Sequence bin for 202303412

Contig summary statistics

Contigs
38
Total length
4,528,611
Minimum length
336
Maximum length
982,634
Mean length
119,174
N50
427,193
L50
4
N90
87,429
L90
12
N95
65,531
L95
15

FASTAEMBLGBKGFF3

SequenceSequencing methodOriginal designationLengthCommentsLocusStartEndDirectionAnnotation
359887Illuminacontig_0001982634LIC_RS01435 67367506 EMBL GBK
LIC_RS01395 1109113211
LIC_RS01380 1526516323
LIC_RS01375 1632316964
LIC_RS02310 2004221649
LIC_RS02315 2167022713
LIC_RS02325 2455125942
BACT000020 (rpsT) 2606926341
LIC_RS02350 2785628650
LIC_RS02255 5609058057
LIC_RS02250 5830658869
LIC_RS02240 5956160496
LIC_RS02365 7550576284
LIC_RS01870 8413084891
LIC_RS01865 8490385862
LIC_RS01860 8589586485
LIC_RS01855 8648988336
LIC_RS01850 8833389319
LIC_RS16350 107250107537
LIC_RS16320 119183120511
LIC_RS02515 141733143085
LIC_RS02520 143185143934
LIC_RS02715 155275155829
LIC_RS02720 155839156798
LIC_RS02725 156826157944
LIC_RS02730 157952159880
LIC_RS02740 160610161638
LIC_RS16170 185470186006
LIC_RS16175 186043187371
LIC_RS16195 192311193309
LIC_RS16225 201038202021
LIC_RS16230 202018202797
LIC_RS16285 205993206847
LIC_RS01610 235203235595
LIC_RS01605 235604238495
LIC_RS16505 240978241631
LIC_RS16515 242017243366
LIC_RS16565 252007254412
LIC_RS16570 254538257381
icdA_2 (icdA_2) 274563275119
icdA_3 (icdA_3) 274565275119
LIC_RS16780 299298300764
LIC_RS16785 300805301974
LIC_RS16800 303021303416
LIC_RS16825 305778307169
LIC_RS16895 323964324941
LIC_RS01005 336871337809
LIC_RS00815 343790345166
LIC_RS00810 345174345884
BACT000063 (rpmH) 348324348485
LIC_RS00525 374799375863
LIC_RS17790 405855406184
LIC_RS17750 411331413241
LIC_RS17745 413274414542
LIC_RS17740 414646415095
LIC_RS17735 415096415356
LIC_RS17510 429456431423
LIC_RS00385 449357450067
LIC_RS00380 450064450912
LIC_RS00355 455930456301
LIC_RS00340 457521458294
LIC_RS00335 458369458899
LIC_RS00260 475722476594
LIC_RS00245 479922481241
pntA_2 (pntA_2) 482110482634
pntA_1 (pntA_1) 482110482634
LIC_RS00205 489067490035
LIC_RS00160 499781501760
LIC_RS00150 502729503574
LIC_RS00095 512222512965
LIC_RS00035 520729521688
LIC_RS00030 521685524198
LIC_RS00025 524229526142
LIC_RS17970 531848532771
LIC_RS17965 532862534772
LIC_RS17935 539180539941
LIC_RS17930 539945540820
LIC_RS17905 541744542091
LIC_RS17900 542091543086
LIC_RS17895 543206544012
LIC_RS17890 544005545258
LIC_RS17880 546760547614
LIC_RS17875 547618549189
LIC_RS17870 549198549791
LIC_RS17865 549784550131
LIC_RS17860 550143551615
LIC_RS00575 560822561403
LIC_RS00580 561400562032
LIC_RS00585 562029562760
LIC_RS00625 569515570483
LIC_RS00655 579047579985
LIC_RS00725 595310596797
LIC_RS17445 620331620564
LIC_RS17420 626658627623
LIC_RS17415 627620628615
LIC_RS17410 628612629649
LIC_RS17405 629646630668
LIC_RS17350 636436637203
LIC_RS17345 637200638108
LIC_RS17340 638108639352
LIC_RS17230 661747663891
LIC_RS17225 663888665273
LIC_RS17210 666433667995
LIC_RS17185 670725671384
LIC_RS17180 671381672112
LIC_RS17115 687942688355
LIC_RS17110 688365688847
LIC_RS17070 693291694223
LIC_RS17065 694236694964
LIC_RS17045 698605700005
LIC_RS16980 708909710174
LIC_RS16975 710193711503
LIC_RS01070 718195719061
LIC_RS01090 721476722498
LIC_RS01095 722510724111
LIC_RS01160 734416735321
LIC_RS01150 736659740189
LIC_RS01205 751046752428
LIC_RS01210 752430753122
LIC_RS01760 754093756633
LIC_RS01745 757948759264
LIC_RS01690 761658762809
LIC_RS01660 767735767938
LIC_RS01645 770218770652
LIC_RS01635 771322772413
LIC_RS01545 774616774996
LIC_RS01550 775020775481
LIC_RS01555 775523775954
LIC_RS01500 778653780062
LIC_RS01495 780073780354
LIC_RS02025 797964798131
LIC_RS02030 798207800150
LIC_RS02035 800178800513
LIC_RS03010 841220843106
LIC_RS03110 860474860890
LIC_RS03035 903789906530
LIC_RS02770 916899918782
LIC_RS02780 920233922656
LIC_RS15510 944296945315
359903Illuminacontig_0005615602LIC_RS12770 1866119434 EMBL GBK
LIC_RS05360 4397145275
LIC_RS05355 4529846398
LIC_RS05300 5911159452
LIC_RS05230 7011971957
LIC_RS05225 7204974073
LIC_RS05180 7698277317
LIC_RS05185 7738778511
LIC_RS05190 7850878996
LIC_RS04065 8496785920
LIC_RS04060 8594286661
LIC_RS05885 8907790447
LIC_RS05880 9044491133
LIC_RS05875 9129993290
LIC_RS05855 9577596878
LIC_RS05850 9687597693
LIC_RS05845 9769698688
LIC_RS18335 100186101055
LIC_RS18330 101130102221
LIC_RS18315 103501103734
LIC_RS18310 104191104955
LIC_RS12485 105096106100
BACT000061 (rpmF) 106245106445
LIC_RS12500 106521107132
BACT000001 (rpsA) 107900109582
LIC_RS12530 112632113723
LIC_RS12540 114255115031
LIC_RS12545 115046115408
LIC_RS12550 115413116486
LIC_RS12555 116516119698
LIC_RS12560 119699120193
BACT000049 (rplT) 122211122564
BACT000064 (rpmI) 122564122767
LIC_RS06395 136092137495
LIC_RS06390 137522138382
LIC_RS06385 138396139910
LIC_RS06375 140466140990
LIC_RS06370 140993141286
LIC_RS06340 144176144979
LIC_RS04540 155693156916
LIC_RS04530 157529158080
LIC_RS04525 158080159453
LIC_RS04520 159475162549
LIC_RS06510 167491167718
LIC_RS06490 170307172253
LIC_RS06485 172254172757
LIC_RS06480 172754173878
LIC_RS06475 173954174976
LIC_RS06470 175168176721
sucA_1 (sucA_1) 178937179383
LIC_RS12660 180137181540
LIC_RS12665 181554182801
LIC_RS12675 185550186524
LIC_RS12680 186605187444
LIC_RS14300 205202205900
LIC_RS14305 205956206294
LIC_RS06115 207755209737
LIC_RS06110 210005211399
LIC_RS14425 222860223795
LIC_RS14430 223773224804
BACT000050 (rplU) 272749273060
BACT000056 (rpmA) 273381273638
LIC_RS14230 275642276904
caiB_1 (caiB_1) 292730293131
LIC_RS13405 391093392361
LIC_RS13420 396151396561
LIC_RS13425 396660397781
LIC_RS13470 401864402697
LIC_RS03820 405054406148
LIC_RS03275 410534411775
LIC_RS03270 411811412125
LIC_RS03515 416712417371
LIC_RS03510 417368417616
LIC_RS03505 417592418464
LIC_RS03500 418461419612
LIC_RS13145 426698427972
LIC_RS13135 429249431261
BACT000046 (rplQ) 448017448586
LIC_RS14615 448588449565
BACT000004 (rpsD) 449588450211
BACT000011 (rpsK) 450224450631
BACT000013 (rpsM) 450634451011
BACT000065 (rpmJ) 451014451127
adk_2 (adk_2) 451420451849
adk_3 (adk_3) 451421451849
secY_3 (secY_3) 451958452458
BACT000044 (rplO) 453438453959
BACT000059 (rpmD) 453979454158
BACT000005 (rpsE) 454164454679
BACT000047 (rplR) 454683455051
BACT000035 (rplF) 455056455595
BACT000008 (rpsH) 455620456018
BACT000014 (rpsN) 456038456223
BACT000034 (rplE) 456238456786
BACT000053 (rplX) 456790457143
BACT000043 (rplN) 457143457535
BACT000017 (rpsQ) 457537457806
BACT000058 (rpmC) 457809458111
BACT000045 (rplP) 458108458521
BACT000003 (rpsC) 458554459231
BACT000051 (rplV) 459243459575
BACT000019 (rpsS) 459575459853
LIC_RS14735 459859460698
BACT000031 (rplB) 459859460698
BACT000052 (rplW) 460702461010
BACT000033 (rplD) 461010461645
BACT000032 (rplC) 461661462281
BACT000010 (rpsJ) 462293462601
LIC_RS14760 462613463818
BACT000007 (rpsG) 480796481269
BACT000012 (rpsL) 481283481657
LIC_RS03900 481733485938
BACT000036 (rplL) 489766490149
BACT000039 (rplJ) 490195490728
BACT000030 (rplA) 490754491446
BACT000040 (rplK) 491451491879
LIC_RS03870 491920492465
LIC_RS15120 504842506821
LIC_RS15130 508338508799
LIC_RS15195 517869518771
LIC_RS15200 518783519238
LIC_RS15215 521268521549
LIC_RS15220 521634523184
LIC_RS03705 547780549909
LIC_RS03700 549913551343
lipL41_2 (lipL41_2) 573968574460
lipL41_3 (lipL41_3) 573969574460
LIC_RS15250 574770575741
359873Illuminacontig_0004505398LIC_RS08735 4685548246 EMBL GBK
LIC_RS08760 5156554399
LIC_RS08930 9139391995
LIC_RS08935 9199293050
LIC_RS08940 9305994354
BACT000057 (rpmB) 104631104912
LIC_RS09020 110398111624
LIC_RS09025 111642112718
LIC_RS09030 112749113156
LIC_RS09065 118840119013
LIC_RS09070 119174120265
LIC_RS09090 123459124439
LIC_RS09105 126193126834
LIC_RS09130 131136132353
LIC_RS09135 132410134107
LIC_RS09145 135227136204
LIC_RS09150 136238137656
LIC_RS09175 141376142866
LIC_RS09200 146814147761
LIC_RS09205 147758148531
LIC_RS09225 149478149735
LIC_RS09230 149721150755
LIC_RS09245 154114156363
LIC_RS09250 156360156695
LIC_RS09280 161099162100
LIC_RS09305 166619167212
LIC_RS09350 173714173977
LIC_RS09365 175708176733
LIC_RS09380 178492179364
LIC_RS09385 179361180818
LIC_RS09400 181815182741
LIC_RS09405 182750183685
LIC_RS09415 184345185637
LIC_RS09420 185770186594
LIC_RS09450 192472193080
LIC_RS09460 194185195585
LIC_RS09465 195590196369
LIC_RS09470 196373197137
LIC_RS09475 197207197956
LIC_RS09590 199965200822
LIC_RS09600 201441202703
LIC_RS09605 202770204008
LIC_RS09675 208419209393
LIC_RS09685 210792211808
LIC_RS10215 223998224687
LIC_RS10220 224692226608
LIC_RS10265 228393230198
LIC_RS09955 234708235313
LIC_RS09945 235700236701
LIC_RS09940 236771237316
LIC_RS10315 247252249249
LIC_RS10345 250984252291
LIC_RS10350 252372253226
LIC_RS10355 253243254208
LIC_RS10360 254205255617
LIC_RS07490 257642258409
LIC_RS07485 258406259869
LIC_RS07480 259866260156
LIC_RS07475 260183261598
LIC_RS07470 261602264538
LIC_RS07455 266192269632
LIC_RS07450 269641270492
LIC_RS07445 270502271782
359875Illuminacontig_0006427193LIC_RS19220 3382034662 EMBL GBK
LIC_RS18185 128144129088
LIC_RS18170 130771131781
LIC_RS18115 138795140099
LIC_RS18080 144965145666
LIC_RS18075 145650146576
LIC_RS18045 152045153394
LIC_RS18040 153391154413
LIC_RS18025 156027157328
LIC_RS18020 157325158290
LIC_RS19435 167706168551
LIC_RS19420 170977172008
LIC_RS19385 179349180395
LIC_RS19375 182433183863
LIC_RS19340 184570184845
LIC_RS19305 186978187703
LIC_RS19290 188759189706
LIC_RS18565 237540238100
LIC_RS18410 241905243218
LIC_RS18435 248843250138
LIC_RS18440 250176251924
LIC_RS18445 252055252927
LIC_RS18490 265595266134
LIC_RS18495 266131266982
LIC_RS18505 267719268951
LIC_RS19065 285663286697
LIC_RS19060 286703288883
BACT000062 (rpmG) 295825295977
LIC_RS18835 307751309250
LIC_RS18710 328686329597
LIC_RS18705 329669331276
LIC_RS18700 331273331764
LIC_RS18695 331754333643
359892Illuminacontig_0007373448LIC_RS04145 3541236455 EMBL GBK
LIC_RS02110 7165072111
LIC_RS02115 7215472579
LIC_RS02120 7252774596
LIC_RS13170 8219283586
LIC_RS13980 100035100823
LIC_RS13975 100823101350
LIC_RS13970 101534102811
LIC_RS11825 268673269023
LIC_RS11815 269922270587
LIC_RS11805 271179272741
LIC_RS11785 275032276210
LIC_RS11780 276524277132
LIC_RS11770 277482278852
LIC_RS11765 278862279878
LIC_RS11760 279875280630
x_2 286068287381
LIC_RS09545 288915289715
LIC_RS09535 290107290982
LIC_RS12210 308992309549
LIC_RS12250 315303317126
LIC_RS14070 333886334446
LIC_RS14075 334443334967
LIC_RS14080 334964336187
LIC_RS14085 336187336666
LIC_RS14090 336678337967
LIC_RS14095 337974339032
LIC_RS14110 339960341906
LIC_RS14115 341907343556
LIC_RS14120 343553345034
BACT000042 (rplM) 351873352322
BACT000009 (rpsI) 352335352733
LIC_RS03955 352817355582
LIC_RS03960 355579356070
LIC_RS03980 357821359389
LIC_RS03990 360821361651
359901Illuminacontig_0008350234BACT000006 (rpsF) 4159041865 EMBL GBK
LIC_RS10785 4185842298
BACT000018 (rpsR) 4231442634
BACT000038 (rplI) 4264643110
LIC_RS10770 4312144443
LIC_RS10765 4446546324
LIC_RS10755 4730349711
LIC_RS10710 5533456326
LIC_RS10705 5632957441
tpiA_1 (tpiA_1) 5891959344
LIC_RS10675 5951560708
LIC_RS10670 6070861715
LIC_RS10595 7448774843
LIC_RS10590 7485875391
LIC_RS06850 8544187078
LIC_RS06855 8709887385
lipL32_3 (lipL32_3) 9432794776
lipL32_2 (lipL32_2) 9432794776
LIC_RS06950 9570096860
LIC_RS07020 113221113556
LIC_RS07025 113916114986
LIC_RS07035 115779116621
LIC_RS07040 116618116881
LIC_RS07045 116891117673
LIC_RS07055 118878120995
LIC_RS07060 121035122312
LIC_RS07075 123993124793
LIC_RS07080 124944126929
LIC_RS07095 128587128868
LIC_RS07115 131027131668
LIC_RS07125 132401133765
LIC_RS07180 143060145207
LIC_RS07190 145443146744
LIC_RS07195 146840148951
LIC_RS07200 148992149264
LIC_RS07210 153039154163
LIC_RS07215 154521156230
LIC_RS07220 156227156706
LIC_RS07240 160278162080
LIC_RS07260 170386170982
LIC_RS07265 171002172273
LIC_RS10100 176159176473
LIC_RS10095 176510178660
LIC_RS10090 178677179807
LIC_RS10065 183816184391
LIC_RS09925 192476193171
LIC_RS09920 193259195982
LIC_RS09905 197095198504
LIC_RS09790 223359224885
LIC_RS09785 224928225719
LIC_RS07580 239694240638
LIC_RS07640 256317257075
LIC_RS07680 266670266861
LIC_RS07685 266904267623
LIC_RS08265 272971274728
LIC_RS08270 274733275710
LIC_RS08280 276417277187
LIC_RS08300 280138280743
LIC_RS08305 280746281201
LIC_RS08345 290183292222
LIC_RS08405 302112303287
LIC_RS08445 309438310082
LIC_RS08460 311602313143
LIC_RS08465 313145313771
LIC_RS08470 313859314308
359885Illuminacontig_0013227424LIC_RS12935 83479411 EMBL GBK
LIC_RS12945 1031811145
pfkB_1 (pfkB_1) 8305483485
LIC_RS06535 8374185012
LIC_RS06550 8670687587
LIC_RS06555 8772588840
LIC_RS11500 9631397956
LIC_RS11495 9797099901
LIC_RS11470 103019103270
LIC_RS11460 104152105213
LIC_RS11445 106252106716
LIC_RS05725 131529132428
LIC_RS05750 136491137339
LIC_RS06005 147885148628
LIC_RS06015 149820150332
LIC_RS06140 156458157447
LIC_RS06700 169009169692
LIC_RS06705 169761171062
LIC_RS06740 176602177069
LIC_RS06745 177202178326
LIC_RS06815 211683212153
LIC_RS06825 214427215314
359906Illuminacontig_0010147907LIC_RS13855 18453932 EMBL GBK
BACT000015 (rpsO) 39434209
LIC_RS13880 82099570
LIC_RS15540 1546417995
LIC_RS15535 1827918965
LIC_RS04450 2340723877
LIC_RS04445 2392425837
LIC_RS04430 2839229207
LIC_RS04425 2920430418
LIC_RS04420 3044032176
LIC_RS04415 3218333871
LIC_RS04410 3386535034
LIC_RS04405 3504235956
LIC_RS04400 3594936629
LIC_RS04395 3667537229
LIC_RS04385 3797238571
BACT000002 (rpsB) 3858439495
LIC_RS04370 3978640169
LIC_RS04365 4018140402
LIC_RS04360 4040740787
LIC_RS04350 4182642650
LIC_RS04345 4266143467
LIC_RS04340 4347944363
LIC_RS14485 136717137157
LIC_RS14490 137327138100
LIC_RS14520 141980143269
LIC_RS14530 144649145515
359893Illuminacontig_0003140008LIC_RS08230 1907819767 EMBL GBK
LIC_RS08225 1980820854
LIC_RS08220 2085621737
LIC_RS08210 2206422897
LIC_RS08190 2443224995
LIC_RS08180 2601126580
LIC_RS08175 2656828118
LIC_RS08150 3130932424
LIC_RS08145 3244633735
LIC_RS08090 4101241536
LIC_RS08060 4610946576
LIC_RS08055 4660547831
LIC_RS08050 4784249515
LIC_RS08045 4952051370
LIC_RS08040 5131852226
BACT000048 (rplS) 5896959397
LIC_RS07985 5939460062
BACT000016 (rpsP) 6079361059
LIC_RS07965 6122161871
LIC_RS07940 6659167934
LIC_RS07935 6794169734
LIC_RS07930 6973169997
LIC_RS07925 6997270934
LIC_RS07920 7093972369
LIC_RS07915 7236673091
LIC_RS07900 7509075944
LIC_RS07895 7594177560
LIC_RS07890 7768478172
LIC_RS07865 8244483001
LIC_RS07855 8331484165
LIC_RS07825 102678103040
LIC_RS07780 110020112764
LIC_RS07775 112771114426
LIC_RS07760 117782118087
LIC_RS07745 118980119516
LIC_RS08660 124331125548
LIC_RS08675 127354129126
LIC_RS08685 130936131385
BACT000021 (rpsU) 131427131636
359902Illuminacontig_0002119100LIC_RS15925 11111863 EMBL GBK
LIC_RS15275 1321814420
LIC_RS15280 1446915695
LIC_RS03210 1854218766
LIC_RS03215 1877319555
LIC_RS03220 1958920416
LIC_RS03225 2044020964
LIC_RS03230 2096421704
LIC_RS03235 2176322101
LIC_RS02455 7098672257
LIC_RS02460 7241675064
359882 Illumina contig_0014 113718
359895 Illumina contig_0015 87429
359880Illuminacontig_001278677LIC_RS13210 30223876 EMBL GBK
LIC_RS13265 1076812027
LIC_RS13760 4299943931
LIC_RS13755 4392844689
359908Illuminacontig_000978570LIC_RS11310 21553180 EMBL GBK
LIC_RS11320 35765573
LIC_RS11590 963811905
LIC_RS11595 1190213059
LIC_RS11625 1673017395
LIC_RS05555 2081922789
LIC_RS05535 2513125454
LIC_RS05530 2553726706
LIC_RS05505 2961631085
LIC_RS05500 3114432160
LIC_RS12300 3583537256
LIC_RS12325 4162144404
LIC_RS12330 4448046309
LIC_RS12375 6010161219
LIC_RS12980 6410864719
LIC_RS12990 6597566913
LIC_RS12995 6690668855
LIC_RS13010 7003071040
LIC_RS13015 7103071764
LIC_RS13020 7176173086
LIC_RS13025 7309574231
359891 Illumina contig_0016 65531
359907Illuminacontig_001762999LIC_RS04720 29883947 EMBL GBK
359890 Illumina contig_0018 56534
359872Illuminacontig_001134176x_1 69228919 EMBL GBK
LIC_RS13515 1276312954
LIC_RS13510 1293813735
BACT000060 (rpmE) 1379913999
LIC_RS13500 1402415433
LIC_RS14570 2090521831
LIC_RS13185 3163432806
LIC_RS13190 3283133715
359877 Illumina contig_0019 26362
359898 Illumina contig_0020 12474
359878 Illumina contig_0021 4480
359889 Illumina contig_0022 3026
359899 Illumina contig_0023 2658
359881Illuminacontig_0024210116S_broomii 2641768 EMBL GBK
rrs2_3 (rrs2_3) 12211670
359896 Illumina contig_0025 2032
359905 Illumina contig_0026 1962
359904 Illumina contig_0027 1508
359888 Illumina contig_0028 677
359886 Illumina contig_0029 644
359897 Illumina contig_0030 563
359900 Illumina contig_0031 539
359874 Illumina contig_0032 536
359879 Illumina contig_0033 491
359876 Illumina contig_0034 425
359883 Illumina contig_0035 411
359884 Illumina contig_0036 407
359909 Illumina contig_0037 397
359894 Illumina contig_0038 336