Sequence bin for 202000073

Contig summary statistics

Contigs
2
Total length
3,917,612
Minimum length
321,405
Maximum length
3,596,207
Mean length
1,958,806
N50
3,596,207
L50
1
N90
3,596,207
L90
1
N95
321,405
L95
2

FASTAEMBLGBKGFF3

SequenceSequencing methodOriginal designationLengthCommentsLocusStartEndDirectionAnnotation
401551NZ_CP072624.13596207Leptospira borgpetersenii strain FMAS_PN1 chromosome 1, complete sequenceLIC_RS00025 50626987 EMBL GBK
LIC_RS00030 70069504
LIC_RS00035 950110457
LIC_RS00095 1804718790
LIC_RS00150 2922830076
LIC_RS00160 3141833532
LIC_RS00205 4152742495
pntA_1 (pntA_1) 4855449078
pntA_2 (pntA_2) 4855449078
LIC_RS00245 4993051249
LIC_RS00260 5456355405
LIC_RS00335 7495175472
LIC_RS00340 7547376255
LIC_RS00355 7749777865
LIC_RS00380 8253383378
LIC_RS00385 8338584089
LIC_RS00585 103638104363
LIC_RS00580 104360104992
LIC_RS00575 104989105609
LIC_RS00525 112649113713
LIC_RS00625 129280130236
LIC_RS00655 138992139930
LIC_RS00725 157381158838
BACT000063 (rpmH) 167502167663
LIC_RS00810 170126170836
LIC_RS00815 170829172199
LIC_RS01005 182320183306
LIC_RS16895 197060198031
LIC_RS16830 209154210311
LIC_RS16825 210375211766
LIC_RS16800 214107214499
LIC_RS16785 215697216863
LIC_RS16780 216904218376
icdA_2 (icdA_2) 232970233526
icdA_3 (icdA_3) 232970233524
LIC_RS16570 255841258696
LIC_RS16565 258770261178
LIC_RS16515 267038268375
LIC_RS16505 268757269410
LIC_RS03110 280090280506
lfb1 333925334211
LIC_RS13405 339254340522
LIC_RS13420 344261344671
LIC_RS13425 344723345841
LIC_RS13470 351201352049
LIC_RS15280 389127390356
LIC_RS15275 390382391587
lipL41_2 (lipL41_2) 392638393130
lipL41_3 (lipL41_3) 392639393130
LIC_RS15250 393871394845
LIC_RS03210 406649406873
LIC_RS03215 406880407662
LIC_RS03220 407678408505
LIC_RS03225 408547409071
LIC_RS03230 409071409811
LIC_RS03235 410339410677
LIC_RS16285 416984417841
LIC_RS02350 436319437116
BACT000020 (rpsT) 438769439041
LIC_RS02325 439170440552
LIC_RS02315 442395443441
LIC_RS02310 443458445068
LIC_RS01375 450153450818
LIC_RS01380 450818451876
LIC_RS01395 453931456051
LIC_RS01435 459925460689
LIC_RS16170 468794469342
LIC_RS16175 469356470690
LIC_RS16195 475432476433
LIC_RS16225 485754486725
LIC_RS16230 486722487501
LIC_RS16320 491217492587
LIC_RS16350 496160496447
LIC_RS02740 506652507680
LIC_RS02730 508382510319
LIC_RS02725 510767511882
LIC_RS02720 512183513151
LIC_RS02715 513175513723
LIC_RS09535 570417571289
LIC_RS09545 571755572504
LIC_RS14070 586234586794
LIC_RS14075 586791587324
LIC_RS14080 587326588543
LIC_RS14085 588543589022
LIC_RS14090 589038590372
LIC_RS14095 590369591409
LIC_RS14110 592434594380
LIC_RS14115 594382596079
LIC_RS14120 596076597554
LIC_RS02455 617771619051
LIC_RS02460 619041621704
caiB_1 (caiB_1) 661011661412
LIC_RS15980 696849698186
BACT000042 (rplM) 780209780661
BACT000009 (rpsI) 780672781070
LIC_RS03955 781158783980
LIC_RS03960 783977784468
LIC_RS03980 787489789063
LIC_RS03990 790645791472
LIC_RS03870 800472801017
BACT000040 (rplK) 801050801478
BACT000030 (rplA) 801493802185
BACT000039 (rplJ) 802213802746
BACT000036 (rplL) 802797803177
LIC_RS03900 807106811320
BACT000012 (rpsL) 811408811782
BACT000007 (rpsG) 811800812273
LIC_RS15120 826908828908
LIC_RS15130 829628830089
LIC_RS03700 843691845103
LIC_RS03705 845120847258
LIC_RS15220 847882849435
LIC_RS15215 849698849979
LIC_RS15200 852110852571
LIC_RS15195 852574853467
LIC_RS13265 884850886106
LIC_RS05300 897397897738
LIC_RS05355 910285911448
LIC_RS05360 911483912787
LIC_RS05845 918960919865
LIC_RS05850 919868920677
LIC_RS05855 920679921788
LIC_RS05875 925019926968
LIC_RS05880 927082927720
LIC_RS05885 927717929096
LIC_RS13210 931473932321
LIC_RS13195 934055935635
LIC_RS13190 935857936732
LIC_RS13185 936745937917
LIC_RS12250 945655947496
LIC_RS12210 952928953476
16S_borgpetersenii 978178979682
rrs2_3 (rrs2_3) 978276978725
pfkB_1 (pfkB_1) 985978986409
LIC_RS13980 10145981015398
LIC_RS13975 10153981015925
LIC_RS13970 10164501017736
LIC_RS11825 10542411054591
LIC_RS11815 10554811056146
LIC_RS11805 10567831058348
LIC_RS13025 10788781079996
LIC_RS13020 10800021081321
LIC_RS13015 10813181082064
LIC_RS13010 10820391083049
LIC_RS12995 10842201086148
LIC_RS12990 10861511087089
LIC_RS12980 10883721088968
LIC_RS12945 10925011093337
LIC_RS12935 10941761095246
LIC_RS11785 11373651138543
LIC_RS12680 11420171142835
LIC_RS12675 11429421143898
LIC_RS12665 11464361147674
LIC_RS12660 11476881149091
sucA_1 (sucA_1) 11498311150277
BACT000064 (rpmI) 11592401159443
BACT000049 (rplT) 11594431159796
LIC_RS12560 11619151162412
LIC_RS12555 11624121165606
LIC_RS12550 11656121166679
LIC_RS12545 11666811167043
LIC_RS12540 11670601167845
LIC_RS12530 11683681169459
BACT000001 (rpsA) 11724141174096
LIC_RS12500 11748651175482
BACT000061 (rpmF) 11757561175956
LIC_RS12485 11759621176969
LIC_RS13880 11818721183260
BACT000015 (rpsO) 11872871187553
LIC_RS13855 11875501189640
x_2 11975211198831
LIC_RS11625 12237131224381
LIC_RS11595 12285631229699
LIC_RS11590 12297161231998
LIC_RS06740 12739571274424
LIC_RS06745 12745711275689
LIC_RS12375 12897801290892
LIC_RS12330 12998611301693
LIC_RS12325 13017661304558
LIC_RS12300 13068341308255
LIC_RS06340 13120221312831
LIC_RS06370 13178901318192
LIC_RS06375 13181961318717
LIC_RS06385 13192721320783
LIC_RS06390 13207981321658
LIC_RS06395 13216841323087
LIC_RS06470 13355431337105
LIC_RS06475 13372961338318
LIC_RS06480 13383901339496
LIC_RS06485 13394961340008
LIC_RS06490 13400101341956
mreA_1 (mreA_1) 13427501343184
mreA_2 (mreA_2) 13427501343184
LIC_RS06510 13457661345993
LIC_RS06535 13627871364079
LIC_RS06550 13656941366575
LIC_RS06555 13667211367824
LIC_RS11500 13772881378886
LIC_RS11495 13788881380705
LIC_RS11470 13839961384244
LIC_RS11460 13851221386183
LIC_RS11445 13871531387617
LIC_RS11320 14007611402767
LIC_RS11310 14031271404143
BACT000006 (rpsF) 15290751529350
LIC_RS10785 15293431529792
BACT000018 (rpsR) 15298051530116
BACT000038 (rplI) 15301261530575
LIC_RS10770 15305911531919
LIC_RS10765 15319191533733
LIC_RS10755 15347201537140
LIC_RS10710 15470111548003
LIC_RS10705 15480031549136
tpiA_1 (tpiA_1) 15506501551075
LIC_RS10675 15514431552633
LIC_RS10670 15526371553644
LIC_RS10595 15672391567589
LIC_RS10590 15676011568134
LIC_RS10265 15966301598435
LIC_RS10220 16015321603445
LIC_RS10215 16034641604144
LIC_RS07580 16255171626413
LIC_RS07640 16431901643942
LIC_RS07680 16536811653875
LIC_RS07685 16538821654640
LIC_RS07890 16587691659245
LIC_RS07895 16593471660969
LIC_RS07900 16609661661829
LIC_RS07915 16637961664521
LIC_RS07920 16645181665939
LIC_RS07925 16659431666899
LIC_RS07930 16668801667143
LIC_RS07935 16671571668947
LIC_RS07940 16689541670294
LIC_RS07965 16750101675654
BACT000016 (rpsP) 16758841676150
LIC_RS07985 16768931677561
BACT000048 (rplS) 16775581677968
LIC_RS08040 16849021685807
LIC_RS08045 16858121687608
LIC_RS08050 16876121689285
LIC_RS08055 16892901690516
LIC_RS08060 16905391691015
LIC_RS08090 16956951696222
LIC_RS08145 17068021708070
LIC_RS08150 17080771709204
LIC_RS08175 17129271714477
LIC_RS08180 17144651715034
LIC_RS08190 17159881716530
LIC_RS08210 17199221720752
LIC_RS08220 17210711721949
LIC_RS08225 17219511722994
LIC_RS08230 17230391723728
LIC_RS08265 17295451731302
LIC_RS08270 17313171732291
LIC_RS08280 17327781733548
LIC_RS08300 17366681737273
LIC_RS08305 17372761737725
LIC_RS08345 17468691748914
LIC_RS08405 17613761762542
LIC_RS08445 17673691768019
LIC_RS08460 17696061771141
LIC_RS08465 17711451771771
LIC_RS08470 17720731772516
LIC_RS08500 17752381776383
LIC_RS08760 18102861813192
LIC_RS07865 18208491821400
LIC_RS07855 18217281822579
LIC_RS07825 18354321835794
LIC_RS07805 18413131841825
LIC_RS07795 18423161843362
LIC_RS07780 18435011846248
LIC_RS07775 18462541847906
LIC_RS07760 18511311851439
LIC_RS07745 18519771852513
rrs2_3 (rrs2_3) 18601381860587
LIC_RS08660 18784351879652
LIC_RS08675 18832201884977
LIC_RS08685 18868111887257
BACT000021 (rpsU) 18873151887524
LIC_RS08735 18953731896764
LIC_RS08930 19336201934222
LIC_RS08935 19342191935280
LIC_RS08940 19371571938467
BACT000057 (rpmB) 19488931949177
LIC_RS09020 19546591955879
LIC_RS09025 19558971956973
LIC_RS09030 19569901957397
LIC_RS09065 19630061963182
LIC_RS09070 19635531964617
LIC_RS09090 19677721968752
LIC_RS09105 19704131971060
LIC_RS09130 19756271976844
LIC_RS09135 19769101978619
LIC_RS09145 19798891980881
LIC_RS09150 19809211982342
LIC_RS09175 19856061987096
LIC_RS09200 19908771991794
LIC_RS09205 19917911992564
LIC_RS09215 19929421993169
LIC_RS09225 19934831993731
LIC_RS09230 19937281994759
LIC_RS09245 19980602000291
LIC_RS09250 20002882000614
LIC_RS09280 20055692006570
LIC_RS09290 20072292008626
LIC_RS09305 20110372011624
LIC_RS09350 20190152019281
LIC_RS09365 20213512022376
LIC_RS09380 20240372024912
LIC_RS09385 20249092026321
LIC_RS09400 20273922028339
LIC_RS09405 20283412029273
LIC_RS09415 20313542032652
LIC_RS09420 20327892033619
LIC_RS09450 20382902038907
LIC_RS09460 20398782041407
LIC_RS09465 20414042042183
LIC_RS09470 20421872042951
LIC_RS09475 20429832043732
LIC_RS09590 20476712048522
LIC_RS09600 20491622050424
LIC_RS09605 20504942051732
LIC_RS09675 20639462064920
LIC_RS09685 20663642067374
LIC_RS09785 20869842087766
LIC_RS09790 20877682089294
LIC_RS09905 21154602116857
LIC_RS09920 21180302120744
LIC_RS09925 21208592121611
LIC_RS09940 21229852123542
LIC_RS09945 21235442124566
LIC_RS09955 21249512125544
LIC_RS10065 21361582136730
LIC_RS10090 21406232141753
LIC_RS10095 21417692143928
LIC_RS10100 21439522144266
LIC_RS10315 21796752181651
LIC_RS07095 21831542183435
LIC_RS07080 21850442187029
LIC_RS07075 21870552187855
LIC_RS07060 21894292190730
LIC_RS07055 21907822192899
LIC_RS07045 21944412195220
LIC_RS07040 21952272195490
LIC_RS07035 21954872196275
LIC_RS07025 21971222198183
LIC_RS07020 21984152198750
LIC_RS06950 22157452217010
lipL32_2 (lipL32_2) 22177472218196
lipL32_3 (lipL32_3) 22177472218196
LIC_RS10345 22223002223607
LIC_RS10350 22236892224543
LIC_RS10355 22245592225524
LIC_RS10360 22255212226945
LIC_RS10365 22270352227691
LIC_RS07490 22318252232595
LIC_RS07485 22325922234049
LIC_RS07480 22340462234336
LIC_RS07475 22343642235779
LIC_RS07470 22357812238765
LIC_RS07455 22404022243932
LIC_RS07450 22439292244786
LIC_RS07445 22447922246156
LIC_RS07265 22813352282597
LIC_RS07260 22826142283207
LIC_RS07240 22854362287175
LIC_RS07220 22894632289948
LIC_RS07215 22899452291654
LIC_RS07210 22921042293210
LIC_RS07200 22965602296829
LIC_RS07195 22970482299051
LIC_RS07190 22992122300504
LIC_RS07180 23007392302853
LIC_RS07125 23139132315277
LIC_RS07115 23160062316653
LIC_RS06855 23251112325401
LIC_RS06850 23254152327055
LIC_RS06825 23354402336327
LIC_RS06815 23389152339403
LIC_RS11760 23706982371462
LIC_RS11765 23714592372475
LIC_RS11770 23724802373868
LIC_RS11780 23741872374798
LIC_RS05505 23786112380080
LIC_RS05500 23801342381150
LIC_RS06705 24035482404810
LIC_RS06700 24049062405580
LIC_RS06140 24217462422738
LIC_RS06015 24305762431088
LIC_RS06005 24323202433063
LIC_RS05750 24524722453323
LIC_RS05725 24573862458300
LIC_RS05555 25242772526211
LIC_RS05535 25285952528918
LIC_RS05530 25289972530163
LIC_RS18335 25301852531066
LIC_RS18330 25310662532157
LIC_RS18315 25337732534006
LIC_RS18310 25346392535403
LIC_RS04450 25416492542119
LIC_RS04445 25421612544068
LIC_RS04440 25440972546409
LIC_RS04430 25470922547886
LIC_RS04425 25478832549085
LIC_RS04420 25490882550818
LIC_RS04415 25508232552550
LIC_RS04410 25525442553713
LIC_RS04405 25537202554634
LIC_RS04400 25546272555352
LIC_RS04395 25553542555908
LIC_RS04385 25566422557241
BACT000002 (rpsB) 25572552558115
LIC_RS04375 25581192558379
LIC_RS04370 25584022558779
LIC_RS04365 25587882559009
LIC_RS04360 25590132559387
LIC_RS04350 25604422561263
LIC_RS04345 25612792562088
LIC_RS04340 25620912563014
LIC_RS12770 25693242570097
LIC_RS13170 25964642597813
LIC_RS05230 26241032625905
LIC_RS05225 26259192627943
LIC_RS05180 26315082631843
LIC_RS05185 26319132633037
LIC_RS05190 26330342633516
LIC_RS15540 26633142665839
LIC_RS15535 26691562669842
LIC_RS04540 26745672675790
LIC_RS04530 26764992677050
LIC_RS04525 26770502678423
LIC_RS04520 26784432681508
LIC_RS14300 27028892703647
LIC_RS14305 27036552703987
LIC_RS06115 27061142708096
LIC_RS06110 27082582709652
LIC_RS14425 27322832733200
LIC_RS14430 27331752734200
LIC_RS14485 27402082740648
LIC_RS14490 27407622741529
LIC_RS14520 27468742748163
LIC_RS14530 27496672750599
x_1 27728892774880
LIC_RS14570 27768192777745
LIC_RS13500 27814202782865
BACT000060 (rpmE) 27828862783089
LIC_RS13510 27831462783937
LIC_RS13515 27851712785359
LIC_RS04605 27964642796883
LIC_RS04600 27968862797305
LIC_RS04070 28084222811205
LIC_RS04065 28114222812372
LIC_RS04060 28123962813115
LIC_RS03515 28160692816728
LIC_RS03510 28167252816973
LIC_RS03505 28169492817809
LIC_RS03500 28178062818936
LIC_RS13760 28374412838376
LIC_RS13755 28383732839134
LIC_RS15510 28899232890939
LIC_RS01870 29175082918269
LIC_RS01865 29182822919241
LIC_RS01860 29195792920172
LIC_RS01855 29201782921998
LIC_RS01850 29219952922963
LIC_RS03275 29324722933713
LIC_RS03270 29337192934030
LIC_RS04145 29637152964755
LIC_RS02120 29781242980190
LIC_RS02115 29801832980599
LIC_RS02110 29806002981061
BACT000050 (rplU) 29924452992759
BACT000056 (rpmA) 29930752993329
LIC_RS14230 29956802996930
LIC_RS15925 30028053003557
LIC_RS02520 30593843060109
LIC_RS02515 30602063061549
LIC_RS03035 30779683080733
LIC_RS02365 30829993083778
LIC_RS03820 30940503095141
glmU_1 (glmU_1) 31022163102659
glmU_2 (glmU_2) 31022163102659
LIC_RS02240 31028663103804
LIC_RS02250 31045063105069
LIC_RS02255 31052253107183
LIC_RS04720 31369783137937
BACT000046 (rplQ) 31470213147518
LIC_RS14615 31475203148497
BACT000004 (rpsD) 31485203149143
BACT000011 (rpsK) 31491553149565
BACT000013 (rpsM) 31495683149945
BACT000065 (rpmJ) 31499493150062
adk_2 (adk_2) 31503543150783
adk_3 (adk_3) 31503553150783
secY_3 (secY_3) 31508953151395
BACT000044 (rplO) 31522603152802
BACT000059 (rpmD) 31528193152998
BACT000005 (rpsE) 31530103153516
BACT000047 (rplR) 31535183153886
BACT000035 (rplF) 31538903154429
BACT000008 (rpsH) 31544563154857
BACT000014 (rpsN) 31548773155062
BACT000034 (rplE) 31550823155630
BACT000053 (rplX) 31556343155987
BACT000043 (rplN) 31559873156379
BACT000017 (rpsQ) 31563813156650
BACT000058 (rpmC) 31566603156944
BACT000045 (rplP) 31569413157354
BACT000003 (rpsC) 31573773158054
BACT000051 (rplV) 31580673158399
BACT000019 (rpsS) 31583993158680
BACT000031 (rplB) 31586883159527
LIC_RS14735 31586883159527
BACT000052 (rplW) 31595313159845
BACT000033 (rplD) 31598423160477
BACT000032 (rplC) 31604953161115
BACT000010 (rpsJ) 31611283161436
LIC_RS14760 31614503162655
LIC_RS02770 31774633179352
LIC_RS02780 31808833183309
LIC_RS13135 31880503190062
LIC_RS13145 31914713192748
LIC_RS01495 32484153248699
LIC_RS01500 32487043250104
LIC_RS01610 32613023261694
LIC_RS01605 32617253264625
LIC_RS01555 32817843282215
LIC_RS01550 32822813282742
LIC_RS01545 32827453283128
LIC_RS01635 32850983286294
LIC_RS01645 32870343287471
LIC_RS01660 32896303289824
LIC_RS01680 32935413294515
LIC_RS01690 32956673296803
LIC_RS01745 33055423306858
LIC_RS01760 33080913310634
LIC_RS01210 33117403312414
LIC_RS01205 33124163313789
LIC_RS01160 33217533322652
LIC_RS01150 33231523326682
LIC_RS01095 33376073339211
LIC_RS01090 33392213340222
LIC_RS01070 33424763343345
LIC_RS17180 33535873354315
LIC_RS17185 33543123354962
LIC_RS17210 33577513359316
LIC_RS17225 33604323361820
LIC_RS17230 33618173363952
LIC_RS17340 33889533390203
LIC_RS17345 33902033391120
LIC_RS17350 33911173391854
LIC_RS03010 34095313411429
LIC_RS02035 34208083421143
LIC_RS02030 34212573423200
LIC_RS02025 34232653423435
LIC_RS17115 34536973454110
LIC_RS17110 34541203454602
LIC_RS17070 34605693461498
LIC_RS17065 34615053462233
LIC_RS17045 34659953467392
LIC_RS16980 34724833473748
LIC_RS16975 34737703475080
LIC_RS17405 34789613479971
LIC_RS17410 34799683481011
LIC_RS17415 34810083481997
LIC_RS17420 34820143482976
LIC_RS17445 34873753487611
LIC_RS17510 35174853519449
LIC_RS17735 35514183551672
LIC_RS17740 35516733552125
LIC_RS17745 35523403553608
LIC_RS17750 35536453555555
LIC_RS17790 35623383562667
LIC_RS17860 35717103573239
LIC_RS17865 35732443573591
LIC_RS17870 35735393574177
LIC_RS17875 35741803575754
LIC_RS17880 35757583576600
LIC_RS17890 35787033579956
LIC_RS17895 35799493580758
LIC_RS17900 35808803581899
LIC_RS17905 35819003582247
LIC_RS17930 35836153584490
LIC_RS17935 35844933585254
LIC_RS17965 35919533593860
LIC_RS17970 35940023594925
401552NZ_CP072625.1321405Leptospira borgpetersenii strain FMAS_PN1 chromosome 2, complete sequenceLIC_RS18410 3407535385 EMBL GBK
LIC_RS18435 4128942623
LIC_RS18440 4269644444
LIC_RS18445 4460845519
LIC_RS18490 5419654735
LIC_RS18495 5473255583
LIC_RS18505 5627157497
LIC_RS19065 7510676158
LIC_RS19060 7616678364
BACT000062 (rpmG) 8791688080
LIC_RS18835 100325101740
LIC_RS18710 127601128488
LIC_RS18705 128763130373
LIC_RS18700 130370130852
LIC_RS18695 130845132737
LIC_RS18565 172267172818
LIC_RS19220 197369198211
LIC_RS19290 214477215424
LIC_RS19305 216455217180
LIC_RS19340 219081219359
LIC_RS19375 222911224365
LIC_RS19385 226375227424
LIC_RS19420 235863236873
LIC_RS19435 239221240066
LIC_RS18020 249853250806
LIC_RS18025 250803252128
LIC_RS18040 253717254739
LIC_RS18045 254736256085
LIC_RS18075 260949261866
LIC_RS18080 261859262566
LIC_RS18115 267237268505
LIC_RS18170 277139278128
LIC_RS18185 279827280765
LIC_RS18205 284131285942