Sequence bin for Piyasena

Contig summary statistics

Contigs
2
Total length
3,992,782
Minimum length
322,551
Maximum length
3,670,231
Mean length
1,996,391
N50
3,670,231
L50
1
N90
3,670,231
L90
1
N95
322,551
L95
2

FASTAEMBLGBKGFF3

SequenceSequencing methodOriginal designationLengthCommentsLocusStartEndDirectionAnnotation
224920CP0266713670231CP026671.1 [Leptospira borgpetersenii serovar Ceylonica strain Piyasena | 508536.5]LIC_RS00025 49206845 EMBL GBK
LIC_RS00030 68649362
LIC_RS00035 935910315
LIC_RS00095 1790518648
LIC_RS00150 2908629934
LIC_RS00160 3127633390
LIC_RS00205 4138542353
LIC_RS00245 4978851107
LIC_RS00260 5442155263
LIC_RS00335 7480975330
LIC_RS00340 7533176113
LIC_RS00355 7735577723
LIC_RS00380 8239183236
LIC_RS00385 8324383947
LIC_RS00585 103496104221
LIC_RS00580 104218104850
LIC_RS00575 104847105467
LIC_RS00525 112507113571
LIC_RS00625 129138130094
LIC_RS00655 138850139788
LIC_RS00725 157239158696
BACT000063 (rpmH) 167360167521
LIC_RS00810 169984170694
LIC_RS00815 170687172057
LIC_RS01005 182178183164
LIC_RS16895 196918197889
LIC_RS16830 209012210169
LIC_RS16825 210233211624
LIC_RS16800 213965214357
LIC_RS16785 215555216721
LIC_RS16780 216762218234
LIC_RS16570 255699258554
LIC_RS16565 258628261036
LIC_RS16515 266896268233
LIC_RS16505 268615269268
LIC_RS03110 279948280364
lfb1 333375333661
LIC_RS13405 338704339972
LIC_RS13420 343711344121
LIC_RS13425 344173345291
LIC_RS13470 350651351499
LIC_RS15280 388577389806
LIC_RS15275 389832391037
LIC_RS15250 393321394295
LIC_RS03210 406099406323
LIC_RS03215 406330407112
LIC_RS03220 407128407955
LIC_RS03225 407997408521
LIC_RS03230 408521409261
LIC_RS03235 409789410127
LIC_RS16285 416434417291
LIC_RS02350 435765436562
BACT000020 (rpsT) 438215438487
LIC_RS02325 438616439998
LIC_RS02315 441841442887
LIC_RS02310 442904444514
LIC_RS01375 449599450264
LIC_RS01380 450264451322
LIC_RS01395 453377455497
LIC_RS01435 459371460135
LIC_RS16170 468240468788
LIC_RS16175 468802470136
LIC_RS16195 474878475879
LIC_RS16225 485200486171
LIC_RS16230 486168486947
LIC_RS16320 490663492033
LIC_RS16350 495606495893
LIC_RS02740 506098507126
LIC_RS02730 507828509765
LIC_RS02725 510213511328
LIC_RS02720 511629512597
LIC_RS02715 512621513169
LIC_RS09535 569802570674
LIC_RS09545 571140571889
LIC_RS14070 585619586179
LIC_RS14075 586176586709
LIC_RS14080 586711587928
LIC_RS14085 587928588407
LIC_RS14090 588423589757
LIC_RS14095 589754590794
LIC_RS14110 591819593765
LIC_RS14115 593767595464
LIC_RS14120 595461596939
LIC_RS02455 617186618466
LIC_RS02460 618456621119
LIC_RS15980 696264697601
BACT000042 (rplM) 779587780039
BACT000009 (rpsI) 780050780448
LIC_RS03955 780536783358
LIC_RS03960 783355783846
LIC_RS03980 786867788441
LIC_RS03990 790023790850
LIC_RS03870 799850800395
BACT000040 (rplK) 800428800856
BACT000030 (rplA) 800871801563
BACT000039 (rplJ) 801591802124
BACT000036 (rplL) 802175802555
LIC_RS03900 806484810698
BACT000012 (rpsL) 810786811160
BACT000007 (rpsG) 811178811651
LIC_RS13145 846445847722
LIC_RS02780 855891858317
LIC_RS02770 859848861737
LIC_RS14760 876546877751
BACT000010 (rpsJ) 877765878073
BACT000032 (rplC) 878086878706
BACT000033 (rplD) 878724879359
BACT000052 (rplW) 879356879670
LIC_RS14735 879674880513
BACT000031 (rplB) 879674880513
BACT000019 (rpsS) 880521880802
BACT000051 (rplV) 880802881134
BACT000003 (rpsC) 881147881824
BACT000045 (rplP) 881847882260
BACT000058 (rpmC) 882257882541
BACT000017 (rpsQ) 882551882820
BACT000043 (rplN) 882822883214
BACT000053 (rplX) 883214883567
BACT000034 (rplE) 883571884119
BACT000014 (rpsN) 884139884324
BACT000008 (rpsH) 884344884745
BACT000035 (rplF) 884772885311
BACT000047 (rplR) 885315885683
BACT000005 (rpsE) 885685886191
BACT000059 (rpmD) 886203886382
BACT000044 (rplO) 886399886941
secY 886957888339
BACT000065 (rpmJ) 889139889252
BACT000013 (rpsM) 889256889633
BACT000011 (rpsK) 889636890046
BACT000004 (rpsD) 890058890681
LIC_RS14615 890704891681
BACT000046 (rplQ) 891683892180
LIC_RS04720 901264902223
LIC_RS02255 932018933976
LIC_RS02250 934132934695
LIC_RS02240 935397936335
LIC_RS03820 944060945151
LIC_RS02365 955423956202
LIC_RS03035 958468961233
LIC_RS02515 977652978995
LIC_RS02520 979092979817
LIC_RS15925 10356441036396
LIC_RS14230 10422711043521
BACT000056 (rpmA) 10458721046126
BACT000050 (rplU) 10464421046756
LIC_RS02110 10581401058601
LIC_RS02115 10586021059018
LIC_RS02120 10590111061077
LIC_RS04145 10744461075486
LIC_RS03270 11051711105482
LIC_RS03275 11054881106729
LIC_RS01850 11162941117262
LIC_RS01855 11172591119079
LIC_RS01860 11190851119678
LIC_RS01865 11200161120975
LIC_RS01870 11209881121749
LIC_RS15510 11483171149333
LIC_RS13755 12001231200884
LIC_RS13760 12008811201816
LIC_RS03500 12203211221451
LIC_RS03505 12214481222308
LIC_RS03510 12222841222532
LIC_RS03515 12225291223188
LIC_RS04060 12261421226861
LIC_RS04065 12268851227835
LIC_RS04070 12280521230835
LIC_RS04600 12419521242371
LIC_RS04605 12423741242793
LIC_RS13515 12538981254086
LIC_RS13510 12553201256111
BACT000060 (rpmE) 12561681256371
LIC_RS13500 12563921257837
LIC_RS14570 12615121262438
x_1 12643771266368
LIC_RS14530 12886581289590
LIC_RS14520 12910941292383
LIC_RS14490 12977281298495
LIC_RS14485 12986091299049
LIC_RS14430 13050571306082
LIC_RS14425 13060571306974
LIC_RS06110 13296051330999
LIC_RS06115 13311611333143
LIC_RS14305 13352701335602
LIC_RS14300 13356101336368
LIC_RS04520 13577491360814
LIC_RS04525 13608341362207
LIC_RS04530 13622071362758
LIC_RS04540 13634671364690
LIC_RS15535 13694151370101
LIC_RS15540 13734181375943
LIC_RS05190 14057411406223
LIC_RS05185 14062201407344
LIC_RS05180 14074141407749
LIC_RS05225 14113141413338
LIC_RS05230 14133521415154
LIC_RS13170 14415041442853
LIC_RS12770 14692201469993
LIC_RS04340 14763031477226
LIC_RS04345 14772291478038
LIC_RS04350 14780541478875
LIC_RS04360 14799301480304
LIC_RS04365 14803081480529
LIC_RS04370 14805381480915
LIC_RS04375 14809381481198
BACT000002 (rpsB) 14812021482062
LIC_RS04385 14820761482675
LIC_RS04395 14834091483963
LIC_RS04400 14839651484690
LIC_RS04405 14846831485597
LIC_RS04410 14856041486773
LIC_RS04415 14867671488494
LIC_RS04420 14884991490229
LIC_RS04425 14902321491434
LIC_RS04430 14914311492225
LIC_RS04440 14929081495220
LIC_RS04445 14952491497156
LIC_RS04450 14971981497668
LIC_RS18310 15039141504678
LIC_RS18315 15053111505544
LIC_RS18330 15071601508251
LIC_RS18335 15082511509132
LIC_RS05530 15091541510320
LIC_RS05535 15103991510722
LIC_RS05555 15131061515040
LIC_RS05725 15810161581930
LIC_RS05750 15859931586844
LIC_RS06005 16062531606996
LIC_RS06015 16082281608740
LIC_RS06140 16165781617570
LIC_RS06700 16337361634410
LIC_RS06705 16345061635768
LIC_RS05500 16581671659183
LIC_RS05505 16592371660706
LIC_RS11780 16645191665130
LIC_RS11770 16654491666837
LIC_RS11765 16668421667858
LIC_RS11760 16678551668619
LIC_RS06815 16999141700402
LIC_RS06825 17029901703877
LIC_RS06850 17122621713902
LIC_RS06855 17139161714206
LIC_RS07115 17227241723371
LIC_RS07125 17241001725464
LIC_RS07180 17365241738638
LIC_RS07190 17388731740165
LIC_RS07195 17403261742329
LIC_RS07200 17425481742817
LIC_RS07210 17461671747273
LIC_RS07215 17477231749432
LIC_RS07220 17494291749914
LIC_RS07240 17522021753941
LIC_RS07260 17561691756762
LIC_RS07265 17567791758041
LIC_RS07445 17932801794644
LIC_RS07450 17946501795507
LIC_RS07455 17955041799034
LIC_RS07470 18006711803655
LIC_RS07475 18036571805072
LIC_RS07480 18051001805390
LIC_RS07485 18053871806844
LIC_RS07490 18068411807611
LIC_RS10365 18117451812401
LIC_RS10360 18124911813915
LIC_RS10355 18139121814877
LIC_RS10350 18148931815747
LIC_RS10345 18158291817136
LIC_RS06950 18225581823823
LIC_RS07020 18408181841153
LIC_RS07025 18413851842446
LIC_RS07035 18432931844081
LIC_RS07040 18440781844341
LIC_RS07045 18443481845127
LIC_RS07055 18466691848786
LIC_RS07060 18488381850139
LIC_RS07075 18517131852513
LIC_RS07080 18525391854524
LIC_RS07095 18561331856414
LIC_RS10315 18579171859893
LIC_RS10100 18953021895616
LIC_RS10095 18956401897799
LIC_RS10090 18978151898945
LIC_RS10065 19028381903410
LIC_RS09955 19140241914617
LIC_RS09945 19150021916024
LIC_RS09940 19160261916583
LIC_RS09925 19179571918709
LIC_RS09920 19188241921538
LIC_RS09905 19227111924108
LIC_RS09790 19502741951800
LIC_RS09785 19518021952584
LIC_RS09685 19723201973330
LIC_RS09675 19747741975748
LIC_RS09605 19879621989200
LIC_RS09600 19892701990532
LIC_RS09590 19911721992023
LIC_RS09475 19959621996711
LIC_RS09470 19967431997507
LIC_RS09465 19975111998290
LIC_RS09460 19982871999816
LIC_RS09450 20007872001404
LIC_RS09420 20060752006905
LIC_RS09415 20070422008340
LIC_RS09405 20104212011353
LIC_RS09400 20113552012302
LIC_RS09385 20133732014785
LIC_RS09380 20147822015657
LIC_RS09365 20173182018343
LIC_RS09350 20204132020679
LIC_RS09305 20280702028657
LIC_RS09290 20310682032465
LIC_RS09250 20391622039488
LIC_RS09245 20394852041716
LIC_RS09230 20450172046048
LIC_RS09225 20460452046293
LIC_RS09215 20466072046834
LIC_RS09205 20472122047985
LIC_RS09200 20479822048899
LIC_RS09175 20526802054170
LIC_RS09150 20574342058855
LIC_RS09145 20588952059887
LIC_RS09135 20611572062866
LIC_RS09130 20629322064149
LIC_RS09105 20687162069363
LIC_RS09090 20710242072004
LIC_RS09070 20751592076223
LIC_RS09065 20765942076770
LIC_RS09030 20823792082786
LIC_RS09025 20828032083879
LIC_RS09020 20838972085117
LIC_RS08940 21013082102618
LIC_RS08935 21044952105556
LIC_RS08930 21055532106155
LIC_RS08735 21430112144402
BACT000021 (rpsU) 21522182152427
LIC_RS08685 21524852152931
LIC_RS08675 21547652156522
LIC_RS08660 21600902161307
LIC_RS07745 21872302187766
LIC_RS07760 21883042188612
LIC_RS07775 21918372193489
LIC_RS07780 21934952196242
LIC_RS07795 21963812197427
LIC_RS07805 21979182198430
LIC_RS07825 22039492204311
LIC_RS07855 22171642218015
LIC_RS07865 22183432218894
LIC_RS08760 22265502229456
LIC_RS08500 22633562264501
LIC_RS08470 22672232267666
LIC_RS08465 22679682268594
LIC_RS08460 22685982270133
LIC_RS08445 22717202272370
LIC_RS08405 22771972278363
LIC_RS08345 22908252292870
LIC_RS08305 23020142302463
LIC_RS08300 23024662303071
LIC_RS08280 23061912306961
LIC_RS08270 23074482308422
LIC_RS08265 23084372310194
LIC_RS08230 23160112316700
LIC_RS08225 23167452317788
LIC_RS08220 23177902318668
LIC_RS08210 23189872319817
LIC_RS08190 23232092323751
LIC_RS08180 23247052325274
LIC_RS08175 23252622326812
LIC_RS08150 23305352331662
LIC_RS08145 23316692332937
LIC_RS08090 23435172344044
LIC_RS08060 23487242349200
LIC_RS08055 23492232350449
LIC_RS08050 23504542352127
LIC_RS08045 23521312353927
LIC_RS08040 23539322354837
BACT000048 (rplS) 23617712362181
LIC_RS07985 23621782362846
BACT000016 (rpsP) 23635892363855
LIC_RS07965 23640852364729
LIC_RS07940 23694452370785
LIC_RS07935 23707922372582
LIC_RS07930 23725962372859
LIC_RS07925 23728402373796
LIC_RS07920 23738002375221
LIC_RS07915 23752182375943
LIC_RS07900 23779102378773
LIC_RS07895 23787702380392
LIC_RS07890 23804942380970
LIC_RS07685 23850992385857
LIC_RS07680 23858642386058
LIC_RS07640 23957972396549
LIC_RS07580 24132982414194
LIC_RS10215 24355672436247
LIC_RS10220 24362662438179
LIC_RS10265 24412762443081
LIC_RS10590 24715772472110
LIC_RS10595 24721222472472
LIC_RS10670 24860672487074
LIC_RS10675 24870782488268
LIC_RS10705 24905752491708
LIC_RS10710 24917082492700
LIC_RS10755 25025712504991
LIC_RS10765 25059782507792
LIC_RS10770 25077922509120
BACT000038 (rplI) 25091362509585
BACT000018 (rpsR) 25095952509906
LIC_RS10785 25099192510368
BACT000006 (rpsF) 25103612510636
LIC_RS11310 26355692636585
LIC_RS11320 26369452638951
LIC_RS11445 26520952652559
LIC_RS11460 26535292654590
LIC_RS11470 26554682655716
LIC_RS11495 26590072660824
LIC_RS11500 26608262662424
LIC_RS06555 26718882672991
LIC_RS06550 26731372674018
LIC_RS06535 26756332676925
LIC_RS06510 26937182693945
LIC_RS06490 26977552699701
LIC_RS06485 26997032700215
LIC_RS06480 27002152701321
LIC_RS06475 27013932702415
LIC_RS06470 27026062704168
LIC_RS06395 27166242718027
LIC_RS06390 27180532718913
LIC_RS06385 27189282720439
LIC_RS06375 27209942721515
LIC_RS06370 27215192721821
LIC_RS06340 27268802727689
LIC_RS12300 27314562732877
LIC_RS12325 27351532737945
LIC_RS12330 27380182739850
LIC_RS12375 27488192749931
LIC_RS06745 27640222765140
LIC_RS06740 27652872765754
LIC_RS11590 28077142809996
LIC_RS11595 28100132811149
LIC_RS11625 28153312815999
x_2 28408812842191
LIC_RS13855 28500722852162
BACT000015 (rpsO) 28521592852425
LIC_RS13880 28564522857840
LIC_RS12485 28627432863750
BACT000061 (rpmF) 28637562863956
LIC_RS12500 28642302864847
BACT000001 (rpsA) 28656162867298
LIC_RS12530 28702532871344
LIC_RS12540 28718672872652
LIC_RS12545 28726692873031
LIC_RS12550 28730332874100
LIC_RS12555 28741062877300
LIC_RS12560 28773002877797
BACT000049 (rplT) 28799162880269
BACT000064 (rpmI) 28802692880472
LIC_RS12660 28906212892024
LIC_RS12665 28920382893276
LIC_RS12675 28958142896770
LIC_RS12680 28968772897695
LIC_RS11785 29011692902347
LIC_RS12935 29444312945501
LIC_RS12945 29463402947176
LIC_RS12980 29507092951305
LIC_RS12990 29525882953526
LIC_RS12995 29535292955457
LIC_RS13010 29566282957638
LIC_RS13015 29576132958359
LIC_RS13020 29583562959675
LIC_RS13025 29596812960799
LIC_RS11805 29813292982894
LIC_RS11815 29835312984196
LIC_RS11825 29850862985436
LIC_RS13970 30219413023227
LIC_RS13975 30237523024279
LIC_RS13980 30242793025079
16S_borgpetersenii 30600613061565
LIC_RS12210 30862673086815
LIC_RS12250 30922473094088
LIC_RS13185 31018263102998
LIC_RS13190 31030113103886
LIC_RS13195 31041083105688
LIC_RS13210 31074223108270
LIC_RS05885 31103233111702
LIC_RS05880 31116993112337
LIC_RS05875 31124513114400
LIC_RS05855 31176313118740
LIC_RS05850 31187423119551
LIC_RS05845 31195543120459
LIC_RS05360 31266323127936
LIC_RS05355 31279713129134
LIC_RS05300 31416813142022
LIC_RS13265 31533133154569
LIC_RS15195 31859523186845
LIC_RS15200 31868483187309
LIC_RS15215 31894403189721
LIC_RS15220 31899843191537
LIC_RS03705 31921613194299
LIC_RS03700 31943163195728
LIC_RS15130 32093113209772
LIC_RS01495 32479803248264
LIC_RS01610 32608673261259
LIC_RS01605 32612903264190
LIC_RS01555 33558393356270
LIC_RS01550 33563363356797
LIC_RS01545 33568003357183
LIC_RS01635 33591533360349
LIC_RS01645 33610893361526
LIC_RS01660 33636853363879
LIC_RS01680 33675963368570
LIC_RS01690 33697223370858
LIC_RS01745 33795973380913
LIC_RS01760 33821463384689
LIC_RS01210 33857953386469
LIC_RS01205 33864713387844
LIC_RS01160 33958083396707
LIC_RS01150 33972073400737
LIC_RS01095 34116623413266
LIC_RS01090 34132763414277
LIC_RS01070 34165313417400
LIC_RS17180 34276423428370
LIC_RS17185 34283673429017
LIC_RS17210 34318063433371
LIC_RS17225 34344873435875
LIC_RS17230 34358723438007
LIC_RS17340 34630083464258
LIC_RS17345 34642583465175
LIC_RS17350 34651723465909
LIC_RS03010 34835863485484
LIC_RS02035 34948633495198
LIC_RS02030 34953123497255
LIC_RS02025 34973203497490
LIC_RS17115 35277523528165
LIC_RS17110 35281753528657
LIC_RS17070 35346243535553
LIC_RS17065 35355603536288
LIC_RS17045 35400503541447
LIC_RS16980 35465383547803
LIC_RS16975 35478253549135
LIC_RS17405 35530163554026
LIC_RS17410 35540233555066
LIC_RS17415 35550633556052
LIC_RS17420 35560693557031
LIC_RS17445 35614303561666
LIC_RS17510 35915403593504
LIC_RS17735 36254583625712
LIC_RS17740 36257133626165
LIC_RS17745 36263803627648
LIC_RS17750 36276853629595
LIC_RS17790 36363783636707
LIC_RS17860 36457503647279
LIC_RS17865 36472843647631
LIC_RS17870 36475793648217
LIC_RS17875 36482203649794
LIC_RS17880 36497983650640
LIC_RS17890 36527433653996
LIC_RS17895 36539893654798
LIC_RS17900 36549203655939
LIC_RS17905 36559403656287
LIC_RS17930 36576553658530
LIC_RS17935 36585333659294
LIC_RS17965 36659933667900
LIC_RS17970 36680423668965
224919CP026672322551CP026672.1 [Leptospira borgpetersenii serovar Ceylonica strain Piyasena | 508536.5]LIC_RS19420 24713481 EMBL GBK
LIC_RS19385 1192012969
LIC_RS19375 1497916433
LIC_RS19340 1998520263
LIC_RS19305 2216422889
LIC_RS19290 2392024867
LIC_RS19220 4113341975
LIC_RS18565 6652667077
LIC_RS18695 108149110041
LIC_RS18700 110034110516
LIC_RS18705 110513112123
LIC_RS18710 112398113285
LIC_RS18835 139145140560
BACT000062 (rpmG) 152805152969
LIC_RS19060 162521164719
LIC_RS19065 164727165779
LIC_RS18505 183388184614
LIC_RS18495 185302186153
LIC_RS18490 186150186689
LIC_RS18445 195366196277
LIC_RS18440 196441198189
LIC_RS18435 198262199596
LIC_RS18410 205500206810
LIC_RS18205 276076277887
LIC_RS18185 281253282191
LIC_RS18170 283890284879
LIC_RS18115 293513294781
LIC_RS18080 299452300159
LIC_RS18075 300152301069
LIC_RS18045 305933307282
LIC_RS18040 307279308301
LIC_RS18025 309890311215
LIC_RS18020 311212312165