Profile information for cgST-14 (cgMLST)

cgST
14
LIC_RS00025
66
LIC_RS00030
67
LIC_RS00035
65
LIC_RS00095
1
LIC_RS00150
4
LIC_RS00160
65
LIC_RS00205
71
LIC_RS00245
65
LIC_RS00260
54
LIC_RS00335
1
LIC_RS00340
62
LIC_RS00355
1
LIC_RS00380
72
LIC_RS00385
67
LIC_RS00525
76
LIC_RS00575
1
LIC_RS00580 (hisH)
N
LIC_RS00585
1
LIC_RS00625
50
LIC_RS00655
65
LIC_RS00725
64
LIC_RS00810
1
LIC_RS00815
67
LIC_RS01005
64
LIC_RS01070
1
LIC_RS01090
63
LIC_RS01095
64
LIC_RS01150
65
LIC_RS01160
66
LIC_RS01205
61
LIC_RS01210
59
LIC_RS01375
41
LIC_RS01380
62
LIC_RS01395 (fusA)
67
LIC_RS01435
63
LIC_RS01495
1
LIC_RS01500
62
LIC_RS01545 (fliE)
50
LIC_RS01550 (flgC)
39
LIC_RS01555 (flgB)
1
LIC_RS01605
67
LIC_RS01610
55
LIC_RS01635
64
LIC_RS01645
50
LIC_RS01660
1
LIC_RS01680
4
LIC_RS01690
64
LIC_RS01745
65
LIC_RS01760
81
LIC_RS01850
62
LIC_RS01855
67
LIC_RS01860
1
LIC_RS01865
65
LIC_RS01870
7
LIC_RS02025
4
LIC_RS02030
81
LIC_RS02035
49
LIC_RS02110
58
LIC_RS02115
31
LIC_RS02120
70
LIC_RS02240
67
LIC_RS02250
1
LIC_RS02255
81
LIC_RS02310
72
LIC_RS02315
61
LIC_RS02325
69
LIC_RS02350
6
LIC_RS02365
1
LIC_RS02455
63
LIC_RS02460
66
LIC_RS02515
68
LIC_RS02520
1
LIC_RS02715
1
LIC_RS02720
1
LIC_RS02725
60
LIC_RS02730 (dnaK)
80
LIC_RS02740
31
LIC_RS02770
66
LIC_RS02780
65
LIC_RS03010
N
LIC_RS03035
76
LIC_RS03110
1
LIC_RS03210
4
LIC_RS03215
67
LIC_RS03220
4
LIC_RS03225
61
LIC_RS03230
66
LIC_RS03235
4
LIC_RS03270
42
LIC_RS03275
75
LIC_RS03500
5
LIC_RS03505
63
LIC_RS03510
1
LIC_RS03515
60
LIC_RS03700
64
LIC_RS03705
78
LIC_RS03820
64
LIC_RS03870
37
LIC_RS03900
69
LIC_RS03955
77
LIC_RS03960
1
LIC_RS03980
73
LIC_RS03990
3
LIC_RS04060
6
LIC_RS04065
67
LIC_RS04070
76
LIC_RS04145
60
LIC_RS04340
63
LIC_RS04345
1
LIC_RS04350
75
LIC_RS04360 (acpS)
49
LIC_RS04365
46
LIC_RS04370
6
LIC_RS04375
1
LIC_RS04385 (tsf)
60
LIC_RS04395 (frr)
7
LIC_RS04400
57
LIC_RS04405
64
LIC_RS04410
62
LIC_RS04415
1
LIC_RS04420
82
LIC_RS04425
63
LIC_RS04430
59
LIC_RS04440
63
LIC_RS04445
64
LIC_RS04450
52
LIC_RS04520
77
LIC_RS04525
80
LIC_RS04530
1
LIC_RS04540
73
LIC_RS04600
55
LIC_RS04605
52
LIC_RS04720
56
x_1
72
LIC_RS05180
1
LIC_RS05185
72
LIC_RS05190
59
LIC_RS05225
65
LIC_RS05230
61
LIC_RS05300
1
LIC_RS05355
76
LIC_RS05360
66
LIC_RS05500
63
LIC_RS05505
68
LIC_RS05530
58
LIC_RS05535
1
LIC_RS05555
67
LIC_RS05725
59
LIC_RS05750
54
LIC_RS05845
59
LIC_RS05850
1
LIC_RS05855
71
LIC_RS05875
64
LIC_RS05880
1
LIC_RS05885
64
LIC_RS06005
1
LIC_RS06015
61
LIC_RS06110
62
LIC_RS06115
64
LIC_RS06140
55
LIC_RS06340
66
LIC_RS06370
39
LIC_RS06375
1
LIC_RS06385
79
LIC_RS06390
68
LIC_RS06395
79
LIC_RS06470
62
LIC_RS06475
62
LIC_RS06480
65
LIC_RS06485
68
LIC_RS06490
65
LIC_RS06510
1
LIC_RS06535
71
LIC_RS06550
61
LIC_RS06555
76
LIC_RS06700
4
LIC_RS06705
65
LIC_RS06740
1
LIC_RS06745
7
LIC_RS06815
1
LIC_RS06825
76
LIC_RS06850 (groEL)
59
LIC_RS06855
1
LIC_RS06950
63
LIC_RS07020
57
LIC_RS07025
63
LIC_RS07035
30
LIC_RS07040
53
LIC_RS07045
6
LIC_RS07055
64
LIC_RS07060
74
LIC_RS07075
1
LIC_RS07080
N
LIC_RS07095
1
LIC_RS07115
1
LIC_RS07125 (fliI)
78
LIC_RS07180
53
LIC_RS07190
6
LIC_RS07195
1
LIC_RS07200
1
LIC_RS07210
47
LIC_RS07215
67
LIC_RS07220
56
LIC_RS07240
76
LIC_RS07260
59
LIC_RS07265
59
LIC_RS07445
73
LIC_RS07450
73
LIC_RS07455
74
LIC_RS07470
71
LIC_RS07475
66
LIC_RS07480
4
LIC_RS07485 (gatA)
62
LIC_RS07490
5
LIC_RS07580
59
LIC_RS07640
65
LIC_RS07680
1
LIC_RS07685
1
LIC_RS07745
1
LIC_RS07760
1
LIC_RS07775
78
LIC_RS07780
75
LIC_RS07795
5
LIC_RS07805
1
LIC_RS07825
1
LIC_RS07855
60
LIC_RS07865
30
LIC_RS07890
64
LIC_RS07895 (pyrG)
71
LIC_RS07900
68
LIC_RS07915
67
LIC_RS07920
67
LIC_RS07925
65
LIC_RS07930
1
LIC_RS07935
77
LIC_RS07940
75
LIC_RS07965
4
LIC_RS07985 (trmD)
61
LIC_RS08040
1
LIC_RS08045
76
LIC_RS08050
73
LIC_RS08055
64
LIC_RS08060
55
LIC_RS08090
57
LIC_RS08145
75
LIC_RS08150
72
LIC_RS08175
69
LIC_RS08180
1
LIC_RS08190
1
LIC_RS08210
68
LIC_RS08220
6
LIC_RS08225
5
LIC_RS08230
42
LIC_RS08265
69
LIC_RS08270
70
LIC_RS08280 (fabG)
61
LIC_RS08300
61
LIC_RS08305
6
LIC_RS08345
1
LIC_RS08405
57
LIC_RS08445
62
LIC_RS08460 (purH)
78
LIC_RS08465
43
LIC_RS08470
1
LIC_RS08500
57
LIC_RS08660
72
LIC_RS08675
65
LIC_RS08685
N
LIC_RS08735
6
LIC_RS08760
61
LIC_RS08930
61
LIC_RS08935
59
LIC_RS08940
61
LIC_RS09020
69
LIC_RS09025
65
LIC_RS09030
1
LIC_RS09065
1
LIC_RS09070
66
LIC_RS09090
74
LIC_RS09105
6
LIC_RS09130
71
LIC_RS09135
75
LIC_RS09145
1
LIC_RS09150
70
LIC_RS09175
67
LIC_RS09200
6
LIC_RS09205
6
LIC_RS09215
1
LIC_RS09230
67
LIC_RS09225
N
LIC_RS09245
77
LIC_RS09250
1
LIC_RS09280
64
LIC_RS09290
31
LIC_RS09305
1
LIC_RS09350
3
LIC_RS09365
71
LIC_RS09380
61
LIC_RS09385
67
LIC_RS09400
64
LIC_RS09405
65
LIC_RS09415
58
LIC_RS09420
1
LIC_RS09450
4
LIC_RS09460
58
LIC_RS09465
64
LIC_RS09470
1
LIC_RS09475
57
LIC_RS09535
69
LIC_RS09545
55
LIC_RS09590
4
LIC_RS09600
61
LIC_RS09605
61
LIC_RS09675
66
LIC_RS09685
64
LIC_RS09785
63
LIC_RS09790
65
LIC_RS09905
76
LIC_RS09920
74
LIC_RS09925
65
LIC_RS09940
1
LIC_RS09945
62
LIC_RS09955
59
LIC_RS10065
1
LIC_RS10090
1
LIC_RS10095
65
LIC_RS10100
26
LIC_RS10215
66
LIC_RS10220 (sdhA)
66
LIC_RS10265
63
LIC_RS10315
62
LIC_RS10345
61
LIC_RS10350
62
LIC_RS10355
68
LIC_RS10360
7
LIC_RS10365
26
LIC_RS10590
1
LIC_RS10595
54
LIC_RS10670
59
LIC_RS10675 (pgk)
67
LIC_RS10705
63
LIC_RS10710
56
LIC_RS10755
77
LIC_RS10765
63
LIC_RS10770
65
LIC_RS10785
1
LIC_RS11310
64
LIC_RS11320
66
LIC_RS11445
61
LIC_RS11460
71
LIC_RS11470
1
LIC_RS11495
82
LIC_RS11500
74
LIC_RS11590
66
LIC_RS11595
64
LIC_RS11625
67
x_2
1
LIC_RS11760
63
LIC_RS11765
73
LIC_RS11770
72
LIC_RS11780
1
LIC_RS11785
72
LIC_RS11805
66
LIC_RS11815
63
LIC_RS11825
51
LIC_RS12210
57
LIC_RS12250
72
LIC_RS12300
58
LIC_RS12325
70
LIC_RS12330
78
LIC_RS12375
60
LIC_RS12485
60
LIC_RS12500
61
LIC_RS12530
4
LIC_RS12540
1
LIC_RS12545
1
LIC_RS12550
67
LIC_RS12555
64
LIC_RS12560
52
LIC_RS12660
66
LIC_RS12665
68
LIC_RS12675
1
LIC_RS12680
63
LIC_RS12770
61
LIC_RS12935
57
LIC_RS12945
62
LIC_RS12980
4
LIC_RS12990
61
LIC_RS12995
64
LIC_RS13010
6
LIC_RS13015
1
LIC_RS13020
78
LIC_RS13025
76
LIC_RS13135
62
LIC_RS13145
62
LIC_RS13170
61
LIC_RS13185
4
LIC_RS13190
66
LIC_RS13195
34
LIC_RS13210
56
LIC_RS13265
60
LIC_RS13405
1
LIC_RS13420
1
LIC_RS13425
61
LIC_RS13470
1
LIC_RS13500
66
LIC_RS13510
64
LIC_RS13515
4
LIC_RS13755
65
LIC_RS13760
63
LIC_RS13855
66
LIC_RS13880
68
LIC_RS13970
56
LIC_RS13975
41
LIC_RS13980
1
LIC_RS14070
55
LIC_RS14075
N
LIC_RS14080
69
LIC_RS14085
62
LIC_RS14090
65
LIC_RS14095
1
LIC_RS14110
78
LIC_RS14115
76
LIC_RS14120
4
LIC_RS14230
62
LIC_RS14300
60
LIC_RS14305
38
LIC_RS14425
63
LIC_RS14430
65
LIC_RS14485
5
LIC_RS14490
60
LIC_RS14520 (gltA)
1
LIC_RS14530
21
LIC_RS14570
59
LIC_RS14615
1
LIC_RS14735 (rplB)
1
LIC_RS14760 (tuf)
80
LIC_RS15120
68
LIC_RS15130
57
LIC_RS15195
77
LIC_RS15200
7
LIC_RS15215
1
LIC_RS15220
62
LIC_RS15250
67
LIC_RS15275
61
LIC_RS15280
60
LIC_RS15510
63
LIC_RS15535
1
LIC_RS15540
62
LIC_RS15925
58
LIC_RS15980
64
LIC_RS16170
60
LIC_RS16175
63
LIC_RS16195
59
LIC_RS16225
61
LIC_RS16230
63
LIC_RS16285
59
LIC_RS16320
1
LIC_RS16350
1
LIC_RS16505
6
LIC_RS16515
63
LIC_RS16565
61
LIC_RS16570
78
LIC_RS16780
70
LIC_RS16785
1
LIC_RS16800
1
LIC_RS16825
63
LIC_RS16830
64
LIC_RS16895
63
LIC_RS16975
64
LIC_RS16980
66
LIC_RS17045
68
LIC_RS17065
1
LIC_RS17070
62
LIC_RS17110 (coaD)
54
LIC_RS17115
53
LIC_RS17180
65
LIC_RS17185
N
LIC_RS17210
1
LIC_RS17225
1
LIC_RS17230
73
LIC_RS17340
66
LIC_RS17345
66
LIC_RS17350
4
LIC_RS17405
1
LIC_RS17410
65
LIC_RS17415
66
LIC_RS17420
60
LIC_RS17445
1
LIC_RS17510
78
LIC_RS17735
30
LIC_RS17740
4
LIC_RS17745
4
LIC_RS17750
68
LIC_RS17790
65
LIC_RS17860
75
LIC_RS17865
5
LIC_RS17870
1
LIC_RS17875
72
LIC_RS17880
67
LIC_RS17890
63
LIC_RS17895
78
LIC_RS17900
73
LIC_RS17905
1
LIC_RS17930
75
LIC_RS17935
69
LIC_RS17965
67
LIC_RS17970
62
LIC_RS18020
70
LIC_RS18025
64
LIC_RS18040
65
LIC_RS18045
74
LIC_RS18075
1
LIC_RS18080
55
LIC_RS18115
73
LIC_RS18170
N
LIC_RS18185
73
LIC_RS18205
71
LIC_RS18310
55
LIC_RS18315
1
LIC_RS18330
77
LIC_RS18335
1
LIC_RS18410
65
LIC_RS18435
64
LIC_RS18440
69
LIC_RS18445
60
LIC_RS18490
1
LIC_RS18495
72
LIC_RS18505
71
LIC_RS18565
45
LIC_RS18695
48
LIC_RS18700
1
LIC_RS18705
67
LIC_RS18710
65
LIC_RS18835
75
LIC_RS19060
65
LIC_RS19065
4
LIC_RS19220
1
LIC_RS19290
63
LIC_RS19305
6
LIC_RS19340
1
LIC_RS19375
62
LIC_RS19385
N
LIC_RS19420
54
LIC_RS19435
1
sender
Auto Definer
curator
Auto Definer
date entered
2017-05-28
datestamp
2017-05-28

Similar profiles (determined by classification schemes)

Experimental schemes are subject to change and are not a stable part of the nomenclature.

Classification schemeClustering methodMismatch thresholdStatusGroup Profiles
Cluster_40_cgMLSTSingle-linkage40experimental108
Test-110Single-linkage110experimental920
Test-150Single-linkage150experimental920
Test-20Single-linkage20experimental113
Test-200Single-linkage200experimental920
Test-220Single-linkage220experimental912
Test-250Single-linkage250experimental912
Test-30Single-linkage30experimental106
Test-300Single-linkage300experimental924
Test-50Single-linkage50experimental108
Test-60Single-linkage60experimental1030
Test-75Single-linkage75experimental1010
Test-80Single-linkage80experimental940

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