Profile information for cgST-16 (cgMLST)

cgST
16
LIC_RS00025
6
LIC_RS00030
6
LIC_RS00035
6
LIC_RS00095
7
LIC_RS00150
1
LIC_RS00160
N
LIC_RS00205
N
LIC_RS00245
N
LIC_RS00260
N
LIC_RS00335
1
LIC_RS00340
1
LIC_RS00355
1
LIC_RS00380
7
LIC_RS00385
4
LIC_RS00525
6
LIC_RS00575
6
LIC_RS00580 (hisH)
6
LIC_RS00585
6
LIC_RS00625
6
LIC_RS00655
6
LIC_RS00725
7
LIC_RS00810
6
LIC_RS00815
7
LIC_RS01005
N
LIC_RS01070
N
LIC_RS01090
7
LIC_RS01095
6
LIC_RS01150
6
LIC_RS01160
7
LIC_RS01205
7
LIC_RS01210
6
LIC_RS01375
6
LIC_RS01380
7
LIC_RS01395 (fusA)
6
LIC_RS01435
6
LIC_RS01495
1
LIC_RS01500
75
LIC_RS01545 (fliE)
6
LIC_RS01550 (flgC)
4
LIC_RS01555 (flgB)
1
LIC_RS01605
7
LIC_RS01610
1
LIC_RS01635
6
LIC_RS01645
1
LIC_RS01660
1
LIC_RS01680
N
LIC_RS01690
6
LIC_RS01745
7
LIC_RS01760
6
LIC_RS01850
7
LIC_RS01855
6
LIC_RS01860
4
LIC_RS01865
N
LIC_RS01870
7
LIC_RS02025
4
LIC_RS02030
6
LIC_RS02035
1
LIC_RS02110
6
LIC_RS02115
1
LIC_RS02120
7
LIC_RS02240
7
LIC_RS02250
5
LIC_RS02255
N
LIC_RS02310
73
LIC_RS02315
6
LIC_RS02325
82
LIC_RS02350
6
LIC_RS02365
7
LIC_RS02455
7
LIC_RS02460
6
LIC_RS02515
7
LIC_RS02520
N
LIC_RS02715
6
LIC_RS02720
4
LIC_RS02725
6
LIC_RS02730 (dnaK)
7
LIC_RS02740
6
LIC_RS02770
5
LIC_RS02780
7
LIC_RS03010
N
LIC_RS03035
7
LIC_RS03110
1
LIC_RS03210
4
LIC_RS03215
80
LIC_RS03220
7
LIC_RS03225
6
LIC_RS03230
7
LIC_RS03235
6
LIC_RS03270
5
LIC_RS03275
6
LIC_RS03500
5
LIC_RS03505
1
LIC_RS03510
6
LIC_RS03515
6
LIC_RS03700
78
LIC_RS03705
79
LIC_RS03820
5
LIC_RS03870
1
LIC_RS03900
84
LIC_RS03955
6
LIC_RS03960
1
LIC_RS03980
N
LIC_RS03990
N
LIC_RS04060
6
LIC_RS04065
N
LIC_RS04070
5
LIC_RS04145
6
LIC_RS04340
7
LIC_RS04345
7
LIC_RS04350
6
LIC_RS04360 (acpS)
1
LIC_RS04365
5
LIC_RS04370
6
LIC_RS04375
1
LIC_RS04385 (tsf)
7
LIC_RS04395 (frr)
7
LIC_RS04400
N
LIC_RS04405
7
LIC_RS04410
74
LIC_RS04415
N
LIC_RS04420
83
LIC_RS04425
N
LIC_RS04430
N
LIC_RS04440
N
LIC_RS04445
7
LIC_RS04450
52
LIC_RS04520
N
LIC_RS04525
6
LIC_RS04530
N
LIC_RS04540
N
LIC_RS04600
N
LIC_RS04605
1
LIC_RS04720
N
x_1
73
LIC_RS05180
1
LIC_RS05185
7
LIC_RS05190
1
LIC_RS05225
7
LIC_RS05230
74
LIC_RS05300
1
LIC_RS05355
6
LIC_RS05360
7
LIC_RS05500
6
LIC_RS05505
N
LIC_RS05530
6
LIC_RS05535
1
LIC_RS05555
78
LIC_RS05725
7
LIC_RS05750
6
LIC_RS05845
6
LIC_RS05850
1
LIC_RS05855
67
LIC_RS05875
78
LIC_RS05880
N
LIC_RS05885
7
LIC_RS06005
6
LIC_RS06015
7
LIC_RS06110
75
LIC_RS06115
7
LIC_RS06140
68
LIC_RS06340
7
LIC_RS06370
1
LIC_RS06375
1
LIC_RS06385
80
LIC_RS06390
6
LIC_RS06395
6
LIC_RS06470
6
LIC_RS06475
7
LIC_RS06480
77
LIC_RS06485
6
LIC_RS06490
6
LIC_RS06510
5
LIC_RS06535
72
LIC_RS06550
6
LIC_RS06555
7
LIC_RS06700
4
LIC_RS06705
7
LIC_RS06740
1
LIC_RS06745
6
LIC_RS06815
1
LIC_RS06825
7
LIC_RS06850 (groEL)
6
LIC_RS06855
1
LIC_RS06950
1
LIC_RS07020
7
LIC_RS07025
7
LIC_RS07035
5
LIC_RS07040
1
LIC_RS07045
6
LIC_RS07055
6
LIC_RS07060
N
LIC_RS07075
5
LIC_RS07080
N
LIC_RS07095
1
LIC_RS07115
N
LIC_RS07125 (fliI)
6
LIC_RS07180
5
LIC_RS07190
6
LIC_RS07195
N
LIC_RS07200
1
LIC_RS07210
5
LIC_RS07215
7
LIC_RS07220
56
LIC_RS07240
6
LIC_RS07260
6
LIC_RS07265
7
LIC_RS07445
6
LIC_RS07450
7
LIC_RS07455
N
LIC_RS07470
7
LIC_RS07475
5
LIC_RS07480
4
LIC_RS07485 (gatA)
6
LIC_RS07490
67
LIC_RS07580
71
LIC_RS07640
5
LIC_RS07680
42
LIC_RS07685
7
LIC_RS07745
1
LIC_RS07760
1
LIC_RS07775
6
LIC_RS07780
N
LIC_RS07795
N
LIC_RS07805
1
LIC_RS07825
1
LIC_RS07855
6
LIC_RS07865
6
LIC_RS07890
1
LIC_RS07895 (pyrG)
7
LIC_RS07900
1
LIC_RS07915
7
LIC_RS07920
6
LIC_RS07925
6
LIC_RS07930
5
LIC_RS07935
6
LIC_RS07940
6
LIC_RS07965
7
LIC_RS07985 (trmD)
6
LIC_RS08040
5
LIC_RS08045
6
LIC_RS08050
N
LIC_RS08055
7
LIC_RS08060
N
LIC_RS08090
6
LIC_RS08145
N
LIC_RS08150
N
LIC_RS08175
83
LIC_RS08180
5
LIC_RS08190
1
LIC_RS08210
5
LIC_RS08220
6
LIC_RS08225
5
LIC_RS08230
6
LIC_RS08265
N
LIC_RS08270
N
LIC_RS08280 (fabG)
N
LIC_RS08300
1
LIC_RS08305
6
LIC_RS08345
7
LIC_RS08405
71
LIC_RS08445
7
LIC_RS08460 (purH)
7
LIC_RS08465
N
LIC_RS08470
1
LIC_RS08500
5
LIC_RS08660
5
LIC_RS08675
79
LIC_RS08685
1
LIC_RS08735
6
LIC_RS08760
N
LIC_RS08930
6
LIC_RS08935
6
LIC_RS08940
7
LIC_RS09020
7
LIC_RS09025
7
LIC_RS09030
1
LIC_RS09065
5
LIC_RS09070
6
LIC_RS09090
7
LIC_RS09105
6
LIC_RS09130
6
LIC_RS09135
75
LIC_RS09145
N
LIC_RS09150
N
LIC_RS09175
N
LIC_RS09200
6
LIC_RS09205
6
LIC_RS09215
1
LIC_RS09230
7
LIC_RS09225
N
LIC_RS09245
N
LIC_RS09250
5
LIC_RS09280
6
LIC_RS09290
7
LIC_RS09305
59
LIC_RS09350
3
LIC_RS09365
6
LIC_RS09380
N
LIC_RS09385
N
LIC_RS09400
5
LIC_RS09405
7
LIC_RS09415
N
LIC_RS09420
7
LIC_RS09450
N
LIC_RS09460
N
LIC_RS09465
6
LIC_RS09470
7
LIC_RS09475
N
LIC_RS09535
N
LIC_RS09545
5
LIC_RS09590
4
LIC_RS09600
N
LIC_RS09605
7
LIC_RS09675
7
LIC_RS09685
5
LIC_RS09785
7
LIC_RS09790
7
LIC_RS09905
77
LIC_RS09920
75
LIC_RS09925
6
LIC_RS09940
1
LIC_RS09945
74
LIC_RS09955
7
LIC_RS10065
1
LIC_RS10090
N
LIC_RS10095
7
LIC_RS10100
5
LIC_RS10215
1
LIC_RS10220 (sdhA)
7
LIC_RS10265
N
LIC_RS10315
6
LIC_RS10345
7
LIC_RS10350
71
LIC_RS10355
6
LIC_RS10360
7
LIC_RS10365
1
LIC_RS10590
1
LIC_RS10595
4
LIC_RS10670
6
LIC_RS10675 (pgk)
7
LIC_RS10705
6
LIC_RS10710
69
LIC_RS10755
78
LIC_RS10765
5
LIC_RS10770
6
LIC_RS10785
54
LIC_RS11310
7
LIC_RS11320
6
LIC_RS11445
5
LIC_RS11460
6
LIC_RS11470
1
LIC_RS11495
7
LIC_RS11500
6
LIC_RS11590
7
LIC_RS11595
1
LIC_RS11625
6
x_2
71
LIC_RS11760
7
LIC_RS11765
6
LIC_RS11770
N
LIC_RS11780
66
LIC_RS11785
7
LIC_RS11805
79
LIC_RS11815
7
LIC_RS11825
6
LIC_RS12210
4
LIC_RS12250
73
LIC_RS12300
7
LIC_RS12325
5
LIC_RS12330
N
LIC_RS12375
72
LIC_RS12485
5
LIC_RS12500
6
LIC_RS12530
6
LIC_RS12540
1
LIC_RS12545
1
LIC_RS12550
1
LIC_RS12555
N
LIC_RS12560
6
LIC_RS12660
7
LIC_RS12665
7
LIC_RS12675
7
LIC_RS12680
76
LIC_RS12770
7
LIC_RS12935
5
LIC_RS12945
7
LIC_RS12980
1
LIC_RS12990
7
LIC_RS12995
6
LIC_RS13010
6
LIC_RS13015
1
LIC_RS13020
6
LIC_RS13025
N
LIC_RS13135
7
LIC_RS13145
72
LIC_RS13170
1
LIC_RS13185
7
LIC_RS13190
7
LIC_RS13195
7
LIC_RS13210
N
LIC_RS13265
69
LIC_RS13405
6
LIC_RS13420
1
LIC_RS13425
77
LIC_RS13470
6
LIC_RS13500
7
LIC_RS13510
4
LIC_RS13515
7
LIC_RS13755
7
LIC_RS13760
7
LIC_RS13855
7
LIC_RS13880
N
LIC_RS13970
67
LIC_RS13975
7
LIC_RS13980
6
LIC_RS14070
1
LIC_RS14075
77
LIC_RS14080
81
LIC_RS14085
7
LIC_RS14090
7
LIC_RS14095
7
LIC_RS14110
N
LIC_RS14115
N
LIC_RS14120
7
LIC_RS14230
75
LIC_RS14300
74
LIC_RS14305
1
LIC_RS14425
7
LIC_RS14430
7
LIC_RS14485
5
LIC_RS14490
7
LIC_RS14520 (gltA)
5
LIC_RS14530
54
LIC_RS14570
7
LIC_RS14615
N
LIC_RS14735 (rplB)
7
LIC_RS14760 (tuf)
7
LIC_RS15120
6
LIC_RS15130
1
LIC_RS15195
6
LIC_RS15200
7
LIC_RS15215
5
LIC_RS15220
7
LIC_RS15250
68
LIC_RS15275
74
LIC_RS15280
7
LIC_RS15510
7
LIC_RS15535
7
LIC_RS15540
6
LIC_RS15925
1
LIC_RS15980
46
LIC_RS16170
7
LIC_RS16175
6
LIC_RS16195
7
LIC_RS16225
7
LIC_RS16230
5
LIC_RS16285
6
LIC_RS16320
5
LIC_RS16350
1
LIC_RS16505
N
LIC_RS16515
7
LIC_RS16565
6
LIC_RS16570
7
LIC_RS16780
83
LIC_RS16785
72
LIC_RS16800
1
LIC_RS16825
N
LIC_RS16830
N
LIC_RS16895
70
LIC_RS16975
7
LIC_RS16980
7
LIC_RS17045
6
LIC_RS17065
1
LIC_RS17070
6
LIC_RS17110 (coaD)
6
LIC_RS17115
6
LIC_RS17180
7
LIC_RS17185
63
LIC_RS17210
5
LIC_RS17225
1
LIC_RS17230
N
LIC_RS17340
7
LIC_RS17345
7
LIC_RS17350
4
LIC_RS17405
70
LIC_RS17410
N
LIC_RS17415
7
LIC_RS17420
4
LIC_RS17445
1
LIC_RS17510
79
LIC_RS17735
N
LIC_RS17740
4
LIC_RS17745
7
LIC_RS17750
7
LIC_RS17790
6
LIC_RS17860
5
LIC_RS17865
5
LIC_RS17870
1
LIC_RS17875
6
LIC_RS17880
6
LIC_RS17890
6
LIC_RS17895
6
LIC_RS17900
6
LIC_RS17905
1
LIC_RS17930
7
LIC_RS17935
7
LIC_RS17965
7
LIC_RS17970
5
LIC_RS18020
6
LIC_RS18025
77
LIC_RS18040
77
LIC_RS18045
6
LIC_RS18075
7
LIC_RS18080
N
LIC_RS18115
6
LIC_RS18170
7
LIC_RS18185
N
LIC_RS18205
5
LIC_RS18310
6
LIC_RS18315
1
LIC_RS18330
6
LIC_RS18335
6
LIC_RS18410
N
LIC_RS18435
7
LIC_RS18440
N
LIC_RS18445
6
LIC_RS18490
5
LIC_RS18495
5
LIC_RS18505
6
LIC_RS18565
1
LIC_RS18695
5
LIC_RS18700
6
LIC_RS18705
34
LIC_RS18710
36
LIC_RS18835
6
LIC_RS19060
77
LIC_RS19065
4
LIC_RS19220
6
LIC_RS19290
7
LIC_RS19305
6
LIC_RS19340
1
LIC_RS19375
7
LIC_RS19385
N
LIC_RS19420
5
LIC_RS19435
7
sender
Auto Definer
curator
Auto Definer
date entered
2017-05-28
datestamp
2017-05-28

Similar profiles (determined by classification schemes)

Experimental schemes are subject to change and are not a stable part of the nomenclature.

Classification schemeClustering methodMismatch thresholdStatusGroup Profiles
Test-110Single-linkage110experimental1112
Test-150Single-linkage150experimental1014
Test-200Single-linkage200experimental1014
Test-220Single-linkage220experimental108
Test-250Single-linkage250experimental108
Test-300Single-linkage300experimental1014
Test-50Single-linkage50experimental1233
Test-60Single-linkage60experimental5733
Test-75Single-linkage75experimental128
Test-80Single-linkage80experimental1133

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