Sequence bin for E30

Contig summary statistics

Contigs
3
Total length
4,304,943
Minimum length
45,413
Maximum length
3,985,339
Mean length
1,434,981
N50
3,985,339
L50
1
N90
3,985,339
L90
1
N95
274,191
L95
2

FASTAEMBLGBKGFF3

SequenceSequencing methodOriginal designationLengthCommentsLocusStartEndDirectionAnnotation
399120Illumina + ONT hybridNZ_AP025028.13985339Leptospira kobayashii strain E30 chromosome 1, complete sequenceLIC_RS00025 42906209 EMBL GBK
LIC_RS00030 62298751
LIC_RS00035 87549770
LIC_RS00095 1564916386
LIC_RS00150 2689127736
LIC_RS03010 5254154436
LIC_RS15980 6783869187
LIC_RS17115 7784978262
LIC_RS17110 8043980921
LIC_RS17185 101463102110
LIC_RS17180 102111102845
LIC_RS04600 112082112504
LIC_RS04605 112504112923
LIC_RS16320 119603120937
LIC_RS16785 143612144829
LIC_RS16780 144871146298
LIC_RS01495 152080152361
LIC_RS01500 152376153773
LIC_RS03210 166228166443
LIC_RS03215 166453167235
LIC_RS03220 167245168075
LIC_RS03225 168075168602
LIC_RS03230 168611169351
LIC_RS16895 173915174829
LIC_RS02255 189118191076
LIC_RS02250 191106191669
LIC_RS02240 192338193279
LIC_RS02460 205301207991
LIC_RS02455 207981209261
LIC_RS02515 218305219657
LIC_RS02520 219714220418
LIC_RS16285 229151230020
LIC_RS02035 232402232752
LIC_RS02030 232749234548
LIC_RS02025 234738234899
LIC_RS00815 254953256338
LIC_RS00810 256331257053
BACT000063 (rpmH) 259593259754
LIC_RS16565 269214271610
LIC_RS15280 284114285346
LIC_RS15275 285356286570
LIC_RS15250 289950290936
LIC_RS17405 295104296114
LIC_RS17410 296117297160
LIC_RS17415 297157298146
LIC_RS17420 298133299089
LIC_RS17445 306167306397
LIC_RS06510 318073318300
mreA_1 (mreA_1) 362687363121
mreA_2 (mreA_2) 362687363121
LIC_RS06490 363938365875
LIC_RS06485 365872366387
LIC_RS06480 366384367547
LIC_RS06475 398248399270
LIC_RS15925 412286413032
LIC_RS11320 452535454517
LIC_RS11310 454872455948
LIC_RS06950 530503531669
LIC_RS01150 563744567244
LIC_RS01160 570417571361
LIC_RS06015 580239580748
LIC_RS06005 581938582678
LIC_RS00625 603093604106
LIC_RS00655 611123612070
icdA_2 (icdA_2) 616770617326
icdA_3 (icdA_3) 616770617324
LIC_RS09925 641852642541
LIC_RS09920 642552645311
LIC_RS15220 667443668984
LIC_RS15215 669060669338
LIC_RS15200 671443671904
LIC_RS15195 671914672819
LIC_RS16505 722217722855
LIC_RS16515 723159724508
LIC_RS02365 733579734358
LIC_RS03035 735178737952
LIC_RS17210 739762741315
LIC_RS17225 742193743617
LIC_RS17230 743621745753
LIC_RS04360 873291873701
LIC_RS04365 873698873922
LIC_RS04370 873933874301
BACT000002 (rpsB) 888449889324
LIC_RS04385 889324889920
LIC_RS04395 890649891197
LIC_RS04400 891221891934
LIC_RS04405 891931892842
LIC_RS04410 892860894017
LIC_RS04415 894014895723
LIC_RS04420 895750897495
LIC_RS04425 897890899080
LIC_RS04430 899077899877
LIC_RS04440 910127912451
LIC_RS04445 912459914342
LIC_RS04450 914405914896
LIC_RS15535 916973917659
LIC_RS15540 918224920671
BACT000001 (rpsA) 929295930995
LIC_RS12500 931757932371
BACT000061 (rpmF) 932441932641
LIC_RS12485 932647933669
LIC_RS18310 933724934485
LIC_RS18315 938516938749
LIC_RS18330 940005941105
LIC_RS18335 941092941997
LIC_RS01205 944794946146
LIC_RS01210 946139946837
LIC_RS01760 947710950256
LIC_RS01745 951458952753
LIC_RS07020 975997976317
LIC_RS07025 976411977484
LIC_RS07035 978236979057
LIC_RS07040 979054979317
LIC_RS07045 979319980101
LIC_RS07055 981233983347
LIC_RS09135 984546986243
LIC_RS09130 986255987472
LIC_RS13760 10614391062380
LIC_RS13755 10623771063138
LIC_RS08940 11369751138264
LIC_RS08935 11393171140372
LIC_RS08930 11403691140974
LIC_RS12680 11441601144987
LIC_RS12675 11450461146005
LIC_RS09150 11498931151320
LIC_RS09145 11513331152325
BACT000057 (rpmB) 11553371155633
LIC_RS14570 11594481160389
LIC_RS13500 11650501166456
BACT000060 (rpmE) 11664711166671
LIC_RS13510 11667251167525
LIC_RS14520 11753441176633
LIC_RS14490 11802791181049
LIC_RS14485 11811201181560
sucA_1 (sucA_1) 11891371189583
LIC_RS12660 11903521191758
LIC_RS12665 11917671193005
16S_kobayashii 11945541196049
rrs2_3 (rrs2_3) 11946511195090
LIC_RS01850 12356421236610
LIC_RS01855 12366301238600
LIC_RS01860 12386041239194
LIC_RS01865 12392131240172
LIC_RS01870 12401831240944
LIC_RS09105 12521981252782
LIC_RS09090 12544091255389
LIC_RS01375 12599931260637
LIC_RS01380 12606371261692
LIC_RS01395 12642411266358
LIC_RS01435 12705531271326
LIC_RS18045 12790881280437
LIC_RS18040 12804241281482
LIC_RS18025 12814791282768
LIC_RS18020 12827651283715
LIC_RS17340 12965491297781
LIC_RS17345 12977811298689
LIC_RS17350 12986951299426
LIC_RS12935 12995341300598
LIC_RS12945 13014141302241
LIC_RS06110 13067421308136
LIC_RS06115 13116781313669
LIC_RS14305 13177741318106
rrs2_3 (rrs2_3) 13264471326886
LIC_RS09790 13925801394106
LIC_RS09785 13941201394902
LIC_RS08175 14171931418722
LIC_RS08180 14187301419296
LIC_RS14070 14275021428062
LIC_RS14075 14280591428580
LIC_RS14080 14285921429812
LIC_RS14085 14298121430300
LIC_RS14090 14303021431597
LIC_RS14095 14316161432686
LIC_RS14110 14336161435547
LIC_RS14115 14355541437287
LIC_RS14120 14372891438731
LIC_RS11785 14476601448841
LIC_RS11780 14505431451151
LIC_RS11770 14514881452864
LIC_RS11765 14528731453913
LIC_RS11760 14539101454665
LIC_RS09175 14557051457201
LIC_RS05530 14586031459769
LIC_RS05535 14598531460179
LIC_RS05555 14624121464364
LIC_RS11625 14672531467954
LIC_RS11595 14712111472317
LIC_RS11590 14723341474586
LIC_RS03980 14796731481226
LIC_RS03990 14826411483486
LIC_RS04520 15225631525706
LIC_RS04525 15257221527095
LIC_RS04530 15270971527660
LIC_RS04540 15282661529516
LIC_RS13470 15363381537189
LIC_RS05500 15425721543504
LIC_RS05505 15436441545155
BACT000042 (rplM) 15476161548068
BACT000009 (rpsI) 15480721548467
LIC_RS03955 15497881552550
LIC_RS03960 15525541553051
LIC_RS13025 15575321558629
LIC_RS13020 15586311559977
LIC_RS13015 15599771560723
LIC_RS13010 15607041561750
LIC_RS12995 15627601564694
LIC_RS12990 15646871565628
LIC_RS12980 15671751567786
LIC_RS12375 15709531572059
LIC_RS12330 15782201580079
LIC_RS12325 15801541582931
LIC_RS12300 15835451585005
LIC_RS13425 16018731602997
LIC_RS13420 16030171603421
LIC_RS13405 16071961608461
LIC_RS08405 16382321639413
LIC_RS08445 16438461644490
LIC_RS08460 16460201647561
LIC_RS08465 16475581648199
LIC_RS08470 16482761648722
LIC_RS08500 16638891665052
LIC_RS11825 16794191679766
LIC_RS11815 16806771681348
LIC_RS11805 16819481683492
LIC_RS13880 17770391778421
BACT000015 (rpsO) 17860731786339
LIC_RS13855 17863451788435
LIC_RS06815 17938811794369
LIC_RS06825 17967201797607
LIC_RS07855 18941481894996
LIC_RS07865 18952271895787
LIC_RS09475 19000701900843
LIC_RS09470 19008781901666
LIC_RS09465 19016751902451
LIC_RS09460 19024481903860
LIC_RS08145 19066091907892
LIC_RS08150 19078851909006
LIC_RS09250 19145511914886
LIC_RS09245 19148861917150
LIC_RS08760 19339601936899
LIC_RS08735 19406261942029
LIC_RS07445 19507621952057
LIC_RS07450 19520541952905
LIC_RS07455 19529151956367
LIC_RS13170 19651291966508
LIC_RS06700 19860551986729
LIC_RS06705 19867831988003
LIC_RS06740 19922981992768
LIC_RS06745 19928461993949
LIC_RS14230 20055012006760
BACT000056 (rpmA) 20087262008983
BACT000050 (rplU) 20093192009627
LIC_RS09545 20230872023833
LIC_RS12210 20388012039370
LIC_RS12250 20400832042047
LIC_RS07470 20579432060909
LIC_RS07475 20609092062315
LIC_RS07480 20623282062612
LIC_RS07485 20626092064081
LIC_RS07490 20640832064850
LIC_RS10360 20684482069902
LIC_RS10355 20699082070876
LIC_RS10350 20708782071735
LIC_RS10345 20717912073092
LIC_RS10315 20747862076786
LIC_RS09940 20828012083349
LIC_RS09945 20861312087150
LIC_RS09955 20871432087751
LIC_RS10265 20896422091447
LIC_RS10220 20947912096716
LIC_RS10215 20967352097424
LIC_RS08090 21072142107738
LIC_RS08060 21121912112664
LIC_RS08055 21126842113910
LIC_RS08050 21139182115594
LIC_RS08045 21155912117390
LIC_RS08040 21173682118282
BACT000048 (rplS) 21247592125205
LIC_RS07985 21252142125867
BACT000016 (rpsP) 21266322126889
LIC_RS07965 21269502127597
LIC_RS07940 21324072133765
LIC_RS07935 21337702135590
LIC_RS07930 21355772135855
LIC_RS07925 21358302136792
LIC_RS07920 21367962138217
LIC_RS07915 21382222138929
LIC_RS07900 21409192141767
LIC_RS07895 21417692143391
LIC_RS07890 21434572143945
LIC_RS08345 21463952148329
LIC_RS08305 21570372157468
LIC_RS08300 21574752158095
LIC_RS09280 21639942164995
LIC_RS09290 21660282167422
LIC_RS09305 21705942171181
LIC_RS09365 21821832183208
LIC_RS09385 21857262187162
LIC_RS09400 21882682189194
LIC_RS09405 21891972190129
LIC_RS09415 21927042193954
LIC_RS09420 21940742194904
LIC_RS09450 22003602200986
LIC_RS07825 22117812212146
LIC_RS07805 22175702218049
LIC_RS07780 22196392222395
LIC_RS07775 22223992224051
LIC_RS07760 22271902227501
LIC_RS07745 22277722228311
LIC_RS08660 22333262234552
LIC_RS08675 22374212239193
LIC_RS08685 22410442241499
BACT000021 (rpsU) 22415212241739
LIC_RS09675 22465452247519
LIC_RS09685 22492752250294
LIC_RS09200 22674382268370
LIC_RS09205 22683702269140
LIC_RS09225 22706282270870
LIC_RS09230 22708672271871
LIC_RS03275 22759712277215
LIC_RS03270 22772252277536
LIC_RS03515 22822642282920
LIC_RS03510 22829172283165
LIC_RS03505 22831412284016
LIC_RS03500 22840012285140
LIC_RS13145 22952372296511
LIC_RS13135 22976702299685
BACT000046 (rplQ) 23016422302160
LIC_RS14615 23021622303139
BACT000004 (rpsD) 23031712303803
BACT000011 (rpsK) 23038242304237
BACT000013 (rpsM) 23042492304629
BACT000065 (rpmJ) 23046362304749
secY_3 (secY_3) 23055862306086
BACT000044 (rplO) 23069362307475
BACT000059 (rpmD) 23074812307660
BACT000005 (rpsE) 23076742308180
BACT000047 (rplR) 23081822308550
BACT000035 (rplF) 23085602309099
BACT000008 (rpsH) 23091242309522
BACT000014 (rpsN) 23095452309730
BACT000034 (rplE) 23097412310292
BACT000053 (rplX) 23102952310678
BACT000043 (rplN) 23106802311072
BACT000017 (rpsQ) 23110692311338
BACT000058 (rpmC) 23113422311614
BACT000045 (rplP) 23116112312024
BACT000003 (rpsC) 23120472312724
BACT000051 (rplV) 23127282313078
BACT000019 (rpsS) 23130872313365
LIC_RS14735 23133792314215
BACT000031 (rplB) 23133792314215
BACT000052 (rplW) 23142182314523
BACT000033 (rplD) 23145282315166
BACT000032 (rplC) 23151752315798
BACT000010 (rpsJ) 23158112316119
LIC_RS14760 23161252317330
BACT000007 (rpsG) 23193352319808
BACT000012 (rpsL) 23198252320199
LIC_RS03900 23203162324617
BACT000036 (rplL) 23284532328833
BACT000039 (rplJ) 23288782329408
BACT000030 (rplA) 23294202330112
BACT000040 (rplK) 23301322330560
LIC_RS03870 23305932331192
LIC_RS08280 23327402333507
LIC_RS08270 23339782334952
LIC_RS08265 23439052345677
LIC_RS13185 24578732459042
LIC_RS13190 24590522459942
LIC_RS13195 24599792461523
LIC_RS13210 24633392464196
LIC_RS10670 25125212513528
LIC_RS10675 25135302514717
LIC_RS10705 25164562517616
LIC_RS10710 25176132518608
LIC_RS10755 25241992526571
LIC_RS10765 25275902529395
LIC_RS10770 25294092530749
BACT000038 (rplI) 25307682531214
BACT000018 (rpsR) 25312242531559
LIC_RS10785 25315702532010
BACT000006 (rpsF) 25320032532278
LIC_RS09590 25490022549895
LIC_RS09600 25505262551767
LIC_RS09605 25518202553046
x_1 25746552576688
LIC_RS03820 25774902578614
LIC_RS02120 25809592583079
LIC_RS02115 25830912583513
LIC_RS02110 25835102583983
LIC_RS10590 26423982642934
LIC_RS10595 26429312643287
LIC_RS10100 26545392654850
LIC_RS10095 26548692657022
LIC_RS10090 26570722658202
LIC_RS10065 26666472667222
LIC_RS09020 26749582676166
LIC_RS09025 26761692677245
LIC_RS09030 26772672677677
LIC_RS05230 26811272682953
LIC_RS05225 26843792686439
LIC_RS05180 26888882689223
LIC_RS05185 26893172690432
LIC_RS05190 26904322690899
LIC_RS04070 26934272696192
LIC_RS04065 26963832697363
LIC_RS04060 26973762698089
LIC_RS06855 27072702707557
LIC_RS06850 27075812709224
LIC_RS08230 27122612712956
LIC_RS08225 27130072714059
LIC_RS08220 27140932714968
LIC_RS08210 27152922716128
LIC_RS08190 27194612719994
LIC_RS07580 27208812721789
LIC_RS07220 27253552725843
LIC_RS07215 27258402727582
LIC_RS07210 27276562728762
LIC_RS01645 27355332735973
LIC_RS01660 27380302738221
LIC_RS01680 27417792742747
LIC_RS01690 27427552743978
LIC_RS12530 27762932777381
LIC_RS12540 27780802778826
LIC_RS12545 27788322779194
LIC_RS12550 27791962780272
LIC_RS12555 27802722783481
LIC_RS12560 27834972784000
BACT000049 (rplT) 27856892786042
BACT000064 (rpmI) 27860462786246
LIC_RS06140 28333222834311
LIC_RS07265 29068762908156
LIC_RS07260 29081712908770
LIC_RS07240 29177842919550
LIC_RS07125 29249542926318
LIC_RS07115 29301502930806
LIC_RS07095 29313512931632
LIC_RS07080 29329432934934
LIC_RS07075 29349442935744
LIC_RS07060 29372942938643
x_2 29531532954457
LIC_RS12770 29650692965839
LIC_RS05360 29811372982438
LIC_RS05355 29824512983578
LIC_RS05300 29970082997349
LIC_RS07200 30303763030669
LIC_RS07195 30306873032696
LIC_RS07190 30328123034116
LIC_RS07180 30343983036467
LIC_RS00585 30387613039495
LIC_RS00580 30394973040126
LIC_RS00575 30401233040704
LIC_RS13980 30472613048061
LIC_RS13975 30480633048593
LIC_RS13970 30486873049976
LIC_RS02770 30775503079439
LIC_RS02780 30808533083318
LIC_RS15120 30857223087716
LIC_RS15130 30884483088921
LIC_RS09065 31010483101227
LIC_RS09070 31028913103949
LIC_RS06395 31242813125687
LIC_RS06390 31257093126581
LIC_RS06385 31265933128107
LIC_RS06375 31286633129187
LIC_RS06370 31291903129480
LIC_RS06340 31373943138185
LIC_RS05885 31641953165568
LIC_RS05880 31655683166206
LIC_RS05875 31662613168153
LIC_RS05855 31721153173227
LIC_RS05850 31732403174067
LIC_RS05845 31740673174972
LIC_RS01555 31911673191598
LIC_RS01550 31916243192085
LIC_RS01545 31965663196952
LIC_RS04350 32068743207695
LIC_RS04345 32076983208501
LIC_RS04340 32084943209378
LIC_RS16170 32223333222866
LIC_RS16175 32228693224245
LIC_RS01095 32540933255709
LIC_RS01090 32557203256685
LIC_RS01070 32587273259581
LIC_RS03235 32646643265014
LIC_RS07640 32773473278108
LIC_RS07680 32883393288542
LIC_RS07685 32885843289303
LIC_RS04720 33101133311066
LIC_RS16975 33403303341640
LIC_RS16980 33416553342923
LIC_RS00385 33534913354213
LIC_RS00380 33542353355137
LIC_RS03705 33606293362707
LIC_RS03700 33627183364136
LIC_RS09905 33673473368774
LIC_RS06555 33993443400462
LIC_RS06550 34006033401484
LIC_RS14425 34266903427598
LIC_RS14430 34275793428604
LIC_RS02310 34308633432464
LIC_RS02315 34333853434425
LIC_RS02325 34362523437628
BACT000020 (rpsT) 34379543438232
LIC_RS02350 34396373440434
LIC_RS17045 34430343444428
LIC_RS17065 34479873448718
LIC_RS17070 34487153449644
pfkB_1 (pfkB_1) 34518543452285
LIC_RS11445 34670493467528
LIC_RS11460 34684523469522
LIC_RS11470 34695883469839
LIC_RS11495 34732193475087
LIC_RS11500 34750843476685
LIC_RS16230 36196353620441
LIC_RS16195 36251393626143
LIC_RS01005 36515763652514
LIC_RS03110 36781403678559
LIC_RS01610 36910703691462
LIC_RS01605 36914793694391
LIC_RS05725 37121513713038
LIC_RS05750 37169613717809
LIC_RS17735 37250533725292
LIC_RS17740 37252963725757
LIC_RS17745 37257713727039
LIC_RS17750 37270413728954
LIC_RS16800 37338283734208
LIC_RS16825 37362253737640
LIC_RS16830 37376923738846
pntA_1 (pntA_1) 37446673745191
pntA_2 (pntA_2) 37446673745191
LIC_RS00245 37483803749690
LIC_RS00260 37529673753776
LIC_RS00335 37607583761282
LIC_RS00340 37612863762059
LIC_RS00355 37643553764708
LIC_RS00525 37911873792248
LIC_RS16350 38326473832934
LIC_RS04145 38357593836802
LIC_RS17790 38406443840979
LIC_RS15510 38747723875794
LIC_RS02715 38880583888621
LIC_RS02720 38886213889583
LIC_RS02725 38896083890726
LIC_RS02730 38907453892676
LIC_RS02740 38933153894346
LIC_RS00725 39110193912467
LIC_RS00205 39155073916475
LIC_RS16570 39451043947947
LIC_RS17510 39557743957741
LIC_RS17860 39654883966969
LIC_RS17865 39669883967359
LIC_RS17875 39679573969495
LIC_RS17890 39717053972961
LIC_RS17895 39729543973760
LIC_RS17900 39738653974860
LIC_RS17905 39748603975207
LIC_RS17930 39774413978334
LIC_RS17935 39783393979100
LIC_RS17965 39813853983259
LIC_RS17970 39834153984338
399119Illumina + ONT hybridNZ_AP025029.1274191Leptospira kobayashii strain E30 chromosome 2, complete sequenceLIC_RS19290 1113612104 EMBL GBK
LIC_RS19305 1329314018
LIC_RS19340 1402114305
LIC_RS18835 4039241888
LIC_RS19375 5174053173
LIC_RS19385 5516456216
LIC_RS19420 6152962530
LIC_RS19435 6480265626
LIC_RS18205 7473776572
LIC_RS18185 7984380796
LIC_RS18170 8248383463
LIC_RS18115 8701488270
LIC_RS18075 9067191597
LIC_RS18080 9158192282
LIC_RS18490 131227131754
LIC_RS18495 131758132612
LIC_RS18505 133184134407
LIC_RS19065 158420159526
LIC_RS19060 159507161642
LIC_RS19220 176797177642
LIC_RS18710 200926201816
LIC_RS18705 201913203523
LIC_RS18695 203993205933
BACT000062 (rpmG) 235671235832
LIC_RS18445 240966241838
LIC_RS18440 241852243597
LIC_RS18435 244207245514
LIC_RS18410 250876252195
399118 Illumina + ONT hybrid NZ_AP025030.1 45413 Leptospira kobayashii strain E30 plasmid pE30-1, complete sequence