Sequence bin for 56601

Contig summary statistics

Contigs
2
Total length
4,698,134
Minimum length
359,372
Maximum length
4,338,762
Mean length
2,349,067
N50
4,338,762
L50
1
N90
4,338,762
L90
1
N95
359,372
L95
2

FASTAEMBLGBKGFF3

SequenceSequencing methodOriginal designationLengthCommentsLocusStartEndDirectionAnnotation
363051unknownNC_004342.24338762Leptospira interrogans serovar Lai str. 56601 chromosome I, complete sequenceLIC_RS00025 66268545 EMBL GBK
LIC_RS00030 856411068
LIC_RS00035 1107312062
LIC_RS00095 2229823041
LIC_RS00150 3506135909
LIC_RS00160 3745039426
LIC_RS00205 4883649804
pntA_1 (pntA_1) 5634756871
pntA_2 (pntA_2) 5634756871
LIC_RS00245 5772359042
LIC_RS00260 6236463206
LIC_RS00335 8413984660
LIC_RS00340 8466185443
LIC_RS00355 8747287840
LIC_RS00380 9249793342
LIC_RS00385 9334994053
LIC_RS00525 122863123927
LIC_RS00575 130774131394
LIC_RS00585 132020132745
LIC_RS00625 142648143604
LIC_RS00655 152751153689
LIC_RS00725 171412172860
BACT000063 (rpmH) 184417184578
LIC_RS00810 187054187764
LIC_RS00815 187757189127
LIC_RS01005 221168222106
LIC_RS01070 233785234654
LIC_RS01090 236895237896
LIC_RS01095 237907239511
LIC_RS01150 252765256286
LIC_RS01160 257323258222
LIC_RS01205 268640270013
LIC_RS01210 270015270692
LIC_RS01375 306151306816
LIC_RS01380 306816307871
LIC_RS01395 310065312185
LIC_RS01435 319295320065
lfb1 320301320578
LIC_RS01495 332469332753
LIC_RS01500 332756334156
LIC_RS01545 341672342055
LIC_RS01550 342058342519
LIC_RS01555 342585343016
LIC_RS01605 351774354668
LIC_RS01610 354708355100
LIC_RS01635 360124361251
LIC_RS01645 362337362774
LIC_RS01660 365126365314
LIC_RS01680 369068370039
LIC_RS01690 370714371850
LIC_RS01745 382317383630
LIC_RS01760 385170387710
LIC_RS01850 405457406425
LIC_RS01855 406422408242
LIC_RS01860 408248408841
LIC_RS01865 408966409925
LIC_RS01870 409937410698
LIC_RS02025 447171447341
LIC_RS02030 447413449353
LIC_RS02035 449857450192
LIC_RS02110 461447461902
LIC_RS02115 461903462319
LIC_RS02120 462312464378
LIC_RS15540 538278540803
LIC_RS15535 541361542047
LIC_RS15510 549844550860
LIC_RS15280 615341616570
LIC_RS15275 616589617791
lipL41_2 (lipL41_2) 620281620773
lipL41_3 (lipL41_3) 620282620773
LIC_RS15250 621517622491
LIC_RS15220 631181632731
LIC_RS15215 633754634035
LIC_RS15200 636165636641
LIC_RS15195 636644637537
LIC_RS15130 652569653030
LIC_RS15120 653751655751
LIC_RS14760 760917762122
BACT000010 (rpsJ) 762137762445
BACT000032 (rplC) 762457763077
BACT000033 (rplD) 763095763730
BACT000052 (rplW) 763727764041
LIC_RS14735 764045764884
BACT000031 (rplB) 764045764884
BACT000019 (rpsS) 764893765174
BACT000051 (rplV) 765174765506
BACT000003 (rpsC) 765519766196
BACT000045 (rplP) 766219766632
BACT000058 (rpmC) 766629766913
BACT000017 (rpsQ) 766923767192
BACT000043 (rplN) 767194767586
BACT000053 (rplX) 767586767945
BACT000034 (rplE) 767949768497
BACT000014 (rpsN) 768517768702
BACT000008 (rpsH) 768722769123
BACT000035 (rplF) 769150769689
BACT000047 (rplR) 769693770061
BACT000005 (rpsE) 770063770569
BACT000059 (rpmD) 770582770761
BACT000044 (rplO) 770777771319
secY 771334772716
secY_3 (secY_3) 772183772683
adk_3 (adk_3) 772796773224
adk_2 (adk_2) 772796773225
BACT000065 (rpmJ) 773517773630
BACT000013 (rpsM) 773634774011
BACT000011 (rpsK) 774014774424
BACT000004 (rpsD) 774436775059
LIC_RS14615 775082776059
BACT000046 (rplQ) 776061776576
LIC_RS14570 788128789054
LIC_RS14530 795980796927
LIC_RS14520 798563799852
LIC_RS14490 806855807622
LIC_RS14485 807742808182
LIC_RS14430 815428816453
LIC_RS14425 816428817345
LIC_RS14305 839332839664
LIC_RS14300 839671840429
BACT000050 (rplU) 849363849677
BACT000056 (rpmA) 849990850244
LIC_RS14230 852312853562
LIC_RS14120 880510882048
LIC_RS14115 882045883733
LIC_RS14110 883735885684
LIC_RS14095 886722887762
LIC_RS14090 887759889090
LIC_RS14085 889106889585
LIC_RS14080 889585890802
LIC_RS14070 891337891897
LIC_RS13980 912868913668
LIC_RS13975 913668914195
LIC_RS13970 914829916115
LIC_RS13880 935862937244
BACT000015 (rpsO) 941201941467
LIC_RS13855 941479943575
LIC_RS13760 975339976274
LIC_RS13755 976271977032
LIC_RS13515 10265581026746
LIC_RS13510 10267431027534
BACT000060 (rpmE) 10275931027796
LIC_RS13500 10278171029265
LIC_RS13470 10415801042428
LIC_RS13425 10503951051513
LIC_RS13420 10515671051977
LIC_RS13405 10557211056989
LIC_RS13265 10856521086908
LIC_RS13210 10986041099452
LIC_RS13195 11012011102778
LIC_RS13190 11030651103940
LIC_RS13185 11039531105125
LIC_RS13170 11076761109025
LIC_RS13145 11133041114581
LIC_RS13135 11159601117969
LIC_RS13025 11416511142766
LIC_RS13020 11427751144088
LIC_RS13015 11440851144831
LIC_RS13010 11448061145816
LIC_RS12995 11469521148880
LIC_RS12990 11488851149823
LIC_RS12980 11512081151810
LIC_RS12945 11598161160661
LIC_RS12935 11614991162569
LIC_RS12770 12031541203927
LIC_RS12680 12198111220629
LIC_RS12675 12207361221692
LIC_RS12665 12242151225474
LIC_RS12660 12254881226891
sucA_1 (sucA_1) 12276351228081
BACT000064 (rpmI) 12465341246737
BACT000049 (rplT) 12467371247090
LIC_RS12560 12493101249804
LIC_RS12555 12498041253016
LIC_RS12550 12530221254095
LIC_RS12545 12540971254459
LIC_RS12540 12544771255262
LIC_RS12530 12557851256876
BACT000001 (rpsA) 12598281261510
LIC_RS12500 12622781262895
BACT000061 (rpmF) 12631921263392
LIC_RS12485 12633981264405
LIC_RS12375 12836241284724
LIC_RS12330 12987111300540
LIC_RS12325 13006311303405
LIC_RS12300 13066871308108
LIC_RS12250 13215661323404
LIC_RS12210 13321271332675
pfkB_1 (pfkB_1) 13867141387145
LIC_RS11825 14384521438802
LIC_RS11815 14396921440357
LIC_RS11805 14409931442552
LIC_RS11785 14471801448361
LIC_RS11780 14484141449025
LIC_RS11770 14493441450732
LIC_RS11765 14507371451753
LIC_RS11760 14517501452514
x_2 14589331460243
LIC_RS11625 14807201481388
LIC_RS11595 14863211487448
LIC_RS11590 14874651489747
LIC_RS11500 15123701513968
LIC_RS11495 15139701515793
LIC_RS11470 15192401519497
LIC_RS11460 15203691521430
LIC_RS11445 15224011522865
LIC_RS11320 15526871554708
LIC_RS11310 15550711556081
BACT000006 (rpsF) 16745861674861
LIC_RS10785 16748541675306
BACT000018 (rpsR) 16753181675629
BACT000038 (rplI) 16756391676088
LIC_RS10770 16761061677434
LIC_RS10765 16774671679272
LIC_RS10755 16802681682682
LIC_RS10710 16909261691918
LIC_RS10705 16919181693051
tpiA_1 (tpiA_1) 16944091694834
LIC_RS10675 16992121700402
LIC_RS10670 17004061701413
LIC_RS10595 17182901718640
LIC_RS10590 17186521719185
LIC_RS10365 18350621835724
LIC_RS10360 18358141837229
LIC_RS10355 18372261838191
LIC_RS10350 18382071839061
LIC_RS10345 18391431840450
LIC_RS10315 18475091849485
LIC_RS10265 18608931862695
LIC12008 18648581865583
LIC_RS10220 18687601870673
LIC_RS10215 18706921871372
LIC_RS10100 18976701897984
LIC_RS10095 18980071900166
LIC_RS10090 19001841901314
LIC_RS10065 19057941906366
LIC_RS09955 19222921922885
LIC_RS09945 19232791924289
LIC_RS09940 19243001924857
LIC_RS09925 19262391926988
LIC_RS09920 19270931929825
LIC_RS09905 19309121932318
LIC_RS09790 19648211966347
LIC_RS09785 19663481967130
LIC_RS09685 19836441984663
LIC_RS09675 19860671987041
LIC_RS09605 20003482001586
LIC_RS09600 20016522002914
LIC_RS09590 20035422004393
LIC_RS09545 20135842014333
LIC_RS09535 20147942015666
LIC_RS09475 20274792028228
LIC_RS09470 20282582029025
LIC_RS09465 20290292029808
LIC_RS09460 20298052031259
LIC_RS09450 20322752032892
LIC_RS09420 20387352039565
LIC_RS09415 20396932040979
LIC_RS09405 20420872043019
LIC_RS09400 20430212043968
LIC_RS09385 20450442046456
LIC_RS09380 20464532047328
LIC_RS09365 20494942050519
LIC_RS09350 20527462053036
LIC_RS09305 20618042062391
LIC_RS09290 20647812066178
LIC_RS09280 20668342067835
LIC_RS09250 20731492073484
LIC_RS09245 20734812075721
LIC_RS09230 20790152080046
LIC_RS09215 20806022080853
LIC_RS09205 20830052083778
LIC_RS09200 20837752084692
LIC_RS09175 20885692090059
LIC_RS09150 20935662094987
LIC_RS09145 20950232096009
LIC_RS09135 20980622099771
LIC_RS09130 20998232101037
LIC_RS09105 21059472106588
LIC_RS09090 21082342109214
LIC_RS09070 21123662113421
LIC_RS09065 21137942113970
LIC_RS09030 21202772120684
LIC_RS09025 21207012121777
LIC_RS09020 21217942123014
BACT000057 (rpmB) 21295342129818
LIC_RS08940 21415532142863
LIC_RS08935 21433002144361
LIC_RS08930 21443582145002
LIC_RS08760 21915552194401
LIC_RS08735 21977262199117
BACT000021 (rpsU) 22102382210447
LIC_RS08685 22105072210953
LIC_RS08675 22127852214542
LIC_RS08660 22168582218075
LIC_RS08500 22547162255861
LIC_RS08470 22585782259030
LIC_RS08465 22594442260070
LIC_RS08460 22600742261609
LIC_RS08445 22631802263824
LIC_RS08405 22725432273709
LIC_RS08345 22857842287829
LIC_RS08305 22979122298361
LIC_RS08300 22983642298969
LIC_RS08280 23022462303016
LIC_RS08270 23035202304491
LIC_RS08265 23045062306263
LIC_RS08230 23135802314269
LIC_RS08225 23143162315359
LIC_RS08220 23153612316239
LIC_RS08210 23165642317394
LIC_RS08190 23228832323425
LIC_RS08180 23245672325139
LIC_RS08175 23251272326677
LIC_RS08150 23309352332065
LIC_RS08145 23320692333337
LIC_RS08090 23410782341605
LIC_RS08060 23463362346812
LIC_RS08055 23468342348060
LIC_RS08050 23480662349739
LIC_RS08045 23497432351590
LIC_RS08040 23515382352446
BACT000048 (rplS) 23598862360302
LIC_RS07985 23602622360957
BACT000016 (rpsP) 23617002361966
LIC_RS07965 23627402363387
LIC_RS07940 23682342369580
LIC_RS07935 23695882371378
LIC_RS07930 23713922371655
LIC_RS07925 23716272372592
LIC_RS07920 23725972374018
LIC_RS07915 23740152374740
LIC_RS07900 23767162377579
LIC_RS07895 23775822379198
LIC_RS07890 23793972379873
LIC_RS07865 23844552385006
LIC_RS07855 23853442386195
LIC_RS07825 23938322394194
LIC_RS07805 23996982400213
LIC_RS07795 24007072401750
LIC_RS07780 24025802405324
LIC_RS07775 24053312406983
LIC_RS07760 24102192410527
LIC_RS07745 24115002412036
rrs2_3 (rrs2_3) 24183602418809
LIC_RS07685 24335342434292
LIC_RS07680 24342992434493
LIC_RS07640 24444572445209
LIC_RS07580 24563302457226
LIC_RS07490 24801752480945
LIC_RS07485 24809422482405
LIC_RS07480 24824022482692
LIC_RS07475 24827192484134
LIC_RS07470 24841372487112
LIC_RS07455 24887482492308
LIC_RS07450 24923052493162
LIC_RS07445 24931932494476
LIC_RS07265 25418552543117
LIC_RS07260 25431282543724
LIC_RS07240 25459392547681
LIC_RS07220 25510052551490
LIC_RS07215 25514872553196
LIC_RS07210 25536262554735
LIC_RS07200 25579052558174
LIC_RS07195 25585152560518
LIC_RS07190 25606902561982
LIC_RS07180 25622112564316
LIC_RS07125 25786452580009
LIC_RS07115 25807382581385
LIC_RS07095 25846592584940
LIC_RS07080 25864002588385
LIC_RS07075 25884112589211
LIC_RS07060 25907612592041
LIC_RS07055 25920942594211
LIC_RS07045 25961582596937
LIC_RS07040 25969442597207
LIC_RS07035 25972042598007
LIC_RS07025 25988582599922
LIC_RS07020 26004902600816
LIC_RS06950 26179432619181
lipL32_3 (lipL32_3) 26199402620389
lipL32_2 (lipL32_2) 26199402620389
LIC_RS06855 26382672638557
LIC_RS06850 26385722640212
LIC_RS06825 26439272644814
LIC_RS06815 26476652648138
LIC_RS06745 26735752674732
LIC_RS06740 26748402675307
LIC_RS06705 26812352682485
LIC_RS06700 26825692683243
LIC_RS06555 27192622720371
LIC_RS06535 27230092724298
LIC_RS06510 27307092730936
mreA_2 (mreA_2) 27339502734384
mreA_1 (mreA_1) 27339502734384
LIC_RS06490 27351782737121
LIC_RS06485 27371232737635
LIC_RS06480 27376322738729
LIC_RS06475 27388032739825
LIC_RS06470 27400172741579
LIC_RS06395 27580782759481
LIC_RS06390 27594992760359
LIC_RS06385 27603742761885
LIC_RS06375 27624402762961
LIC_RS06370 27629652763264
LIC_RS06340 27672382768047
LIC_RS06140 28224962823488
LIC_RS06115 28271722829154
LIC_RS06110 28293892830783
LIC_RS06015 28569952857507
LIC_RS06005 28587122859455
LIC_RS05885 28869632888342
LIC_RS05880 28883392888977
LIC_RS05875 28890942891034
LIC_RS05855 28941172895226
LIC_RS05850 28952282896043
LIC_RS05845 28960462896954
LIC_RS05750 29182982919146
LIC_RS05725 29230502923964
LIC_RS05555 29667472968675
LIC_RS05535 29719142972237
LIC_RS05530 29723142973480
LIC_RS05505 29789242980387
LIC_RS05500 29804412981457
LIC_RS05360 30177003019004
LIC_RS05355 30190453020142
LIC_RS05300 30392563039597
LIC_RS05230 30583193060163
LIC_RS05225 30601323062174
16S_interrogans 30640673065571
rrs2_3 (rrs2_3) 30650243065473
LIC_RS05190 30716383072120
LIC_RS05185 30721173073241
LIC_RS05180 30733123073647
caiB_1 (caiB_1) 31277723128173
x_1 31430603145051
LIC_RS04720 31987933199752
LIC_RS04605 32237233224142
LIC_RS04600 32241453224555
LIC_RS04540 32361343237357
LIC_RS04530 32379593238510
LIC_RS04525 32385103239883
LIC_RS04520 32399033243010
LIC_RS04450 32576153258091
LIC_RS04445 32581253260029
LIC_RS04440 32600623262374
LIC_RS04430 32630383263832
LIC_RS04425 32638293265022
LIC_RS04420 32650253266755
LIC_RS04415 32667613268488
LIC_RS04410 32684823269651
LIC_RS04405 32696583270566
LIC_RS04400 32705593271284
LIC_RS04395 32712863271840
LIC_RS04385 32725803273179
BACT000002 (rpsB) 32731913274075
LIC_RS04375 32740793274339
LIC_RS04370 32743623274739
LIC_RS04365 32747483274969
LIC_RS04350 32764083277229
LIC_RS04345 32772423278054
LIC_RS04340 32780583278981
LIC_RS04145 33320953333135
LIC_RS04070 33457153348495
LIC_RS04065 33486923349639
LIC_RS04060 33496633350382
LIC_RS03990 33663103367137
LIC_RS03980 33688123370440
LIC_RS03960 33733253373816
LIC_RS03955 33738133376746
BACT000009 (rpsI) 33768303377228
BACT000042 (rplM) 33772393377688
BACT000007 (rpsG) 33821303382603
BACT000012 (rpsL) 33826213382995
LIC_RS03900 33833933387607
BACT000036 (rplL) 33915143391897
BACT000039 (rplJ) 33919473392480
BACT000030 (rplA) 33925083393200
BACT000040 (rplK) 33932073393635
LIC_RS03870 33936623394207
LIC_RS03820 34002663401357
LIC_RS03705 34268353428973
LIC_RS03700 34289843430408
LIC_RS03515 34818663482525
LIC_RS03510 34825223482770
LIC_RS03505 34827463483603
LIC_RS03500 34836003484733
LIC_RS03275 35211673522408
LIC_RS03270 35224143522725
LIC_RS03235 35306583530996
LIC_RS03230 35319423532685
LIC_RS03225 35334213533945
LIC_RS03220 35339863534813
LIC_RS03215 35348293535611
LIC_RS03210 35356173535841
LIC_RS03110 35613513561767
LIC_RS03035 35831303585883
LIC_RS02780 36479213650347
LIC_RS02770 36518843653764
LIC_RS02740 36629333663961
LIC_RS02730 36646483666588
LIC_RS02725 36668813667999
LIC_RS02720 36682853669253
LIC_RS02715 36692773669825
LIC_RS02520 37211213721846
LIC_RS02515 37223553723704
LIC_RS02460 37358123738460
LIC_RS02455 37384503739730
LIC_RS02365 37621963762975
LIC_RS02350 37658473766638
BACT000020 (rpsT) 37688813769147
LIC_RS02325 37692673770649
LIC_RS02315 37724903773536
LIC_RS02310 37735533775163
LIC_RS02255 37864933788460
LIC_RS02250 37886203789183
LIC_RS02240 37898863790824
glmU_1 (glmU_1) 37910313791474
glmU_2 (glmU_2) 37910313791474
LIC_RS15925 38453213846073
LIC_RS15980 38607073862044
LIC_RS16170 39162333916775
LIC_RS16175 39167913918125
LIC_RS16195 39228703923871
LIC_RS16225 39298923930863
LIC_RS16230 39308603931639
LIC_RS16285 39399503940807
LIC_RS16320 39485863949911
LIC_RS16350 39562783956565
LIC_RS16505 40031914003859
LIC_RS16565 40146144017040
LIC_RS16570 40171194019965
icdA_2 (icdA_2) 40466474047203
icdA_3 (icdA_3) 40466494047203
LIC_RS16780 40675554069027
LIC_RS16785 40690694070235
LIC_RS16800 40728374073232
LIC_RS16825 40766084077999
LIC_RS16830 40780684079225
LIC_RS16895 40949934095964
LIC_RS16975 41148834116193
LIC_RS16980 41162094117474
LIC_RS17045 41262744127671
LIC_RS17065 41313874132115
LIC_RS17070 41321204133049
LIC_RS17110 41452774145759
LIC_RS17115 41457694146182
LIC_RS17180 41597904160518
LIC_RS17185 41605154161165
LIC_RS17210 41648674166432
LIC_RS17225 41675474168935
LIC_RS17230 41689324171067
LIC_RS17340 41970004198250
LIC_RS17345 41982504199167
LIC_RS17350 41991644199904
LIC_RS17405 42073694208379
LIC_RS17410 42083764209419
LIC_RS17415 42094164210417
LIC_RS17420 42104144211367
LIC_RS17445 42167024216938
LIC_RS17510 42362674238231
LIC_RS17735 42883004288554
LIC_RS17740 42885544289006
LIC_RS17745 42890484290316
LIC_RS17750 42903544292264
LIC_RS17790 42990294299358
LIC_RS17860 43111244312629
LIC_RS17865 43126344312981
LIC_RS17870 43129294313567
LIC_RS17875 43139574315531
LIC_RS17880 43155354316383
LIC_RS17890 43188364320089
LIC_RS17895 43200824320891
LIC_RS17900 43210124322031
LIC_RS17905 43220314322378
LIC_RS17930 43247124325587
LIC_RS17935 43255904326351
LIC_RS17965 43346194336526
LIC_RS17970 43366704337593
363052unknownNC_004343.2359372Leptospira interrogans serovar Lai str. 56601 chromosome II, complete sequenceLIC_RS18020 88609813 EMBL GBK
LIC_RS18025 981011141
LIC_RS18040 1273713759
LIC_RS18045 1375615105
LIC_RS18075 2231123228
LIC_RS18080 2322123928
LIC_RS18115 2855829826
LIC_RS18185 4354644484
LIC_RS18205 4784749670
LIC_RS18310 7274973513
LIC_RS18315 7400674239
LIC_RS18330 7599577080
LIC_RS18335 7708077961
LIC_RS18410 9561296922
LIC_RS18435 103023104318
LIC_RS18440 104517106262
LIC_RS18445 106440107315
LIC_RS18490 118185118724
LIC_RS18495 118721119572
LIC_RS18505 120256121482
LIC_RS18565 137700138251
LIC_RS18695 165786167675
LIC_RS18700 167668168138
LIC_RS18705 168135169745
LIC_RS18710 170187171074
LIC_RS18835 200812202224
BACT000062 (rpmG) 216804216968
LIC_RS19060 272097274295
LIC_RS19065 274308275363
LIC_RS19220 307838308680
LIC_RS19290 325391326365
LIC_RS19305 327884328609
LIC_RS19340 333256333534
LIC_RS19375 340871342331
LIC_RS19420 353780354790
LIC_RS19435 357143357988