Profile information for cgST-19 (cgMLST)

cgST
19
LIC_RS00025
71
LIC_RS00030
71
LIC_RS00035
68
LIC_RS00095
68
LIC_RS00150
N
LIC_RS00160
70
LIC_RS00205
66
LIC_RS00245
70
LIC_RS00260
8
LIC_RS00335
7
LIC_RS00340
67
LIC_RS00355
6
LIC_RS00380
66
LIC_RS00385
63
LIC_RS00525
69
LIC_RS00575
57
LIC_RS00580 (hisH)
7
LIC_RS00585
7
LIC_RS00625
57
LIC_RS00655
64
LIC_RS00725
68
LIC_RS00810
58
LIC_RS00815
72
LIC_RS01005
12
LIC_RS01070
63
LIC_RS01090
67
LIC_RS01095
8
LIC_RS01150
70
LIC_RS01160
8
LIC_RS01205
N
LIC_RS01210
N
LIC_RS01375
58
LIC_RS01380
66
LIC_RS01395 (fusA)
7
LIC_RS01435
62
LIC_RS01495
5
LIC_RS01500
66
LIC_RS01545 (fliE)
7
LIC_RS01550 (flgC)
6
LIC_RS01555 (flgB)
6
LIC_RS01605
72
LIC_RS01610
58
LIC_RS01635
67
LIC_RS01645
6
LIC_RS01660
5
LIC_RS01680
63
LIC_RS01690
68
LIC_RS01745
70
LIC_RS01760
N
LIC_RS01850
10
LIC_RS01855
72
LIC_RS01860
57
LIC_RS01865
8
LIC_RS01870
58
LIC_RS02025
7
LIC_RS02030
70
LIC_RS02035
7
LIC_RS02110
7
LIC_RS02115
7
LIC_RS02120
75
LIC_RS02240
71
LIC_RS02250
6
LIC_RS02255
N
LIC_RS02310
62
LIC_RS02315
64
LIC_RS02325
73
LIC_RS02350
60
LIC_RS02365
60
LIC_RS02455
12
LIC_RS02460
70
LIC_RS02515
8
LIC_RS02520
6
LIC_RS02715
56
LIC_RS02720
60
LIC_RS02725
64
LIC_RS02730 (dnaK)
68
LIC_RS02740
8
LIC_RS02770
70
LIC_RS02780
70
LIC_RS03010
68
LIC_RS03035
67
LIC_RS03110
6
LIC_RS03210
7
LIC_RS03215
8
LIC_RS03220
8
LIC_RS03225
8
LIC_RS03230
69
LIC_RS03235
48
LIC_RS03270
6
LIC_RS03275
7
LIC_RS03500
66
LIC_RS03505
65
LIC_RS03510
7
LIC_RS03515
7
LIC_RS03700
69
LIC_RS03705
68
LIC_RS03820
6
LIC_RS03870
49
LIC_RS03900
85
LIC_RS03955
67
LIC_RS03960
51
LIC_RS03980
65
LIC_RS03990
62
LIC_RS04060
53
LIC_RS04065
59
LIC_RS04070
65
LIC_RS04145
N
LIC_RS04340
68
LIC_RS04345
68
LIC_RS04350
66
LIC_RS04360 (acpS)
6
LIC_RS04365
7
LIC_RS04370
7
LIC_RS04375
4
LIC_RS04385 (tsf)
8
LIC_RS04395 (frr)
57
LIC_RS04400
10
LIC_RS04405
9
LIC_RS04410
7
LIC_RS04415
70
LIC_RS04420
73
LIC_RS04425
68
LIC_RS04430
58
LIC_RS04440
68
LIC_RS04445
69
LIC_RS04450
10
LIC_RS04520
68
LIC_RS04525
66
LIC_RS04530
66
LIC_RS04540
67
LIC_RS04600
4
LIC_RS04605
51
LIC_RS04720
59
x_1
6
LIC_RS05180
5
LIC_RS05185
N
LIC_RS05190
8
LIC_RS05225
70
LIC_RS05230
65
LIC_RS05300
5
LIC_RS05355
69
LIC_RS05360
12
LIC_RS05500
67
LIC_RS05505
63
LIC_RS05530
7
LIC_RS05535
6
LIC_RS05555
71
LIC_RS05725
9
LIC_RS05750
58
LIC_RS05845
62
LIC_RS05850
7
LIC_RS05855
60
LIC_RS05875
68
LIC_RS05880
7
LIC_RS05885
69
LIC_RS06005
62
LIC_RS06015
64
LIC_RS06110
66
LIC_RS06115
68
LIC_RS06140
59
LIC_RS06340
8
LIC_RS06370
7
LIC_RS06375
53
LIC_RS06385
8
LIC_RS06390
7
LIC_RS06395
71
LIC_RS06470
66
LIC_RS06475
8
LIC_RS06480
70
LIC_RS06485
61
LIC_RS06490
70
LIC_RS06510
6
LIC_RS06535
6
LIC_RS06550
65
LIC_RS06555
67
LIC_RS06700
7
LIC_RS06705
70
LIC_RS06740
6
LIC_RS06745
8
LIC_RS06815
61
LIC_RS06825
67
LIC_RS06850 (groEL)
58
LIC_RS06855
42
LIC_RS06950
66
LIC_RS07020
8
LIC_RS07025
62
LIC_RS07035
66
LIC_RS07040
6
LIC_RS07045
7
LIC_RS07055
69
LIC_RS07060
66
LIC_RS07075
6
LIC_RS07080
11
LIC_RS07095
5
LIC_RS07115
5
LIC_RS07125 (fliI)
70
LIC_RS07180
58
LIC_RS07190
67
LIC_RS07195
66
LIC_RS07200
7
LIC_RS07210
71
LIC_RS07215
71
LIC_RS07220
7
LIC_RS07240
7
LIC_RS07260
62
LIC_RS07265
64
LIC_RS07445
66
LIC_RS07450
66
LIC_RS07455
65
LIC_RS07470
64
LIC_RS07475
7
LIC_RS07480
7
LIC_RS07485 (gatA)
67
LIC_RS07490
61
LIC_RS07580
72
LIC_RS07640
6
LIC_RS07680
6
LIC_RS07685
64
LIC_RS07745
56
LIC_RS07760
50
LIC_RS07775
65
LIC_RS07780
66
LIC_RS07795
60
LIC_RS07805
55
LIC_RS07825
5
LIC_RS07855
62
LIC_RS07865
64
LIC_RS07890
60
LIC_RS07895 (pyrG)
8
LIC_RS07900
60
LIC_RS07915
8
LIC_RS07920
63
LIC_RS07925
7
LIC_RS07930
6
LIC_RS07935
68
LIC_RS07940
67
LIC_RS07965
59
LIC_RS07985 (trmD)
60
LIC_RS08040
60
LIC_RS08045
67
LIC_RS08050
66
LIC_RS08055
67
LIC_RS08060
58
LIC_RS08090
60
LIC_RS08145
66
LIC_RS08150
65
LIC_RS08175
74
LIC_RS08180
6
LIC_RS08190
57
LIC_RS08210
61
LIC_RS08220
62
LIC_RS08225
67
LIC_RS08230
62
LIC_RS08265
74
LIC_RS08270
62
LIC_RS08280 (fabG)
6
LIC_RS08300
64
LIC_RS08305
49
LIC_RS08345
69
LIC_RS08405
61
LIC_RS08445
8
LIC_RS08460 (purH)
67
LIC_RS08465
7
LIC_RS08470
8
LIC_RS08500
61
LIC_RS08660
63
LIC_RS08675
69
LIC_RS08685
6
LIC_RS08735
64
LIC_RS08760
67
LIC_RS08930
8
LIC_RS08935
7
LIC_RS08940
65
LIC_RS09020
73
LIC_RS09025
64
LIC_RS09030
54
LIC_RS09065
6
LIC_RS09070
7
LIC_RS09090
8
LIC_RS09105
62
LIC_RS09130
64
LIC_RS09135
68
LIC_RS09145
71
LIC_RS09150
65
LIC_RS09175
70
LIC_RS09200
63
LIC_RS09205
68
LIC_RS09215
4
LIC_RS09230
71
LIC_RS09225
52
LIC_RS09245
70
LIC_RS09250
6
LIC_RS09280
69
LIC_RS09290
8
LIC_RS09305
7
LIC_RS09350
6
LIC_RS09365
10
LIC_RS09380
65
LIC_RS09385
72
LIC_RS09400
65
LIC_RS09405
70
LIC_RS09415
62
LIC_RS09420
8
LIC_RS09450
54
LIC_RS09460
62
LIC_RS09465
68
LIC_RS09470
62
LIC_RS09475
60
LIC_RS09535
7
LIC_RS09545
59
LIC_RS09590
64
LIC_RS09600
66
LIC_RS09605
65
LIC_RS09675
71
LIC_RS09685
7
LIC_RS09785
68
LIC_RS09790
70
LIC_RS09905
68
LIC_RS09920
66
LIC_RS09925
7
LIC_RS09940
7
LIC_RS09945
61
LIC_RS09955
8
LIC_RS10065
56
LIC_RS10090
6
LIC_RS10095
70
LIC_RS10100
6
LIC_RS10215
6
LIC_RS10220 (sdhA)
71
LIC_RS10265
68
LIC_RS10315
N
LIC_RS10345
66
LIC_RS10350
66
LIC_RS10355
61
LIC_RS10360
68
LIC_RS10365
25
LIC_RS10590
55
LIC_RS10595
57
LIC_RS10670
63
LIC_RS10675 (pgk)
72
LIC_RS10705
66
LIC_RS10710
61
LIC_RS10755
70
LIC_RS10765
67
LIC_RS10770
69
LIC_RS10785
52
LIC_RS11310
68
LIC_RS11320
70
LIC_RS11445
56
LIC_RS11460
65
LIC_RS11470
42
LIC_RS11495
71
LIC_RS11500
66
LIC_RS11590
71
LIC_RS11595
67
LIC_RS11625
57
x_2
63
LIC_RS11760
8
LIC_RS11765
63
LIC_RS11770
64
LIC_RS11780
61
LIC_RS11785
65
LIC_RS11805
N
LIC_RS11815
9
LIC_RS11825
7
LIC_RS12210
7
LIC_RS12250
66
LIC_RS12300
62
LIC_RS12325
62
LIC_RS12330
68
LIC_RS12375
59
LIC_RS12485
6
LIC_RS12500
7
LIC_RS12530
64
LIC_RS12540
54
LIC_RS12545
6
LIC_RS12550
7
LIC_RS12555
68
LIC_RS12560
57
LIC_RS12660
70
LIC_RS12665
9
LIC_RS12675
66
LIC_RS12680
66
LIC_RS12770
8
LIC_RS12935
61
LIC_RS12945
8
LIC_RS12980
60
LIC_RS12990
65
LIC_RS12995
68
LIC_RS13010
70
LIC_RS13015
62
LIC_RS13020
72
LIC_RS13025
69
LIC_RS13135
N
LIC_RS13145
65
LIC_RS13170
64
LIC_RS13185
67
LIC_RS13190
8
LIC_RS13195
71
LIC_RS13210
55
LIC_RS13265
6
LIC_RS13405
68
LIC_RS13420
6
LIC_RS13425
66
LIC_RS13470
61
LIC_RS13500
70
LIC_RS13510
7
LIC_RS13515
8
LIC_RS13755
12
LIC_RS13760
68
LIC_RS13855
70
LIC_RS13880
7
LIC_RS13970
59
LIC_RS13975
54
LIC_RS13980
8
LIC_RS14070
6
LIC_RS14075
72
LIC_RS14080
73
LIC_RS14085
64
LIC_RS14090
71
LIC_RS14095
N
LIC_RS14110
70
LIC_RS14115
70
LIC_RS14120
66
LIC_RS14230
61
LIC_RS14300
65
LIC_RS14305
6
LIC_RS14425
8
LIC_RS14430
68
LIC_RS14485
57
LIC_RS14490
8
LIC_RS14520 (gltA)
70
LIC_RS14530
42
LIC_RS14570
8
LIC_RS14615
68
LIC_RS14735 (rplB)
8
LIC_RS14760 (tuf)
72
LIC_RS15120
73
LIC_RS15130
5
LIC_RS15195
67
LIC_RS15200
9
LIC_RS15215
6
LIC_RS15220
66
LIC_RS15250
61
LIC_RS15275
66
LIC_RS15280
65
LIC_RS15510
9
LIC_RS15535
58
LIC_RS15540
66
LIC_RS15925
63
LIC_RS15980
7
LIC_RS16170
64
LIC_RS16175
N
LIC_RS16195
8
LIC_RS16225
56
LIC_RS16230
66
LIC_RS16285
64
LIC_RS16320
7
LIC_RS16350
5
LIC_RS16505
62
LIC_RS16515
67
LIC_RS16565
66
LIC_RS16570
73
LIC_RS16780
75
LIC_RS16785
8
LIC_RS16800
5
LIC_RS16825
N
LIC_RS16830
69
LIC_RS16895
8
LIC_RS16975
69
LIC_RS16980
70
LIC_RS17045
62
LIC_RS17065
6
LIC_RS17070
66
LIC_RS17110 (coaD)
7
LIC_RS17115
7
LIC_RS17180
69
LIC_RS17185
58
LIC_RS17210
62
LIC_RS17225
68
LIC_RS17230
7
LIC_RS17340
71
LIC_RS17345
69
LIC_RS17350
62
LIC_RS17405
9
LIC_RS17410
7
LIC_RS17415
65
LIC_RS17420
64
LIC_RS17445
4
LIC_RS17510
69
LIC_RS17735
6
LIC_RS17740
6
LIC_RS17745
66
LIC_RS17750
73
LIC_RS17790
61
LIC_RS17860
68
LIC_RS17865
53
LIC_RS17870
10
LIC_RS17875
N
LIC_RS17880
69
LIC_RS17890
67
LIC_RS17895
70
LIC_RS17900
66
LIC_RS17905
7
LIC_RS17930
68
LIC_RS17935
8
LIC_RS17965
71
LIC_RS17970
67
LIC_RS18020
64
LIC_RS18025
8
LIC_RS18040
78
LIC_RS18045
67
LIC_RS18075
63
LIC_RS18080
59
LIC_RS18115
8
LIC_RS18170
61
LIC_RS18185
9
LIC_RS18205
63
LIC_RS18310
59
LIC_RS18315
5
LIC_RS18330
7
LIC_RS18335
63
LIC_RS18410
70
LIC_RS18435
69
LIC_RS18440
61
LIC_RS18445
59
LIC_RS18490
6
LIC_RS18495
64
LIC_RS18505
67
LIC_RS18565
52
LIC_RS18695
N
LIC_RS18700
13
LIC_RS18705
70
LIC_RS18710
68
LIC_RS18835
8
LIC_RS19060
N
LIC_RS19065
7
LIC_RS19220
67
LIC_RS19290
74
LIC_RS19305
9
LIC_RS19340
5
LIC_RS19375
8
LIC_RS19385
58
LIC_RS19420
58
LIC_RS19435
12
sender
Auto Definer
curator
Auto Definer
date entered
2017-05-28
datestamp
2017-05-28

Similar profiles (determined by classification schemes)

Experimental schemes are subject to change and are not a stable part of the nomenclature.

Classification schemeClustering methodMismatch thresholdStatusGroup Profiles
Cluster_40_cgMLSTSingle-linkage40experimental1550
Test-10Single-linkage10experimental173
Test-110Single-linkage110experimental148
Test-150Single-linkage150experimental138
Test-20Single-linkage20experimental168
Test-200Single-linkage200experimental138
Test-220Single-linkage220experimental135
Test-250Single-linkage250experimental135
Test-30Single-linkage30experimental1550
Test-300Single-linkage300experimental856
Test-50Single-linkage50experimental1550
Test-60Single-linkage60experimental1550
Test-75Single-linkage75experimental155
Test-80Single-linkage80experimental1450

Tools

Export: