Sequence bin for BUT 6

Contig summary statistics

Contigs
13
Total length
4,287,324
Minimum length
1,192
Maximum length
1,844,499
Mean length
329,795
N50
579,278
L50
2
N90
175,453
L90
7
N95
154,273
L95
8

FASTAEMBLGBKGFF3

SequenceSequencing methodOriginal designationLengthCommentsLocusStartEndDirectionAnnotation
398905otherNZ_AKWZ02000010.11844499Leptospira fainei serovar Hurstbridge str. BUT 6 ctg1134728687817, whole genome shotgun sequenceLIC_RS06510 2010220329 EMBL GBK
mreA_2 (mreA_2) 2167222106
mreA_1 (mreA_1) 2167322106
LIC_RS06490 2291524861
LIC_RS06485 2486225365
LIC_RS06480 2536226486
LIC_RS06475 2656227584
LIC_RS06470 2777729330
sucA_1 (sucA_1) 3175432200
LIC_RS12660 3295434357
LIC_RS12665 3437135618
LIC_RS12675 3836739350
LIC_RS12680 3942240261
LIC_RS14300 5703357782
LIC_RS14305 5778758125
LIC_RS06115 5958661568
LIC_RS06110 6183563229
LIC_RS14425 7468175616
LIC_RS14430 7559476625
BACT000050 (rplU) 121355121666
BACT000056 (rpmA) 121987122244
LIC_RS14230 124248125510
caiB_1 (caiB_1) 141368141769
LIC_RS13420 245469245879
LIC_RS13425 245981247102
LIC_RS13470 251171252004
LIC_RS03820 254324255418
LIC_RS03275 259773261014
LIC_RS03270 261050261364
LIC_RS03515 265946266605
LIC_RS03510 266602266850
LIC_RS03505 266826267698
LIC_RS03500 267695268846
LIC_RS13145 276589277863
LIC_RS13135 279140281152
BACT000046 (rplQ) 296687297256
LIC_RS14615 297258298235
BACT000004 (rpsD) 298258298881
BACT000011 (rpsK) 298894299301
BACT000013 (rpsM) 299304299681
BACT000065 (rpmJ) 299684299797
adk_2 (adk_2) 300090300519
adk_3 (adk_3) 300091300519
secY_3 (secY_3) 300628301128
BACT000044 (rplO) 302108302629
BACT000059 (rpmD) 302649302828
BACT000005 (rpsE) 302834303349
BACT000047 (rplR) 303353303721
BACT000035 (rplF) 303726304265
BACT000008 (rpsH) 304290304688
BACT000014 (rpsN) 304708304893
BACT000034 (rplE) 304908305456
BACT000053 (rplX) 305460305813
BACT000043 (rplN) 305813306205
BACT000017 (rpsQ) 306207306476
BACT000058 (rpmC) 306479306781
BACT000045 (rplP) 306778307191
BACT000003 (rpsC) 307224307901
BACT000051 (rplV) 307914308246
BACT000019 (rpsS) 308246308524
LIC_RS14735 308530309369
BACT000031 (rplB) 308530309369
BACT000052 (rplW) 309373309681
BACT000033 (rplD) 309681310316
BACT000032 (rplC) 310332310952
BACT000010 (rpsJ) 310964311272
LIC_RS14760 311283312488
BACT000007 (rpsG) 335955336428
BACT000012 (rpsL) 336442336816
LIC_RS03900 336892341097
BACT000036 (rplL) 344925345308
BACT000039 (rplJ) 345354345887
BACT000030 (rplA) 345914346606
BACT000040 (rplK) 346611347039
LIC_RS03870 347080347625
LIC_RS15120 360977362956
LIC_RS15130 364133364594
LIC_RS15195 373666374568
LIC_RS15200 374580375035
LIC_RS15215 377069377350
LIC_RS15220 377435378985
LIC_RS03705 404869406998
LIC_RS03700 407002408423
lipL41_2 (lipL41_2) 431282431774
lipL41_3 (lipL41_3) 431283431774
LIC_RS15250 432085433056
LIC_RS01435 529140529910
LIC_RS01395 533516535636
LIC_RS01380 537691538749
LIC_RS01375 538749539390
LIC_RS02310 542479544086
LIC_RS02315 544107545150
LIC_RS02325 546988548379
BACT000020 (rpsT) 548506548778
LIC_RS02350 550420551214
LIC_RS02255 578493580460
LIC_RS02250 580711581274
LIC_RS02240 581966582901
LIC_RS02365 597913598692
LIC_RS01870 606546607307
LIC_RS01865 607319608278
LIC_RS01860 608311608901
LIC_RS01855 608905610746
LIC_RS01850 610743611720
LIC_RS16350 628332628619
LIC_RS16320 642368643696
LIC_RS02515 664681666033
LIC_RS02520 666133666870
LIC_RS02715 676827677381
LIC_RS02720 677391678350
LIC_RS02725 678378679496
LIC_RS02730 679504681432
LIC_RS02740 682163683191
LIC_RS16170 706792707328
LIC_RS16175 707365708693
LIC_RS16195 713634714632
LIC_RS16225 722388723359
LIC_RS16230 723356724135
LIC_RS16285 727342728196
LIC_RS01610 757320757712
LIC_RS01605 757721760612
LIC_RS16505 763105763758
LIC_RS16515 764144765493
LIC_RS16565 774160776565
LIC_RS16570 776691779534
icdA_2 (icdA_2) 796941797497
icdA_3 (icdA_3) 796943797497
LIC_RS16780 821582823048
LIC_RS16785 823089824258
LIC_RS16800 825307825702
LIC_RS16825 828064829455
LIC_RS16830 829554830705
LIC_RS16895 846260847237
LIC_RS01005 859303860241
LIC_RS00815 866204867580
LIC_RS00810 867588868298
BACT000063 (rpmH) 870738870899
LIC_RS00525 896801897865
LIC_RS17790 927847928176
LIC_RS17750 932888934798
LIC_RS17745 934831936099
LIC_RS17740 936204936653
LIC_RS17735 936654936914
LIC_RS17510 950887952854
LIC_RS00385 970682971392
LIC_RS00380 971389972237
LIC_RS00355 977252977623
LIC_RS00340 978842979615
LIC_RS00335 979690980220
LIC_RS00260 997038997910
LIC_RS00245 10012391002558
pntA_1 (pntA_1) 10034301003954
pntA_2 (pntA_2) 10034301003954
LIC_RS00205 10103881011356
LIC_RS00160 10210931023072
LIC_RS00150 10240411024886
LIC_RS00095 10335231034266
LIC_RS00035 10419871042946
LIC_RS00030 10429431045456
LIC_RS00025 10454871047400
LIC_RS17970 10531091054032
LIC_RS17965 10541231056033
LIC_RS17935 10604151061176
LIC_RS17930 10611801062055
LIC_RS17905 10629761063323
LIC_RS17900 10633231064318
LIC_RS17895 10644381065244
LIC_RS17890 10652371066490
LIC_RS17880 10695801070434
LIC_RS17875 10704381072009
LIC_RS17870 10720181072611
LIC_RS17865 10726041072951
LIC_RS17860 10729651074437
LIC_RS00575 10834621084043
LIC_RS00580 10840401084672
LIC_RS00585 10846691085400
LIC_RS00625 10921531093121
LIC_RS00655 11016861102624
LIC_RS00725 11179501119437
LIC_RS17445 11429371143170
LIC_RS17420 11492611150226
LIC_RS17415 11502231151218
LIC_RS17410 11512151152252
LIC_RS17405 11522491153271
LIC_RS17350 11590221159789
LIC_RS17345 11597861160694
LIC_RS17340 11606941161938
LIC_RS17230 11843301186474
LIC_RS17225 11864711187856
LIC_RS17210 11890161190578
LIC_RS17185 11933091193968
LIC_RS17180 11939651194696
LIC_RS17115 12121941212607
LIC_RS17110 12126171213099
LIC_RS17070 12175521218484
LIC_RS17065 12184971219225
LIC_RS17045 12228661224266
LIC_RS16980 12376001238865
LIC_RS16975 12388841240194
LIC_RS01070 12468951247761
LIC_RS01090 12501791251201
LIC_RS01095 12512131252814
LIC_RS01160 12631221264027
LIC_RS01205 12796851281067
LIC_RS01210 12810691281761
LIC_RS01760 12827311285271
LIC_RS01745 12865841287900
LIC_RS01690 12903031291454
LIC_RS01680 12914631292464
LIC_RS01660 12963761296579
LIC_RS01645 12988611299295
LIC_RS01635 12999651301056
LIC_RS01545 13031811303561
LIC_RS01550 13035851304046
LIC_RS01555 13040881304519
LIC_RS01500 13072281308637
LIC_RS01495 13086481308929
LIC_RS02025 13266621326829
LIC_RS02035 13288771329212
LIC_RS03010 13693131371199
LIC_RS03110 13936361394052
LIC_RS03035 14372221439963
LIC_RS02770 14503311452214
LIC_RS02780 14536651456088
LIC_RS15510 14777251478744
LIC_RS15925 15142231514975
LIC_RS15275 15269831528188
LIC_RS15280 15282361529462
LIC_RS03210 15323101532534
LIC_RS03215 15325411533323
LIC_RS03220 15333571534184
LIC_RS03225 15342081534732
LIC_RS03230 15347321535472
LIC_RS03235 15355301535868
LIC_RS02455 15812701582541
LIC_RS02460 15827111585359
LIC_RS04720 16317291632688
LIC_RS13755 17196551720416
LIC_RS13760 17204131721345
LIC_RS13265 17517631752905
LIC_RS13210 17599151760769
LIC_RS13195 17625071764093
LIC_RS13190 17641301765014
LIC_RS13185 17650391766211
LIC_RS14570 17761601777086
LIC_RS13500 17822531783662
BACT000060 (rpmE) 17836871783887
LIC_RS13510 17839511784748
LIC_RS13515 17847321784923
x_1 17887741790771
LIC_RS14530 18003091801175
LIC_RS14520 18025511803840
LIC_RS14490 18077201808493
LIC_RS14485 18086641809104
398901otherNZ_AKWZ02000002.1579278Leptospira fainei serovar Hurstbridge str. BUT 6 ctg1134728687809, whole genome shotgun sequenceBACT000021 (rpsU) 6542865637 EMBL GBK
LIC_RS08685 6567966128
LIC_RS08675 6793869710
LIC_RS08660 7152772744
LIC_RS07745 7769678232
LIC_RS07760 7912579430
LIC_RS07775 8278984441
LIC_RS07780 8444887192
LIC_RS07825 9419994561
LIC_RS07855 113139113990
LIC_RS07865 114303114860
LIC_RS07890 119137119625
LIC_RS07895 119749121368
LIC_RS07900 121365122219
LIC_RS07915 124218124943
LIC_RS07920 124940126370
LIC_RS07925 126375127337
LIC_RS07930 127312127578
LIC_RS07935 127575129368
LIC_RS07940 129375130718
LIC_RS07965 135438136088
BACT000016 (rpsP) 136252136518
LIC_RS07985 137249137917
BACT000048 (rplS) 137914138342
LIC_RS08040 145092145994
LIC_RS08045 145972147792
LIC_RS08050 147797149470
LIC_RS08055 149481150707
LIC_RS08060 150736151203
LIC_RS08090 155776156300
LIC_RS08145 163511164818
LIC_RS08150 164822165937
LIC_RS08175 169130170680
LIC_RS08180 170668171237
LIC_RS08190 172251172814
LIC_RS08210 174363175196
LIC_RS08220 175523176404
LIC_RS08225 176406177452
LIC_RS08230 177493178182
16S_fainei 197298198802
rrs2_3 (rrs2_3) 197396197845
LIC_RS08500 230389231576
LIC_RS08470 234404234853
LIC_RS08465 234941235567
LIC_RS08460 235569237110
LIC_RS08445 238632239276
LIC_RS08405 245439246614
LIC_RS08345 256497258536
LIC_RS08305 267526267981
LIC_RS08300 267984268589
LIC_RS08280 271552272322
LIC_RS08270 273028274005
LIC_RS08265 274010275767
LIC_RS07685 281114281833
LIC_RS07680 281876282067
LIC_RS07640 291660292418
LIC_RS07580 308105309049
LIC_RS09785 323019323810
LIC_RS09790 323853325379
LIC_RS09905 350239351648
LIC_RS09920 352758355481
LIC_RS09925 355569356264
LIC_RS10065 364226364801
LIC_RS10090 368820369950
LIC_RS10095 369967372117
LIC_RS10100 372153372467
LIC_RS07265 375495376766
LIC_RS07260 376786377382
LIC_RS07240 385693387495
LIC_RS07220 391072391551
LIC_RS07215 391548393257
LIC_RS07210 393618394742
LIC_RS07200 398516398788
LIC_RS07195 398842400845
LIC_RS07190 401049402350
LIC_RS07180 402586404733
LIC_RS07125 414037415401
LIC_RS07115 416134416775
LIC_RS07095 418934419215
LIC_RS07080 420875422860
LIC_RS07075 423009423809
LIC_RS07060 425491426768
LIC_RS07055 426808428925
LIC_RS07045 430130430912
LIC_RS07040 430922431185
LIC_RS07035 431182432024
LIC_RS07025 432818433888
LIC_RS07020 434270434599
LIC_RS06950 450919452079
lipL32_3 (lipL32_3) 453004453453
lipL32_2 (lipL32_2) 453004453453
LIC_RS06855 462051462338
LIC_RS06850 462359463999
LIC_RS10590 473488474021
LIC_RS10595 474036474392
LIC_RS10670 486888487961
LIC_RS10675 487965489155
tpiA_1 (tpiA_1) 489329489754
LIC_RS10705 491227492339
LIC_RS10710 492342493334
LIC_RS10755 498960501368
LIC_RS10765 502347504206
LIC_RS10770 504228505550
BACT000038 (rplI) 505561506025
BACT000018 (rpsR) 506037506357
LIC_RS10785 506373506813
BACT000006 (rpsF) 506806507081
LIC_RS11310 550960551985
LIC_RS11320 552378554375
LIC_RS11590 558433560700
LIC_RS11595 560697561854
LIC_RS11625 565523566188
LIC_RS05555 569677571575
LIC_RS05535 573918574241
LIC_RS05530 574324575493
398910otherNZ_AKWZ02000003.1455698Leptospira fainei serovar Hurstbridge str. BUT 6 ctg1134728687816, whole genome shotgun sequenceLIC_RS07445 218747220027 EMBL GBK
LIC_RS07450 220037220888
LIC_RS07455 220899224339
LIC_RS07470 225996228932
LIC_RS07475 228936230351
LIC_RS07480 230377230667
LIC_RS07485 230664232127
LIC_RS07490 232124232891
LIC_RS10360 234938236350
LIC_RS10355 236347237312
LIC_RS10350 237329238183
LIC_RS10345 238264239571
LIC_RS10315 241306243306
LIC_RS09940 253240253785
LIC_RS09945 253857254858
LIC_RS09955 255247255852
LIC_RS10265 260361262166
LIC_RS10220 263953265869
LIC_RS10215 265874266563
LIC_RS09685 278573279589
LIC_RS09675 280974281948
LIC_RS09605 286375287613
LIC_RS09600 287680288942
LIC_RS09590 289563290420
LIC_RS09475 292430293179
LIC_RS09470 293250294017
LIC_RS09465 294018294797
LIC_RS09460 294802296202
LIC_RS09450 297308297916
LIC_RS09420 303794304618
LIC_RS09415 304751306043
LIC_RS09405 306703307638
LIC_RS09400 307647308573
LIC_RS09385 309571311028
LIC_RS09380 311025311897
LIC_RS09365 313655314680
LIC_RS09350 316405316668
LIC_RS09305 323052323645
LIC_RS09290 326087327484
LIC_RS09280 328166329167
LIC_RS09250 333580333915
LIC_RS09245 333912336161
LIC_RS09230 339528340562
LIC_RS09225 340548340805
LIC_RS09205 341753342526
LIC_RS09200 342523343470
LIC_RS09175 347418348908
LIC_RS09145 353933354910
LIC_RS09135 356030357727
LIC_RS09130 357785359002
LIC_RS09105 363295363936
LIC_RS09090 365689366669
LIC_RS09070 369863370954
LIC_RS09065 371114371287
LIC_RS09030 376971377378
LIC_RS09025 377409378485
LIC_RS09020 378503379729
BACT000057 (rpmB) 385214385495
LIC_RS08940 395775397070
LIC_RS08935 397080398138
LIC_RS08930 398135398737
LIC_RS08760 435683438517
LIC_RS08735 441835443226
398900otherNZ_AKWZ02000001.1347496Leptospira fainei serovar Hurstbridge str. BUT 6 ctg1134728687811, whole genome shotgun sequenceLIC_RS12770 1974020513 EMBL GBK
LIC_RS05360 4504946353
LIC_RS05355 4637447474
LIC_RS05300 6181162152
LIC_RS05230 7280474642
LIC_RS05225 7473476758
LIC_RS05180 7966180002
LIC_RS05185 8007281196
LIC_RS05190 8119381681
LIC_RS04070 8443087210
LIC_RS04065 8764388599
LIC_RS04060 8862189340
LIC_RS05885 9175793127
LIC_RS05880 9312493810
LIC_RS05875 9404395971
LIC_RS05855 9845899561
LIC_RS05850 99558100376
LIC_RS05845 100379101371
LIC_RS18335 102868103737
LIC_RS18315 106183106416
LIC_RS18310 106873107637
LIC_RS12485 107778108782
BACT000061 (rpmF) 108927109127
LIC_RS12500 109203109814
BACT000001 (rpsA) 110581112263
LIC_RS12530 115286116377
LIC_RS12540 116909117685
LIC_RS12545 117699118061
LIC_RS12550 118066119139
LIC_RS12555 119169122351
LIC_RS12560 122352122846
BACT000049 (rplT) 124868125221
BACT000064 (rpmI) 125221125424
LIC_RS06395 139397140800
LIC_RS06390 140827141687
LIC_RS06385 141701143215
LIC_RS06375 143771144295
LIC_RS06370 144298144591
LIC_RS06340 147477148280
LIC_RS04530 160524161075
LIC_RS04525 161075162448
LIC_RS04520 162470165544
LIC_RS03990 270190271020
LIC_RS03980 272452274020
LIC_RS03960 278883279377
LIC_RS03955 279374282139
BACT000009 (rpsI) 282223282621
BACT000042 (rplM) 282634283083
LIC_RS14120 289825291306
LIC_RS14115 291303292952
LIC_RS14110 292953294899
LIC_RS14095 295827296885
LIC_RS14090 296892298181
LIC_RS14085 298193298672
LIC_RS14080 298672299895
LIC_RS14075 299892300416
LIC_RS14070 300413300973
LIC_RS12250 317678319504
LIC_RS12210 325255325812
LIC_RS09535 343776344651
LIC_RS09545 345043345843
398911otherNZ_AKWZ02000011.1331619Leptospira fainei serovar Hurstbridge str. BUT 6 ctg1134728687810, whole genome shotgun sequenceLIC_RS18695 99176101065 EMBL GBK
LIC_RS18700 101055101546
LIC_RS18705 101543103150
LIC_RS18710 103223104134
LIC_RS18835 123558125057
BACT000062 (rpmG) 136828136980
LIC_RS19060 143918146098
LIC_RS19065 146104147135
LIC_RS18505 163539164771
LIC_RS18495 165507166358
LIC_RS18490 166355166894
LIC_RS18445 179565180437
LIC_RS18440 180568182316
LIC_RS18435 182349183644
LIC_RS18410 189241190554
LIC_RS18565 194357194917
LIC_RS19290 242230243177
LIC_RS19305 244232244957
LIC_RS19340 247102247377
LIC_RS19375 248090249520
LIC_RS19385 251566252612
LIC_RS19420 259968260999
LIC_RS19435 263422264267
LIC_RS18020 273689274654
LIC_RS18025 274651275952
LIC_RS18040 277566278588
LIC_RS18045 278585279934
LIC_RS18075 285401286327
LIC_RS18080 286311287012
LIC_RS18115 291886293190
LIC_RS18170 300244301254
LIC_RS18185 302937303881
LIC_RS18205 307176309005
398903otherNZ_AKWZ02000004.1204871Leptospira fainei serovar Hurstbridge str. BUT 6 ctg1134728687806, whole genome shotgun sequencex_2 21933503 EMBL GBK
LIC_RS11760 89529707
LIC_RS11765 970410720
LIC_RS11770 1073012100
LIC_RS11780 1245013058
LIC_RS11785 1338814566
LIC_RS11805 1684318405
LIC_RS11815 1899719662
LIC_RS11825 2056120911
LIC_RS13970 8839189668
LIC_RS13975 8981490380
LIC_RS13980 9038091168
LIC_RS13170 107355108749
LIC_RS02120 116401118470
LIC_RS02115 118418118843
LIC_RS02110 118886119347
LIC_RS04145 153988155031
398899otherNZ_AKWZ02000006.1175453Leptospira fainei serovar Hurstbridge str. BUT 6 ctg1134728687813, whole genome shotgun sequenceLIC_RS05505 8802349 EMBL GBK
LIC_RS05500 24083424
LIC_RS12300 71058526
LIC_RS12325 1289915682
LIC_RS12330 1575817581
LIC_RS12375 3074031858
LIC_RS12980 3474435355
LIC_RS12990 3661137549
LIC_RS12995 3754239491
LIC_RS13010 4066641676
LIC_RS13015 4166642400
LIC_RS13020 4239743722
LIC_RS13025 4373144867
LIC_RS13855 5064052727
BACT000015 (rpsO) 5273853004
LIC_RS13880 5709158452
LIC_RS15540 6430166832
LIC_RS15535 6711067835
LIC_RS04450 7123371703
LIC_RS04445 7175073663
LIC_RS04440 7368676013
LIC_RS04430 7621977034
LIC_RS04425 7703178245
LIC_RS04420 7826780003
LIC_RS04415 8001081698
LIC_RS04410 8169282861
LIC_RS04405 8286983783
LIC_RS04400 8377684456
LIC_RS04395 8450285056
LIC_RS04385 8580286401
BACT000002 (rpsB) 8641387333
LIC_RS04370 8762488007
LIC_RS04365 8801888239
LIC_RS04360 8824488624
LIC_RS04350 8966390487
LIC_RS04340 9131792201
398902otherNZ_AKWZ02000009.1154273Leptospira fainei serovar Hurstbridge str. BUT 6 ctg1134728687814, whole genome shotgun sequenceLIC_RS05750 1335914207 EMBL GBK
LIC_RS05725 1827219171
LIC_RS11445 4401144475
LIC_RS11460 4551346574
LIC_RS11470 4745647707
LIC_RS11495 5093352756
LIC_RS11500 5276854411
LIC_RS06555 6189063002
LIC_RS06550 6314064021
LIC_RS06535 6571566986
pfkB_1 (pfkB_1) 6724867679
LIC_RS12945 141659142486
LIC_RS12935 143393144457
398909otherNZ_AKWZ02000012.1100707Leptospira fainei serovar Hurstbridge str. BUT 6 ctg1134728687808, whole genome shotgun sequenceLIC_RS19220 2834929191 EMBL GBK
398907otherNZ_AKWZ02000007.174721Leptospira fainei serovar Hurstbridge str. BUT 6 ctg1134728687815, whole genome shotgun sequenceLIC_RS06005 24053148 EMBL GBK
LIC_RS06015 43194831
LIC_RS06140 1069911688
LIC_RS06705 2404125330
LIC_RS06740 3133531802
LIC_RS06745 3193733061
LIC_RS06815 6655167021
LIC_RS06825 6929370180
398904 other NZ_AKWZ02000008.1 14682 Leptospira fainei serovar Hurstbridge str. BUT 6 ctg1134728687807, whole genome shotgun sequence
398906 other NZ_AKWZ02000005.1 2835 Leptospira fainei serovar Hurstbridge str. BUT 6 ctg1134728687812, whole genome shotgun sequence
398908 other NZ_AKWZ02000013.1 1192 Leptospira fainei serovar Hurstbridge str. BUT 6 ctg1134728687805, whole genome shotgun sequence