Profile information for cgST-115 (cgMLST)

cgST
115
LIC_RS00025
115
LIC_RS00030
76
LIC_RS00035
N
LIC_RS00095
7
LIC_RS00150
29
LIC_RS00160
102
LIC_RS00205
98
LIC_RS00245
103
LIC_RS00260
62
LIC_RS00335
31
LIC_RS00340
29
LIC_RS00355
26
LIC_RS00380
79
LIC_RS00385
85
LIC_RS00525
30
LIC_RS00575
69
LIC_RS00580 (hisH)
N
LIC_RS00585
74
LIC_RS00625
54
LIC_RS00655
94
LIC_RS00725
101
LIC_RS00810
66
LIC_RS00815
88
LIC_RS01005
71
LIC_RS01070
59
LIC_RS01090
98
LIC_RS01095
106
LIC_RS01150
118
LIC_RS01160
63
LIC_RS01205
71
LIC_RS01210
71
LIC_RS01375
27
LIC_RS01380
92
LIC_RS01395 (fusA)
33
LIC_RS01435
32
LIC_RS01495
1
LIC_RS01500
30
LIC_RS01545 (fliE)
63
LIC_RS01550 (flgC)
26
LIC_RS01555 (flgB)
1
LIC_RS01605
117
LIC_RS01610
28
LIC_RS01635
96
LIC_RS01645
1
LIC_RS01660
1
LIC_RS01680
75
LIC_RS01690
97
LIC_RS01745
86
LIC_RS01760
120
LIC_RS01850
76
LIC_RS01855
109
LIC_RS01860
68
LIC_RS01865
102
LIC_RS01870
81
LIC_RS02025
4
LIC_RS02030
112
LIC_RS02035
25
LIC_RS02110
31
LIC_RS02115
31
LIC_RS02120
121
LIC_RS02240
7
LIC_RS02250
5
LIC_RS02255
82
LIC_RS02310
28
LIC_RS02315
93
LIC_RS02325
113
LIC_RS02350
84
LIC_RS02365
88
LIC_RS02455
82
LIC_RS02460
109
LIC_RS02515
92
LIC_RS02520
52
LIC_RS02715
68
LIC_RS02720
1
LIC_RS02725
92
LIC_RS02730 (dnaK)
111
LIC_RS02740
69
LIC_RS02770
104
LIC_RS02780
114
LIC_RS03010
94
LIC_RS03035
105
LIC_RS03110
56
LIC_RS03210
27
LIC_RS03215
101
LIC_RS03220
78
LIC_RS03225
1
LIC_RS03230
95
LIC_RS03235
4
LIC_RS03270
57
LIC_RS03275
101
LIC_RS03500
63
LIC_RS03505
31
LIC_RS03510
6
LIC_RS03515
30
LIC_RS03700
109
LIC_RS03705
111
LIC_RS03820
61
LIC_RS03870
26
LIC_RS03900
128
LIC_RS03955
110
LIC_RS03960
66
LIC_RS03980
102
LIC_RS03990
58
LIC_RS04060
30
LIC_RS04065
1
LIC_RS04070
112
LIC_RS04145
30
LIC_RS04340
29
LIC_RS04345
33
LIC_RS04350
71
LIC_RS04360 (acpS)
1
LIC_RS04365
1
LIC_RS04370
26
LIC_RS04375
1
LIC_RS04385 (tsf)
31
LIC_RS04395 (frr)
7
LIC_RS04400
79
LIC_RS04405
104
LIC_RS04410
108
LIC_RS04415
102
LIC_RS04420
113
LIC_RS04425
105
LIC_RS04430
90
LIC_RS04440
74
LIC_RS04445
100
LIC_RS04450
30
LIC_RS04520
74
LIC_RS04525
33
LIC_RS04530
87
LIC_RS04540
95
LIC_RS04600
56
LIC_RS04605
1
LIC_RS04720
86
x_1
90
LIC_RS05180
1
LIC_RS05185
79
LIC_RS05190
63
LIC_RS05225
66
LIC_RS05230
105
LIC_RS05300
48
LIC_RS05355
31
LIC_RS05360
34
LIC_RS05500
89
LIC_RS05505
75
LIC_RS05530
94
LIC_RS05535
4
LIC_RS05555
33
LIC_RS05725
88
LIC_RS05750
50
LIC_RS05845
30
LIC_RS05850
41
LIC_RS05855
101
LIC_RS05875
86
LIC_RS05880
72
LIC_RS05885
85
LIC_RS06005
30
LIC_RS06015
79
LIC_RS06110
102
LIC_RS06115
32
LIC_RS06140
64
LIC_RS06340
29
LIC_RS06370
40
LIC_RS06375
28
LIC_RS06385
114
LIC_RS06390
90
LIC_RS06395
113
LIC_RS06470
62
LIC_RS06475
31
LIC_RS06480
111
LIC_RS06485
43
LIC_RS06490
85
LIC_RS06510
24
LIC_RS06535
101
LIC_RS06550
N
LIC_RS06555
33
LIC_RS06700
31
LIC_RS06705
110
LIC_RS06740
68
LIC_RS06745
N
LIC_RS06815
59
LIC_RS06825
32
LIC_RS06850 (groEL)
27
LIC_RS06855
41
LIC_RS06950
46
LIC_RS07020
61
LIC_RS07025
104
LIC_RS07035
30
LIC_RS07040
28
LIC_RS07045
64
LIC_RS07055
108
LIC_RS07060
72
LIC_RS07075
69
LIC_RS07080
113
LIC_RS07095
1
LIC_RS07115
57
LIC_RS07125 (fliI)
102
LIC_RS07180
64
LIC_RS07190
73
LIC_RS07195
72
LIC_RS07200
1
LIC_RS07210
64
LIC_RS07215
33
LIC_RS07220
30
LIC_RS07240
104
LIC_RS07260
31
LIC_RS07265
29
LIC_RS07445
73
LIC_RS07450
73
LIC_RS07455
99
LIC_RS07470
106
LIC_RS07475
73
LIC_RS07480
28
LIC_RS07485 (gatA)
103
LIC_RS07490
76
LIC_RS07580
60
LIC_RS07640
65
LIC_RS07680
23
LIC_RS07685
31
LIC_RS07745
1
LIC_RS07760
1
LIC_RS07775
112
LIC_RS07780
91
LIC_RS07795
84
LIC_RS07805
66
LIC_RS07825
65
LIC_RS07855
30
LIC_RS07865
30
LIC_RS07890
82
LIC_RS07895 (pyrG)
74
LIC_RS07900
91
LIC_RS07915
30
LIC_RS07920
32
LIC_RS07925
30
LIC_RS07930
1
LIC_RS07935
73
LIC_RS07940
72
LIC_RS07965
29
LIC_RS07985 (trmD)
29
LIC_RS08040
1
LIC_RS08045
103
LIC_RS08050
104
LIC_RS08055
31
LIC_RS08060
27
LIC_RS08090
29
LIC_RS08145
93
LIC_RS08150
91
LIC_RS08175
96
LIC_RS08180
70
LIC_RS08190
1
LIC_RS08210
67
LIC_RS08220
31
LIC_RS08225
72
LIC_RS08230
72
LIC_RS08265
70
LIC_RS08270
59
LIC_RS08280 (fabG)
33
LIC_RS08300
80
LIC_RS08305
25
LIC_RS08345
113
LIC_RS08405
29
LIC_RS08445
63
LIC_RS08460 (purH)
110
LIC_RS08465
58
LIC_RS08470
29
LIC_RS08500
93
LIC_RS08660
69
LIC_RS08675
109
LIC_RS08685
28
LIC_RS08735
30
LIC_RS08760
94
LIC_RS08930
67
LIC_RS08935
68
LIC_RS08940
62
LIC_RS09020
117
LIC_RS09025
32
LIC_RS09030
68
LIC_RS09065
1
LIC_RS09070
63
LIC_RS09090
95
LIC_RS09105
68
LIC_RS09130
96
LIC_RS09135
108
LIC_RS09145
76
LIC_RS09150
61
LIC_RS09175
101
LIC_RS09200
1
LIC_RS09205
32
LIC_RS09215
1
LIC_RS09230
33
LIC_RS09225
N
LIC_RS09245
32
LIC_RS09250
47
LIC_RS09280
65
LIC_RS09290
97
LIC_RS09305
29
LIC_RS09350
3
LIC_RS09365
89
LIC_RS09380
90
LIC_RS09385
98
LIC_RS09400
89
LIC_RS09405
33
LIC_RS09415
64
LIC_RS09420
85
LIC_RS09450
73
LIC_RS09460
87
LIC_RS09465
N
LIC_RS09470
4
LIC_RS09475
57
LIC_RS09535
91
LIC_RS09545
56
LIC_RS09590
32
LIC_RS09600
31
LIC_RS09605
29
LIC_RS09675
32
LIC_RS09685
5
LIC_RS09785
80
LIC_RS09790
65
LIC_RS09905
105
LIC_RS09920
103
LIC_RS09925
65
LIC_RS09940
69
LIC_RS09945
32
LIC_RS09955
7
LIC_RS10065
1
LIC_RS10090
29
LIC_RS10095
33
LIC_RS10100
26
LIC_RS10215
1
LIC_RS10220 (sdhA)
112
LIC_RS10265
102
LIC_RS10315
105
LIC_RS10345
102
LIC_RS10350
94
LIC_RS10355
6
LIC_RS10360
98
LIC_RS10365
14
LIC_RS10590
61
LIC_RS10595
29
LIC_RS10670
68
LIC_RS10675 (pgk)
N
LIC_RS10705
88
LIC_RS10710
95
LIC_RS10755
31
LIC_RS10765
32
LIC_RS10770
33
LIC_RS10785
57
LIC_RS11310
88
LIC_RS11320
97
LIC_RS11445
1
LIC_RS11460
93
LIC_RS11470
25
LIC_RS11495
92
LIC_RS11500
99
LIC_RS11590
76
LIC_RS11595
32
LIC_RS11625
86
x_2
30
LIC_RS11760
64
LIC_RS11765
75
LIC_RS11770
95
LIC_RS11780
81
LIC_RS11785
30
LIC_RS11805
109
LIC_RS11815
34
LIC_RS11825
73
LIC_RS12210
4
LIC_RS12250
101
LIC_RS12300
100
LIC_RS12325
100
LIC_RS12330
99
LIC_RS12375
61
LIC_RS12485
61
LIC_RS12500
30
LIC_RS12530
60
LIC_RS12540
68
LIC_RS12545
1
LIC_RS12550
72
LIC_RS12555
104
LIC_RS12560
74
LIC_RS12660
32
LIC_RS12665
34
LIC_RS12675
71
LIC_RS12680
96
LIC_RS12770
78
LIC_RS12935
91
LIC_RS12945
71
LIC_RS12980
30
LIC_RS12990
75
LIC_RS12995
73
LIC_RS13010
98
LIC_RS13015
1
LIC_RS13020
105
LIC_RS13025
97
LIC_RS13135
109
LIC_RS13145
99
LIC_RS13170
28
LIC_RS13185
33
LIC_RS13190
35
LIC_RS13195
92
LIC_RS13210
26
LIC_RS13265
61
LIC_RS13405
32
LIC_RS13420
4
LIC_RS13425
62
LIC_RS13470
72
LIC_RS13500
107
LIC_RS13510
97
LIC_RS13515
4
LIC_RS13755
1
LIC_RS13760
33
LIC_RS13855
111
LIC_RS13880
90
LIC_RS13970
85
LIC_RS13975
55
LIC_RS13980
29
LIC_RS14070
29
LIC_RS14075
N
LIC_RS14080
115
LIC_RS14085
90
LIC_RS14090
111
LIC_RS14095
96
LIC_RS14110
30
LIC_RS14115
108
LIC_RS14120
101
LIC_RS14230
82
LIC_RS14300
71
LIC_RS14305
53
LIC_RS14425
74
LIC_RS14430
32
LIC_RS14485
62
LIC_RS14490
60
LIC_RS14520 (gltA)
79
LIC_RS14530
21
LIC_RS14570
32
LIC_RS14615
34
LIC_RS14735 (rplB)
94
LIC_RS14760 (tuf)
109
LIC_RS15120
111
LIC_RS15130
1
LIC_RS15195
80
LIC_RS15200
7
LIC_RS15215
1
LIC_RS15220
31
LIC_RS15250
94
LIC_RS15275
30
LIC_RS15280
102
LIC_RS15510
81
LIC_RS15535
28
LIC_RS15540
108
LIC_RS15925
1
LIC_RS15980
46
LIC_RS16170
82
LIC_RS16175
88
LIC_RS16195
32
LIC_RS16225
82
LIC_RS16230
87
LIC_RS16285
32
LIC_RS16320
64
LIC_RS16350
1
LIC_RS16505
29
LIC_RS16515
72
LIC_RS16565
88
LIC_RS16570
110
LIC_RS16780
107
LIC_RS16785
94
LIC_RS16800
46
LIC_RS16825
71
LIC_RS16830
65
LIC_RS16895
31
LIC_RS16975
74
LIC_RS16980
105
LIC_RS17045
98
LIC_RS17065
30
LIC_RS17070
31
LIC_RS17110 (coaD)
30
LIC_RS17115
28
LIC_RS17180
81
LIC_RS17185
N
LIC_RS17210
66
LIC_RS17225
98
LIC_RS17230
103
LIC_RS17340
33
LIC_RS17345
67
LIC_RS17350
69
LIC_RS17405
33
LIC_RS17410
76
LIC_RS17415
34
LIC_RS17420
29
LIC_RS17445
1
LIC_RS17510
111
LIC_RS17735
20
LIC_RS17740
4
LIC_RS17745
80
LIC_RS17750
34
LIC_RS17790
28
LIC_RS17860
65
LIC_RS17865
1
LIC_RS17870
58
LIC_RS17875
36
LIC_RS17880
N
LIC_RS17890
81
LIC_RS17895
100
LIC_RS17900
71
LIC_RS17905
49
LIC_RS17930
81
LIC_RS17935
59
LIC_RS17965
105
LIC_RS17970
95
LIC_RS18020
60
LIC_RS18025
74
LIC_RS18040
74
LIC_RS18045
64
LIC_RS18075
32
LIC_RS18080
56
LIC_RS18115
61
LIC_RS18170
N
LIC_RS18185
32
LIC_RS18205
68
LIC_RS18310
29
LIC_RS18315
1
LIC_RS18330
101
LIC_RS18335
31
LIC_RS18410
103
LIC_RS18435
7
LIC_RS18440
100
LIC_RS18445
86
LIC_RS18490
5
LIC_RS18495
70
LIC_RS18505
94
LIC_RS18565
1
LIC_RS18695
66
LIC_RS18700
48
LIC_RS18705
34
LIC_RS18710
36
LIC_RS18835
88
LIC_RS19060
116
LIC_RS19065
4
LIC_RS19220
6
LIC_RS19290
64
LIC_RS19305
29
LIC_RS19340
1
LIC_RS19375
30
LIC_RS19385
N
LIC_RS19420
80
LIC_RS19435
78
sender
Auto Definer
curator
Auto Definer
date entered
2017-05-28
datestamp
2017-05-28

Similar profiles (determined by classification schemes)

Experimental schemes are subject to change and are not a stable part of the nomenclature.

Classification schemeClustering methodMismatch thresholdStatusGroup Profiles
Cluster_40_cgMLSTSingle-linkage40experimental752
Test-30Single-linkage30experimental782
Test-300Single-linkage300experimental568
Test-50Single-linkage50experimental722
Test-60Single-linkage60experimental722
Test-80Single-linkage80experimental683

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