415
34
LIC_RS17420
29
LIC_RS17445
25
LIC_RS17510
N
LIC_RS17735
27
LIC_RS17740
4
LIC_RS17745
79
LIC_RS17750
89
LIC_RS17790
4
LIC_RS17860
65
LIC_RS17865
60
LIC_RS17870
71
LIC_RS17875
96
LIC_RS17880
N
LIC_RS17890
N
LIC_RS17895
85
LIC_RS17900
N
LIC_RS17905
49
LIC_RS17930
81
LIC_RS17935
N
LIC_RS17965
87
LIC_RS17970
79
LIC_RS18020
60
LIC_RS18025
65
LIC_RS18040
84
LIC_RS18045
N
LIC_RS18075
N
LIC_RS18080
56
LIC_RS18115
N
LIC_RS18170
54
LIC_RS18185
N
LIC_RS18205
74
LIC_RS18310
73
LIC_RS18315
1
LIC_RS18330
83
LIC_RS18335
74
LIC_RS18410
N
LIC_RS18435
81
LIC_RS18440
N
LIC_RS18445
76
LIC_RS18490
1
LIC_RS18495
N
LIC_RS18505
N
LIC_RS18565
N
LIC_RS18695
N
LIC_RS18700
N
LIC_RS18705
88
LIC_RS18710
78
LIC_RS18835
N
LIC_RS19060
88
LIC_RS19065
28
LIC_RS19220
76
LIC_RS19290
78
LIC_RS19305
N
LIC_RS19340
48
LIC_RS19375
76
LIC_RS19385
30
LIC_RS19420
68
LIC_RS19435
N
sender
Auto Definer
curator
Auto Definer
date entered
2017-05-28
datestamp
2017-05-28

Similar profiles (determined by classification schemes)

Experimental schemes are subject to change and are not a stable part of the nomenclature.

Classification schemeClustering methodMismatch thresholdStatusGroup Profiles
Cluster_40_cgMLSTSingle-linkage40experimental306
Test-110Single-linkage110experimental284
Test-150Single-linkage150experimental274
Test-20Single-linkage20experimental314
Test-200Single-linkage200experimental274
Test-220Single-linkage220experimental272
Test-250Single-linkage250experimental262
Test-30Single-linkage30experimental306
Test-300Single-linkage300experimental211
Test-50Single-linkage50experimental296
Test-60Single-linkage60experimental296
Test-75Single-linkage75experimental292
Test-80Single-linkage80experimental286

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