Profile information for cgST-258 (cgMLST)

cgST
258
LIC_RS00025
7
LIC_RS00030
12
LIC_RS00035
7
LIC_RS00095
8
LIC_RS00150
6
LIC_RS00160
8
LIC_RS00205
11
LIC_RS00245
12
LIC_RS00260
7
LIC_RS00335
6
LIC_RS00340
7
LIC_RS00355
6
LIC_RS00380
8
LIC_RS00385
7
LIC_RS00525
7
LIC_RS00575
7
LIC_RS00580 (hisH)
7
LIC_RS00585
7
LIC_RS00625
7
LIC_RS00655
7
LIC_RS00725
8
LIC_RS00810
7
LIC_RS00815
8
LIC_RS01005
12
LIC_RS01070
7
LIC_RS01090
8
LIC_RS01095
8
LIC_RS01150
7
LIC_RS01160
8
LIC_RS01205
8
LIC_RS01210
7
LIC_RS01375
7
LIC_RS01380
8
LIC_RS01395 (fusA)
7
LIC_RS01435
7
LIC_RS01495
5
LIC_RS01500
7
LIC_RS01545 (fliE)
7
LIC_RS01550 (flgC)
6
LIC_RS01555 (flgB)
6
LIC_RS01605
8
LIC_RS01610
7
LIC_RS01635
7
LIC_RS01645
5
LIC_RS01660
5
LIC_RS01680
5
LIC_RS01690
7
LIC_RS01745
8
LIC_RS01760
7
LIC_RS01850
10
LIC_RS01855
8
LIC_RS01860
7
LIC_RS01865
7
LIC_RS01870
8
LIC_RS02025
7
LIC_RS02030
7
LIC_RS02035
7
LIC_RS02110
7
LIC_RS02115
7
LIC_RS02120
8
LIC_RS02240
13
LIC_RS02250
6
LIC_RS02255
8
LIC_RS02310
7
LIC_RS02315
7
LIC_RS02325
14
LIC_RS02350
7
LIC_RS02365
8
LIC_RS02455
12
LIC_RS02460
12
LIC_RS02515
8
LIC_RS02520
6
LIC_RS02715
7
LIC_RS02720
10
LIC_RS02725
7
LIC_RS02730 (dnaK)
8
LIC_RS02740
8
LIC_RS02770
7
LIC_RS02780
8
LIC_RS03010
8
LIC_RS03035
9
LIC_RS03110
6
LIC_RS03210
7
LIC_RS03215
8
LIC_RS03220
8
LIC_RS03225
7
LIC_RS03230
8
LIC_RS03235
7
LIC_RS03270
6
LIC_RS03275
7
LIC_RS03500
6
LIC_RS03505
6
LIC_RS03510
7
LIC_RS03515
7
LIC_RS03700
8
LIC_RS03705
9
LIC_RS03820
6
LIC_RS03870
5
LIC_RS03900
9
LIC_RS03955
7
LIC_RS03960
5
LIC_RS03980
7
LIC_RS03990
5
LIC_RS04060
7
LIC_RS04065
6
LIC_RS04070
6
LIC_RS04145
7
LIC_RS04340
8
LIC_RS04345
12
LIC_RS04350
8
LIC_RS04360 (acpS)
6
LIC_RS04365
6
LIC_RS04370
7
LIC_RS04375
4
LIC_RS04385 (tsf)
8
LIC_RS04395 (frr)
8
LIC_RS04400
10
LIC_RS04405
12
LIC_RS04410
7
LIC_RS04415
8
LIC_RS04420
7
LIC_RS04425
8
LIC_RS04430
7
LIC_RS04440
12
LIC_RS04445
13
LIC_RS04450
10
LIC_RS04520
11
LIC_RS04525
7
LIC_RS04530
7
LIC_RS04540
7
LIC_RS04600
8
LIC_RS04605
5
LIC_RS04720
8
x_1
6
LIC_RS05180
5
LIC_RS05185
8
LIC_RS05190
8
LIC_RS05225
9
LIC_RS05230
8
LIC_RS05300
5
LIC_RS05355
7
LIC_RS05360
12
LIC_RS05500
7
LIC_RS05505
8
LIC_RS05530
7
LIC_RS05535
6
LIC_RS05555
7
LIC_RS05725
8
LIC_RS05750
7
LIC_RS05845
7
LIC_RS05850
7
LIC_RS05855
6
LIC_RS05875
11
LIC_RS05880
7
LIC_RS05885
8
LIC_RS06005
13
LIC_RS06015
8
LIC_RS06110
7
LIC_RS06115
9
LIC_RS06140
12
LIC_RS06340
8
LIC_RS06370
6
LIC_RS06375
7
LIC_RS06385
12
LIC_RS06390
7
LIC_RS06395
7
LIC_RS06470
7
LIC_RS06475
8
LIC_RS06480
8
LIC_RS06485
7
LIC_RS06490
7
LIC_RS06510
6
LIC_RS06535
6
LIC_RS06550
7
LIC_RS06555
8
LIC_RS06700
7
LIC_RS06705
8
LIC_RS06740
6
LIC_RS06745
8
LIC_RS06815
6
LIC_RS06825
8
LIC_RS06850 (groEL)
7
LIC_RS06855
6
LIC_RS06950
7
LIC_RS07020
8
LIC_RS07025
9
LIC_RS07035
6
LIC_RS07040
6
LIC_RS07045
7
LIC_RS07055
7
LIC_RS07060
7
LIC_RS07075
6
LIC_RS07080
11
LIC_RS07095
5
LIC_RS07115
5
LIC_RS07125 (fliI)
103
LIC_RS07180
6
LIC_RS07190
7
LIC_RS07195
12
LIC_RS07200
7
LIC_RS07210
13
LIC_RS07215
13
LIC_RS07220
7
LIC_RS07240
7
LIC_RS07260
7
LIC_RS07265
8
LIC_RS07445
7
LIC_RS07450
8
LIC_RS07455
6
LIC_RS07470
12
LIC_RS07475
10
LIC_RS07480
7
LIC_RS07485 (gatA)
7
LIC_RS07490
6
LIC_RS07580
6
LIC_RS07640
6
LIC_RS07680
6
LIC_RS07685
8
LIC_RS07745
7
LIC_RS07760
6
LIC_RS07775
7
LIC_RS07780
7
LIC_RS07795
6
LIC_RS07805
6
LIC_RS07825
5
LIC_RS07855
10
LIC_RS07865
7
LIC_RS07890
5
LIC_RS07895 (pyrG)
8
LIC_RS07900
6
LIC_RS07915
8
LIC_RS07920
7
LIC_RS07925
7
LIC_RS07930
6
LIC_RS07935
13
LIC_RS07940
7
LIC_RS07965
9
LIC_RS07985 (trmD)
7
LIC_RS08040
6
LIC_RS08045
7
LIC_RS08050
7
LIC_RS08055
8
LIC_RS08060
6
LIC_RS08090
7
LIC_RS08145
11
LIC_RS08150
5
LIC_RS08175
8
LIC_RS08180
6
LIC_RS08190
6
LIC_RS08210
6
LIC_RS08220
7
LIC_RS08225
6
LIC_RS08230
7
LIC_RS08265
12
LIC_RS08270
6
LIC_RS08280 (fabG)
6
LIC_RS08300
10
LIC_RS08305
7
LIC_RS08345
13
LIC_RS08405
5
LIC_RS08445
8
LIC_RS08460 (purH)
8
LIC_RS08465
7
LIC_RS08470
8
LIC_RS08500
6
LIC_RS08660
9
LIC_RS08675
5
LIC_RS08685
6
LIC_RS08735
121
LIC_RS08760
12
LIC_RS08930
7
LIC_RS08935
7
LIC_RS08940
8
LIC_RS09020
8
LIC_RS09025
8
LIC_RS09030
6
LIC_RS09065
6
LIC_RS09070
7
LIC_RS09090
11
LIC_RS09105
7
LIC_RS09130
10
LIC_RS09135
7
LIC_RS09145
8
LIC_RS09150
6
LIC_RS09175
7
LIC_RS09200
7
LIC_RS09205
7
LIC_RS09215
4
LIC_RS09230
10
LIC_RS09225
6
LIC_RS09245
7
LIC_RS09250
6
LIC_RS09280
10
LIC_RS09290
8
LIC_RS09305
7
LIC_RS09350
6
LIC_RS09365
10
LIC_RS09380
7
LIC_RS09385
14
LIC_RS09400
6
LIC_RS09405
12
LIC_RS09415
7
LIC_RS09420
8
LIC_RS09450
8
LIC_RS09460
6
LIC_RS09465
7
LIC_RS09470
8
LIC_RS09475
5
LIC_RS09535
7
LIC_RS09545
6
LIC_RS09590
6
LIC_RS09600
12
LIC_RS09605
10
LIC_RS09675
8
LIC_RS09685
7
LIC_RS09785
8
LIC_RS09790
8
LIC_RS09905
7
LIC_RS09920
8
LIC_RS09925
7
LIC_RS09940
7
LIC_RS09945
7
LIC_RS09955
8
LIC_RS10065
6
LIC_RS10090
6
LIC_RS10095
8
LIC_RS10100
6
LIC_RS10215
6
LIC_RS10220 (sdhA)
8
LIC_RS10265
12
LIC_RS10315
7
LIC_RS10345
8
LIC_RS10350
6
LIC_RS10355
8
LIC_RS10360
8
LIC_RS10365
25
LIC_RS10590
5
LIC_RS10595
7
LIC_RS10670
7
LIC_RS10675 (pgk)
8
LIC_RS10705
12
LIC_RS10710
8
LIC_RS10755
7
LIC_RS10765
6
LIC_RS10770
7
LIC_RS10785
6
LIC_RS11310
8
LIC_RS11320
13
LIC_RS11445
6
LIC_RS11460
7
LIC_RS11470
6
LIC_RS11495
9
LIC_RS11500
7
LIC_RS11590
9
LIC_RS11595
7
LIC_RS11625
7
x_2
7
LIC_RS11760
8
LIC_RS11765
12
LIC_RS11770
7
LIC_RS11780
8
LIC_RS11785
8
LIC_RS11805
5
LIC_RS11815
9
LIC_RS11825
7
LIC_RS12210
7
LIC_RS12250
7
LIC_RS12300
8
LIC_RS12325
6
LIC_RS12330
8
LIC_RS12375
7
LIC_RS12485
6
LIC_RS12500
7
LIC_RS12530
7
LIC_RS12540
5
LIC_RS12545
6
LIC_RS12550
7
LIC_RS12555
8
LIC_RS12560
7
LIC_RS12660
8
LIC_RS12665
9
LIC_RS12675
8
LIC_RS12680
7
LIC_RS12770
8
LIC_RS12935
6
LIC_RS12945
8
LIC_RS12980
6
LIC_RS12990
8
LIC_RS12995
7
LIC_RS13010
8
LIC_RS13015
7
LIC_RS13020
7
LIC_RS13025
12
LIC_RS13135
110
LIC_RS13145
5
LIC_RS13170
6
LIC_RS13185
8
LIC_RS13190
8
LIC_RS13195
8
LIC_RS13210
6
LIC_RS13265
11
LIC_RS13405
7
LIC_RS13420
6
LIC_RS13425
6
LIC_RS13470
7
LIC_RS13500
8
LIC_RS13510
7
LIC_RS13515
8
LIC_RS13755
12
LIC_RS13760
8
LIC_RS13855
8
LIC_RS13880
7
LIC_RS13970
5
LIC_RS13975
8
LIC_RS13980
7
LIC_RS14070
6
LIC_RS14075
8
LIC_RS14080
8
LIC_RS14085
8
LIC_RS14090
8
LIC_RS14095
8
LIC_RS14110
8
LIC_RS14115
8
LIC_RS14120
8
LIC_RS14230
7
LIC_RS14300
7
LIC_RS14305
6
LIC_RS14425
8
LIC_RS14430
8
LIC_RS14485
7
LIC_RS14490
8
LIC_RS14520 (gltA)
6
LIC_RS14530
6
LIC_RS14570
8
LIC_RS14615
8
LIC_RS14735 (rplB)
8
LIC_RS14760 (tuf)
9
LIC_RS15120
7
LIC_RS15130
5
LIC_RS15195
8
LIC_RS15200
9
LIC_RS15215
6
LIC_RS15220
8
LIC_RS15250
6
LIC_RS15275
7
LIC_RS15280
8
LIC_RS15510
8
LIC_RS15535
8
LIC_RS15540
7
LIC_RS15925
6
LIC_RS15980
7
LIC_RS16170
8
LIC_RS16175
10
LIC_RS16195
8
LIC_RS16225
8
LIC_RS16230
7
LIC_RS16285
7
LIC_RS16320
6
LIC_RS16350
5
LIC_RS16505
11
LIC_RS16515
8
LIC_RS16565
10
LIC_RS16570
8
LIC_RS16780
13
LIC_RS16785
8
LIC_RS16800
7
LIC_RS16825
6
LIC_RS16830
7
LIC_RS16895
7
LIC_RS16975
8
LIC_RS16980
8
LIC_RS17045
7
LIC_RS17065
5
LIC_RS17070
7
LIC_RS17110 (coaD)
7
LIC_RS17115
7
LIC_RS17180
13
LIC_RS17185
11
LIC_RS17210
6
LIC_RS17225
11
LIC_RS17230
7
LIC_RS17340
8
LIC_RS17345
8
LIC_RS17350
7
LIC_RS17405
8
LIC_RS17410
7
LIC_RS17415
8
LIC_RS17420
10
LIC_RS17445
4
LIC_RS17510
8
LIC_RS17735
6
LIC_RS17740
6
LIC_RS17745
8
LIC_RS17750
8
LIC_RS17790
7
LIC_RS17860
12
LIC_RS17865
7
LIC_RS17870
10
LIC_RS17875
15
LIC_RS17880
14
LIC_RS17890
8
LIC_RS17895
8
LIC_RS17900
11
LIC_RS17905
7
LIC_RS17930
9
LIC_RS17935
8
LIC_RS17965
12
LIC_RS17970
6
LIC_RS18020
7
LIC_RS18025
8
LIC_RS18040
8
LIC_RS18045
7
LIC_RS18075
8
LIC_RS18080
8
LIC_RS18115
8
LIC_RS18170
85
LIC_RS18185
8
LIC_RS18205
10
LIC_RS18310
7
LIC_RS18315
5
LIC_RS18330
10
LIC_RS18335
10
LIC_RS18410
9
LIC_RS18435
8
LIC_RS18440
8
LIC_RS18445
7
LIC_RS18490
6
LIC_RS18495
6
LIC_RS18505
12
LIC_RS18565
6
LIC_RS18695
6
LIC_RS18700
13
LIC_RS18705
7
LIC_RS18710
8
LIC_RS18835
8
LIC_RS19060
8
LIC_RS19065
7
LIC_RS19220
7
LIC_RS19290
12
LIC_RS19305
9
LIC_RS19340
5
LIC_RS19375
8
LIC_RS19385
7
LIC_RS19420
6
LIC_RS19435
12
sender
Auto Definer
curator
Auto Definer
date entered
2017-05-28
datestamp
2017-05-28

Similar profiles (determined by classification schemes)

Experimental schemes are subject to change and are not a stable part of the nomenclature.

Classification schemeClustering methodMismatch thresholdStatusGroup Profiles
Cluster_40_cgMLSTSingle-linkage40experimental7837
Test-10Single-linkage10experimental9518
Test-110Single-linkage110experimental6834
Test-150Single-linkage150experimental6734
Test-20Single-linkage20experimental8833
Test-200Single-linkage200experimental6434
Test-220Single-linkage220experimental6319
Test-250Single-linkage250experimental821
Test-30Single-linkage30experimental8437
Test-300Single-linkage300experimental856
Test-50Single-linkage50experimental7437
Test-60Single-linkage60experimental7437
Test-75Single-linkage75experimental7019
Test-80Single-linkage80experimental6937

Tools

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