Full information on isolate 1530d (id:1510)

Provenance/primary metadata

id
1510
isolate
1530d
alias
1530d
biosample
SAMN12721657
clade
P1
species
interrogans
serogroup
Unknown
serovar
Yeoncheon
isolation year
2014
sequencing year
2019
world region
Melanesia
country
Malaysia
city
Klang
host
human
sample type
Culture
source lab
Genbank
sender
Vallier SORDOILLET, CNR Leptospirose PASTEUR
curator
Jean-Fran├žois Mariet, Institut Pasteur, Paris (E-mail: jean-francois.mariet@pasteur.fr)
update history
8 updates show details
date entered
2023-01-27
datestamp
2024-04-25

Sequence bin

contigs
9
total length
5,013,967 bp
max length
4,318,326 bp
mean length
557,108 bp
N50
4,318,326
L50
1
N90
349,777
L90
2
N95
82,644
L95
4
%GC
35.00
Ns
0
gaps
0
loci tagged
547

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Assembly checks

CheckStatusWarn/fail reason
Number of contigs
Assembly size
Minimum N50
%GC

Annotation quality metrics

Scheme completion

SchemeScheme lociDesignated lociAnnotation
ScoreStatus
cgMLST54553397

Similar isolates (determined by classification schemes)

No similar isolates at any threshold. Show groups

Schemes and loci

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