Profile information for cgST-25 (cgMLST)

cgST
25
LIC_RS00025
84
LIC_RS00030
85
LIC_RS00035
78
LIC_RS00095
77
LIC_RS00150
69
LIC_RS00160
79
LIC_RS00205
1
LIC_RS00245
81
LIC_RS00260
68
LIC_RS00335
1
LIC_RS00340
73
LIC_RS00355
1
LIC_RS00380
62
LIC_RS00385
4
LIC_RS00525
6
LIC_RS00575
69
LIC_RS00580 (hisH)
N
LIC_RS00585
1
LIC_RS00625
67
LIC_RS00655
79
LIC_RS00725
79
LIC_RS00810
63
LIC_RS00815
84
LIC_RS01005
75
LIC_RS01070
1
LIC_RS01090
75
LIC_RS01095
83
LIC_RS01150
84
LIC_RS01160
4
LIC_RS01205
73
LIC_RS01210
66
LIC_RS01375
41
LIC_RS01380
72
LIC_RS01395 (fusA)
84
LIC_RS01435
73
LIC_RS01495
1
LIC_RS01500
79
LIC_RS01545 (fliE)
54
LIC_RS01550 (flgC)
39
LIC_RS01555 (flgB)
1
LIC_RS01605
85
LIC_RS01610
55
LIC_RS01635
76
LIC_RS01645
1
LIC_RS01660
1
LIC_RS01680
71
LIC_RS01690
79
LIC_RS01745
81
LIC_RS01760
85
LIC_RS01850
79
LIC_RS01855
81
LIC_RS01860
4
LIC_RS01865
6
LIC_RS01870
64
LIC_RS02025
1
LIC_RS02030
86
LIC_RS02035
56
LIC_RS02110
4
LIC_RS02115
1
LIC_RS02120
89
LIC_RS02240
78
LIC_RS02250
61
LIC_RS02255
87
LIC_RS02310
77
LIC_RS02315
75
LIC_RS02325
87
LIC_RS02350
1
LIC_RS02365
65
LIC_RS02455
78
LIC_RS02460
82
LIC_RS02515
83
LIC_RS02520
57
LIC_RS02715
66
LIC_RS02720
67
LIC_RS02725
69
LIC_RS02730 (dnaK)
84
LIC_RS02740
63
LIC_RS02770
79
LIC_RS02780
81
LIC_RS03010
N
LIC_RS03035
80
LIC_RS03110
1
LIC_RS03210
4
LIC_RS03215
4
LIC_RS03220
1
LIC_RS03225
61
LIC_RS03230
80
LIC_RS03235
4
LIC_RS03270
42
LIC_RS03275
80
LIC_RS03500
72
LIC_RS03505
1
LIC_RS03510
1
LIC_RS03515
1
LIC_RS03700
83
LIC_RS03705
84
LIC_RS03820
68
LIC_RS03870
1
LIC_RS03900
90
LIC_RS03955
81
LIC_RS03960
62
LIC_RS03980
78
LIC_RS03990
3
LIC_RS04060
51
LIC_RS04065
70
LIC_RS04070
80
LIC_RS04145
73
LIC_RS04340
78
LIC_RS04345
1
LIC_RS04350
79
LIC_RS04360 (acpS)
1
LIC_RS04365
49
LIC_RS04370
58
LIC_RS04375
1
LIC_RS04385 (tsf)
70
LIC_RS04395 (frr)
69
LIC_RS04400
69
LIC_RS04405
64
LIC_RS04410
80
LIC_RS04415
79
LIC_RS04420
89
LIC_RS04425
77
LIC_RS04430
71
LIC_RS04440
79
LIC_RS04445
83
LIC_RS04450
1
LIC_RS04520
81
LIC_RS04525
86
LIC_RS04530
70
LIC_RS04540
79
LIC_RS04600
59
LIC_RS04605
1
LIC_RS04720
67
x_1
80
LIC_RS05180
1
LIC_RS05185
76
LIC_RS05190
1
LIC_RS05225
74
LIC_RS05230
77
LIC_RS05300
1
LIC_RS05355
80
LIC_RS05360
84
LIC_RS05500
63
LIC_RS05505
68
LIC_RS05530
58
LIC_RS05535
1
LIC_RS05555
84
LIC_RS05725
70
LIC_RS05750
6
LIC_RS05845
70
LIC_RS05850
1
LIC_RS05855
71
LIC_RS05875
83
LIC_RS05880
1
LIC_RS05885
79
LIC_RS06005
6
LIC_RS06015
1
LIC_RS06110
80
LIC_RS06115
80
LIC_RS06140
68
LIC_RS06340
64
LIC_RS06370
1
LIC_RS06375
1
LIC_RS06385
1
LIC_RS06390
68
LIC_RS06395
85
LIC_RS06470
78
LIC_RS06475
77
LIC_RS06480
83
LIC_RS06485
1
LIC_RS06490
83
LIC_RS06510
1
LIC_RS06535
71
LIC_RS06550
N
LIC_RS06555
79
LIC_RS06700
4
LIC_RS06705
83
LIC_RS06740
1
LIC_RS06745
7
LIC_RS06815
1
LIC_RS06825
78
LIC_RS06850 (groEL)
77
LIC_RS06855
1
LIC_RS06950
1
LIC_RS07020
65
LIC_RS07025
76
LIC_RS07035
74
LIC_RS07040
1
LIC_RS07045
45
LIC_RS07055
82
LIC_RS07060
79
LIC_RS07075
1
LIC_RS07080
78
LIC_RS07095
1
LIC_RS07115
1
LIC_RS07125 (fliI)
82
LIC_RS07180
69
LIC_RS07190
78
LIC_RS07195
78
LIC_RS07200
4
LIC_RS07210
75
LIC_RS07215
76
LIC_RS07220
4
LIC_RS07240
79
LIC_RS07260
6
LIC_RS07265
76
LIC_RS07445
77
LIC_RS07450
77
LIC_RS07455
78
LIC_RS07470
76
LIC_RS07475
68
LIC_RS07480
4
LIC_RS07485 (gatA)
79
LIC_RS07490
70
LIC_RS07580
76
LIC_RS07640
65
LIC_RS07680
1
LIC_RS07685
1
LIC_RS07745
1
LIC_RS07760
4
LIC_RS07775
84
LIC_RS07780
81
LIC_RS07795
5
LIC_RS07805
1
LIC_RS07825
1
LIC_RS07855
70
LIC_RS07865
57
LIC_RS07890
1
LIC_RS07895 (pyrG)
71
LIC_RS07900
72
LIC_RS07915
72
LIC_RS07920
1
LIC_RS07925
70
LIC_RS07930
1
LIC_RS07935
81
LIC_RS07940
80
LIC_RS07965
61
LIC_RS07985 (trmD)
56
LIC_RS08040
1
LIC_RS08045
76
LIC_RS08050
6
LIC_RS08055
80
LIC_RS08060
1
LIC_RS08090
63
LIC_RS08145
80
LIC_RS08150
75
LIC_RS08175
89
LIC_RS08180
42
LIC_RS08190
1
LIC_RS08210
70
LIC_RS08220
66
LIC_RS08225
47
LIC_RS08230
42
LIC_RS08265
83
LIC_RS08270
71
LIC_RS08280 (fabG)
61
LIC_RS08300
1
LIC_RS08305
6
LIC_RS08345
87
LIC_RS08405
74
LIC_RS08445
72
LIC_RS08460 (purH)
82
LIC_RS08465
64
LIC_RS08470
1
LIC_RS08500
71
LIC_RS08660
75
LIC_RS08675
85
LIC_RS08685
N
LIC_RS08735
60
LIC_RS08760
78
LIC_RS08930
70
LIC_RS08935
72
LIC_RS08940
74
LIC_RS09020
83
LIC_RS09025
79
LIC_RS09030
61
LIC_RS09065
5
LIC_RS09070
64
LIC_RS09090
78
LIC_RS09105
71
LIC_RS09130
77
LIC_RS09135
81
LIC_RS09145
80
LIC_RS09150
73
LIC_RS09175
81
LIC_RS09200
47
LIC_RS09205
76
LIC_RS09215
1
LIC_RS09230
67
LIC_RS09225
N
LIC_RS09245
83
LIC_RS09250
1
LIC_RS09280
78
LIC_RS09290
74
LIC_RS09305
1
LIC_RS09350
3
LIC_RS09365
1
LIC_RS09380
74
LIC_RS09385
82
LIC_RS09400
1
LIC_RS09405
82
LIC_RS09415
1
LIC_RS09420
1
LIC_RS09450
4
LIC_RS09460
58
LIC_RS09465
N
LIC_RS09470
71
LIC_RS09475
1
LIC_RS09535
72
LIC_RS09545
63
LIC_RS09590
4
LIC_RS09600
76
LIC_RS09605
77
LIC_RS09675
81
LIC_RS09685
76
LIC_RS09785
1
LIC_RS09790
81
LIC_RS09905
74
LIC_RS09920
78
LIC_RS09925
69
LIC_RS09940
4
LIC_RS09945
80
LIC_RS09955
7
LIC_RS10065
1
LIC_RS10090
66
LIC_RS10095
82
LIC_RS10100
1
LIC_RS10215
62
LIC_RS10220 (sdhA)
82
LIC_RS10265
63
LIC_RS10315
77
LIC_RS10345
78
LIC_RS10350
75
LIC_RS10355
66
LIC_RS10360
7
LIC_RS10365
1
LIC_RS10590
1
LIC_RS10595
63
LIC_RS10670
75
LIC_RS10675 (pgk)
76
LIC_RS10705
73
LIC_RS10710
72
LIC_RS10755
74
LIC_RS10765
80
LIC_RS10770
82
LIC_RS10785
57
LIC_RS11310
80
LIC_RS11320
83
LIC_RS11445
1
LIC_RS11460
75
LIC_RS11470
1
LIC_RS11495
88
LIC_RS11500
71
LIC_RS11590
83
LIC_RS11595
78
LIC_RS11625
70
x_2
74
LIC_RS11760
73
LIC_RS11765
77
LIC_RS11770
70
LIC_RS11780
1
LIC_RS11785
78
LIC_RS11805
84
LIC_RS11815
72
LIC_RS11825
57
LIC_RS12210
63
LIC_RS12250
1
LIC_RS12300
73
LIC_RS12325
78
LIC_RS12330
82
LIC_RS12375
76
LIC_RS12485
60
LIC_RS12500
72
LIC_RS12530
75
LIC_RS12540
55
LIC_RS12545
1
LIC_RS12550
70
LIC_RS12555
76
LIC_RS12560
52
LIC_RS12660
83
LIC_RS12665
84
LIC_RS12675
75
LIC_RS12680
78
LIC_RS12770
75
LIC_RS12935
57
LIC_RS12945
76
LIC_RS12980
4
LIC_RS12990
79
LIC_RS12995
78
LIC_RS13010
1
LIC_RS13015
73
LIC_RS13020
83
LIC_RS13025
81
LIC_RS13135
76
LIC_RS13145
76
LIC_RS13170
70
LIC_RS13185
75
LIC_RS13190
1
LIC_RS13195
82
LIC_RS13210
3
LIC_RS13265
60
LIC_RS13405
77
LIC_RS13420
55
LIC_RS13425
81
LIC_RS13470
1
LIC_RS13500
81
LIC_RS13510
N
LIC_RS13515
59
LIC_RS13755
4
LIC_RS13760
4
LIC_RS13855
83
LIC_RS13880
71
LIC_RS13970
67
LIC_RS13975
1
LIC_RS13980
1
LIC_RS14070
1
LIC_RS14075
97
LIC_RS14080
N
LIC_RS14085
69
LIC_RS14090
85
LIC_RS14095
77
LIC_RS14110
82
LIC_RS14115
80
LIC_RS14120
75
LIC_RS14230
79
LIC_RS14300
70
LIC_RS14305
38
LIC_RS14425
70
LIC_RS14430
78
LIC_RS14485
1
LIC_RS14490
7
LIC_RS14520 (gltA)
81
LIC_RS14530
59
LIC_RS14570
72
LIC_RS14615
78
LIC_RS14735 (rplB)
75
LIC_RS14760 (tuf)
83
LIC_RS15120
85
LIC_RS15130
1
LIC_RS15195
72
LIC_RS15200
61
LIC_RS15215
1
LIC_RS15220
76
LIC_RS15250
73
LIC_RS15275
79
LIC_RS15280
74
LIC_RS15510
75
LIC_RS15535
66
LIC_RS15540
62
LIC_RS15925
1
LIC_RS15980
81
LIC_RS16170
71
LIC_RS16175
77
LIC_RS16195
65
LIC_RS16225
1
LIC_RS16230
1
LIC_RS16285
73
LIC_RS16320
77
LIC_RS16350
1
LIC_RS16505
69
LIC_RS16515
79
LIC_RS16565
75
LIC_RS16570
78
LIC_RS16780
70
LIC_RS16785
70
LIC_RS16800
51
LIC_RS16825
67
LIC_RS16830
80
LIC_RS16895
74
LIC_RS16975
82
LIC_RS16980
79
LIC_RS17045
73
LIC_RS17065
1
LIC_RS17070
4
LIC_RS17110 (coaD)
1
LIC_RS17115
57
LIC_RS17180
79
LIC_RS17185
1
LIC_RS17210
70
LIC_RS17225
74
LIC_RS17230
78
LIC_RS17340
83
LIC_RS17345
81
LIC_RS17350
4
LIC_RS17405
1
LIC_RS17410
1
LIC_RS17415
82
LIC_RS17420
74
LIC_RS17445
1
LIC_RS17510
4
LIC_RS17735
35
LIC_RS17740
39
LIC_RS17745
76
LIC_RS17750
85
LIC_RS17790
68
LIC_RS17860
80
LIC_RS17865
1
LIC_RS17870
68
LIC_RS17875
90
LIC_RS17880
78
LIC_RS17890
78
LIC_RS17895
82
LIC_RS17900
45
LIC_RS17905
1
LIC_RS17930
75
LIC_RS17935
69
LIC_RS17965
82
LIC_RS17970
75
LIC_RS18020
76
LIC_RS18025
81
LIC_RS18040
75
LIC_RS18045
80
LIC_RS18075
68
LIC_RS18080
67
LIC_RS18115
77
LIC_RS18170
N
LIC_RS18185
77
LIC_RS18205
74
LIC_RS18310
69
LIC_RS18315
1
LIC_RS18330
80
LIC_RS18335
1
LIC_RS18410
82
LIC_RS18435
N
LIC_RS18440
73
LIC_RS18445
72
LIC_RS18490
1
LIC_RS18495
76
LIC_RS18505
73
LIC_RS18565
45
LIC_RS18695
79
LIC_RS18700
48
LIC_RS18705
84
LIC_RS18710
78
LIC_RS18835
79
LIC_RS19060
83
LIC_RS19065
67
LIC_RS19220
74
LIC_RS19290
75
LIC_RS19305
6
LIC_RS19340
1
LIC_RS19375
77
LIC_RS19385
N
LIC_RS19420
N
LIC_RS19435
67
sender
Auto Definer
curator
Auto Definer
date entered
2017-05-28
datestamp
2017-05-28

Similar profiles (determined by classification schemes)

Experimental schemes are subject to change and are not a stable part of the nomenclature.

Classification schemeClustering methodMismatch thresholdStatusGroup Profiles
Cluster_40_cgMLSTSingle-linkage40experimental1920
Test-110Single-linkage110experimental185
Test-150Single-linkage150experimental175
Test-200Single-linkage200experimental175
Test-220Single-linkage220experimental175
Test-250Single-linkage250experimental175
Test-30Single-linkage30experimental11620
Test-300Single-linkage300experimental175
Test-50Single-linkage50experimental1920
Test-60Single-linkage60experimental1920
Test-75Single-linkage75experimental195
Test-80Single-linkage80experimental1820

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