Sequence bin for 202302334

Contig summary statistics

Contigs
68
Total length
4,453,723
Minimum length
381
Maximum length
966,200
Mean length
65,496
N50
521,765
L50
3
N90
69,244
L90
12
N95
50,186
L95
16

FASTAEMBLGBKGFF3

SequenceSequencing methodOriginal designationLengthCommentsLocusStartEndDirectionAnnotation
350995Illuminacontig_0001966200LIC_RS01070 14382304 EMBL GBK
LIC_RS01090 44835484
LIC_RS01095 54947098
LIC_RS01160 1773418633
LIC_RS01150 1884622376
LIC_RS01205 2934130714
LIC_RS01210 3071631393
LIC_RS01760 3249835044
LIC_RS01745 3627137584
LIC_RS01690 4427845414
LIC_RS01660 5015350347
LIC_RS01645 5262253059
LIC_RS01545 5814058523
LIC_RS01550 5852658987
LIC_RS01555 5905559486
LIC_RS01500 6527866678
LIC_RS01495 6668366967
lfb1 140515140793
LIC_RS02025 172050172220
LIC_RS02030 172300174237
LIC_RS02035 174497174832
LIC_RS03010 182699184597
LIC_RS03110 209998210414
LIC_RS02240 236424237362
LIC_RS02250 238061238624
LIC_RS02255 238782240749
LIC_RS15980 341014342351
LIC_RS15250 370850371824
LIC_RS15275 374537375748
LIC_RS15280 375775377004
LIC_RS03210 380253380477
LIC_RS03215 380484381266
LIC_RS03220 381282382109
LIC_RS03225 382150382674
LIC_RS03230 382674383414
LIC_RS03235 383407383745
LIC_RS03700 409085410503
LIC_RS03705 410516412654
LIC_RS15220 434414435964
LIC_RS15215 436094436375
LIC_RS15200 438521438982
LIC_RS15195 438985439878
LIC_RS15130 450488450949
LIC_RS15120 451666453666
LIC_RS03870 472490473035
BACT000040 (rplK) 473068473493
BACT000030 (rplA) 473513474205
BACT000039 (rplJ) 474233474766
BACT000036 (rplL) 474817475197
LIC_RS03900 479129483349
BACT000012 (rpsL) 483570483944
BACT000007 (rpsG) 483961484434
LIC_RS14760 490016491221
BACT000010 (rpsJ) 491234491542
BACT000032 (rplC) 491555492175
BACT000033 (rplD) 492193492828
BACT000052 (rplW) 492825493139
LIC_RS14735 493143493982
BACT000031 (rplB) 493143493982
BACT000019 (rpsS) 493990494271
BACT000051 (rplV) 494271494603
BACT000003 (rpsC) 494616495293
BACT000045 (rplP) 495316495729
BACT000058 (rpmC) 495726496010
BACT000017 (rpsQ) 496020496289
BACT000043 (rplN) 496291496683
BACT000053 (rplX) 496683497036
BACT000034 (rplE) 497040497588
BACT000014 (rpsN) 497608497793
BACT000008 (rpsH) 497813498214
BACT000035 (rplF) 498241498780
BACT000047 (rplR) 498784499152
BACT000005 (rpsE) 499154499660
BACT000059 (rpmD) 499672499851
BACT000044 (rplO) 499868500410
secY 500426501808
BACT000065 (rpmJ) 502607502720
BACT000013 (rpsM) 502723503100
BACT000011 (rpsK) 503103503513
BACT000004 (rpsD) 503525504148
LIC_RS14615 504171505148
BACT000046 (rplQ) 505150505686
LIC_RS13135 507430509439
LIC_RS13145 510886512163
LIC_RS03500 520925522058
LIC_RS03505 522055522921
LIC_RS03510 522897523145
LIC_RS03515 523142523801
LIC_RS03270 533875534186
LIC_RS03275 534192535433
LIC_RS03820 542414543505
LIC_RS13470 546886547734
LIC_RS13425 553856554974
LIC_RS13420 555028555438
LIC_RS13405 559194560465
LIC_RS13170 685344686693
LIC_RS13980 699375700175
LIC_RS13975 700175700702
LIC_RS13970 700971702251
LIC_RS11825 732939733289
LIC_RS11815 734179734844
LIC_RS11805 735480737048
LIC_RS11785 740154741332
LIC_RS11780 742635743246
LIC_RS11770 743565744962
LIC_RS11765 744959745975
LIC_RS11760 745972746736
x_2 752736754046
LIC_RS14230 758267759517
BACT000056 (rpmA) 761666761920
BACT000050 (rplU) 762233762547
LIC_RS12250 785606787471
LIC_RS12210 791369791917
LIC_RS14070 808155808715
LIC_RS14075 808712809245
LIC_RS14080 809247810464
LIC_RS14085 810464810943
LIC_RS14095 812289813329
LIC_RS14110 814390816330
LIC_RS14115 816332818029
LIC_RS14120 818026819498
BACT000042 (rplM) 833033833482
BACT000009 (rpsI) 833493833891
LIC_RS03955 833979836744
LIC_RS03960 836741837232
LIC_RS03980 839776841362
LIC_RS03990 842951843778
LIC_RS06340 907728908531
LIC_RS06370 912823913125
LIC_RS06375 913129913650
LIC_RS06385 914205915716
LIC_RS06390 915731916591
LIC_RS06395 916616918019
LIC_RS06470 929590931152
LIC_RS06475 931345932367
LIC_RS06480 932448933554
LIC_RS06485 933551934063
LIC_RS06490 934065936017
LIC_RS06510 939417939644
350987Illuminacontig_0002895988LIC_RS16975 51856495 EMBL GBK
LIC_RS16980 65177782
LIC_RS17045 1279114188
LIC_RS17065 1793218660
LIC_RS17070 1866719596
LIC_RS17110 2711727599
LIC_RS17115 2760928022
LIC_RS17180 4009240820
LIC_RS17185 4081741467
LIC_RS17225 4691448302
LIC_RS17230 4829950434
LIC_RS17340 7613177381
LIC_RS17345 7738178298
LIC_RS17350 7829579032
LIC_RS17405 8385184861
LIC_RS17410 8485885901
LIC_RS17415 8589886881
LIC_RS17420 8690387865
LIC_RS17445 9231592551
LIC_RS17510 119373121337
LIC_RS17735 163807164061
LIC_RS17745 164567165835
LIC_RS17750 165872167782
LIC_RS17790 172100172429
LIC_RS17860 183580185121
LIC_RS17865 185126185473
LIC_RS17870 185466186059
LIC_RS17875 186068187642
LIC_RS17880 187646188494
LIC_RS17890 190043191296
LIC_RS17895 191289192098
LIC_RS17900 192218193237
LIC_RS17905 193238193585
LIC_RS17930 194462195337
LIC_RS17935 195340196101
LIC_RS17965 200650202557
LIC_RS17970 202699203622
LIC_RS00025 209274211199
LIC_RS00030 211218213722
LIC_RS00035 213727214683
LIC_RS00095 222316223059
LIC_RS00150 232602233450
LIC_RS00160 234523236499
LIC_RS00205 245729246697
LIC_RS00245 253603254922
LIC_RS00260 258245259090
LIC_RS00335 276882277403
LIC_RS00340 277404278186
LIC_RS00355 279366279734
LIC_RS00380 284405285250
LIC_RS00385 285339286043
LIC_RS00525 311169312233
LIC_RS00575 318455319075
LIC_RS00580 319072319704
LIC_RS00625 328700329656
LIC_RS00655 338244339182
LIC_RS00725 356447357904
BACT000063 (rpmH) 372125372286
LIC_RS00810 374773375483
LIC_RS00815 375476376846
LIC_RS01005 388687389625
LIC_RS16895 404479405450
LIC_RS16830 419076420233
LIC_RS16825 420301421692
LIC_RS16800 424021424419
LIC_RS16570 482365485214
LIC_RS16565 485295487703
LIC_RS16515 492863494200
LIC_RS16505 494586495248
LIC_RS01605 500005502899
LIC_RS01610 502939503331
LIC_RS04520 540368543433
LIC_RS04525 543453544826
LIC_RS04530 544826545377
LIC_RS04540 545979547202
LIC_RS12680 574322575140
LIC_RS12675 575245576201
LIC_RS12665 578739579992
LIC_RS12660 580006581409
BACT000064 (rpmI) 591005591208
BACT000049 (rplT) 591208591561
LIC_RS12560 593397593891
LIC_RS12555 593891597136
LIC_RS12550 597142598215
LIC_RS12545 598218598580
LIC_RS12540 598598599383
LIC_RS12530 599906600997
BACT000001 (rpsA) 603957605639
LIC_RS12500 606410607027
BACT000061 (rpmF) 607416607616
LIC_RS12485 607622608629
LIC_RS18310 614256615020
LIC_RS18315 615531615764
LIC_RS18330 617080618171
LIC_RS18335 618171619052
LIC_RS05845 620651621556
LIC_RS05850 621558622373
LIC_RS05855 622375623484
LIC_RS05875 626423628363
LIC_RS05880 628483629121
LIC_RS05885 629118630500
LIC_RS04060 637048637767
LIC_RS04065 637792638745
LIC_RS04070 638960641740
LIC_RS04600 661105661521
LIC_RS04605 661522661941
LIC_RS13265 673932675188
LIC_RS13210 682598683446
LIC_RS13190 686848687723
LIC_RS13185 687736688908
LIC_RS14570 695004695930
LIC_RS13500 708431709885
BACT000060 (rpmE) 709905710108
LIC_RS13510 710167710958
LIC_RS13515 710955711143
x_1 715054717045
LIC_RS14530 732556733434
LIC_RS14520 734833736122
LIC_RS14490 740892741659
LIC_RS14485 741778742221
LIC_RS04340 747395748279
LIC_RS04345 748283749092
LIC_RS04350 749110749946
LIC_RS04360 750998751378
LIC_RS04365 751382751603
LIC_RS04370 751612751989
LIC_RS04375 752012752272
BACT000002 (rpsB) 752276753145
LIC_RS04385 753159753755
LIC_RS04395 754495755049
LIC_RS04400 755051755776
LIC_RS04405 755769756683
LIC_RS04410 756689757858
LIC_RS04415 757852759579
LIC_RS04420 759585761318
LIC_RS04425 761321762523
LIC_RS04440 763393765705
LIC_RS04450 767676768152
LIC_RS15535 769682770368
LIC_RS15540 770681773206
LIC_RS13880 780447781841
BACT000015 (rpsO) 785931786197
LIC_RS13025 799137800252
LIC_RS13020 800259801578
LIC_RS13015 801575802321
LIC_RS13010 802296803306
LIC_RS12995 804471806399
LIC_RS12990 806402807340
LIC_RS12980 808590809195
LIC_RS12935 815010816080
LIC_RS06535 880415881704
LIC_RS06550 883325884206
LIC_RS06555 884350885465
351025Illuminacontig_0003521765BACT000006 (rpsF) 1343313708 EMBL GBK
LIC_RS10785 1370114144
BACT000018 (rpsR) 1415714468
BACT000038 (rplI) 1447814927
LIC_RS10770 1494516273
LIC_RS10765 1631618121
LIC_RS10755 1911721537
LIC_RS10710 2779828790
LIC_RS10705 2879029923
LIC_RS10670 3342034427
LIC_RS10595 4989750247
LIC_RS10590 5026050793
LIC_RS10100 151615151929
LIC_RS10095 151955154108
LIC_RS10090 154127155257
LIC_RS10065 159087159659
LIC_RS09925 168457169140
LIC_RS09920 169192171912
LIC_RS09905 173038174447
LIC_RS09790 198738200264
LIC_RS09785 200267201055
LIC_RS09685 212681213700
LIC_RS09675 215172216146
LIC_RS09605 222068223306
LIC_RS09600 223372224634
LIC_RS09590 225334226185
LIC_RS09475 230036230785
LIC_RS09470 230817231581
LIC_RS09465 231587232366
LIC_RS09460 232363233892
LIC_RS09450 234974235591
LIC_RS09420 241345242172
LIC_RS09415 242321243619
LIC_RS09405 244414245346
LIC_RS09400 245348246295
LIC_RS09385 247369248781
LIC_RS09380 248778249653
LIC_RS09365 251309252334
LIC_RS09350 254097254363
LIC_RS09305 264115264702
LIC_RS09290 267124268521
LIC_RS09280 269180270181
LIC_RS09250 275032275367
LIC_RS09245 275364277601
LIC_RS09230 280908281939
LIC_RS09225 281936282181
LIC_RS09215 282495282722
LIC_RS09205 283099283872
LIC_RS09200 283869284786
LIC_RS09175 288608290098
LIC_RS09150 293343294767
LIC_RS09145 294807295796
LIC_RS09135 296987298696
LIC_RS09130 298764299981
LIC_RS09105 304417305064
LIC_RS09090 306809307789
LIC_RS09070 310942312006
LIC_RS09065 312387312563
LIC_RS09030 318201318608
LIC_RS09025 318622319698
LIC_RS09020 319717320937
BACT000057 (rpmB) 325715325999
LIC_RS08940 337259338569
LIC_RS08935 338742339803
LIC_RS08760 382003384918
LIC_RS08735 388197389588
BACT000021 (rpsU) 399695399904
LIC_RS08685 399964400410
LIC_RS08675 402243404003
LIC_RS08660 405859407076
LIC_RS07745 411672412208
LIC_RS07760 413298413606
LIC_RS07775 416837418489
LIC_RS07780 418495421242
LIC_RS07795 421476422525
LIC_RS07805 423022423537
LIC_RS07855 441526442377
LIC_RS07865 442713443264
LIC_RS07890 448262448738
LIC_RS07895 448840450462
LIC_RS07900 450459451322
LIC_RS07915 453296454021
LIC_RS07920 454018455439
LIC_RS07925 455442456407
LIC_RS07930 456379456642
LIC_RS07935 456659458449
LIC_RS07940 458458459804
LIC_RS07965 464549465193
BACT000016 (rpsP) 465327465593
LIC_RS07985 466336467004
BACT000048 (rplS) 467001467429
LIC_RS08040 474189475094
LIC_RS08045 475042476883
LIC_RS08050 476886478559
LIC_RS08055 478565479791
LIC_RS08060 479813480289
LIC_RS08090 484931485458
LIC_RS08145 495395496663
LIC_RS08150 496669497799
LIC_RS08175 501127502677
LIC_RS08180 502665503237
LIC_RS08190 504300504842
LIC_RS08210 507952508782
LIC_RS08220 509107509985
LIC_RS08225 509987511030
LIC_RS08230 511075511764
351013Illuminacontig_0004320137LIC_RS08500 3722038365 EMBL GBK
LIC_RS08470 4109841547
LIC_RS08465 4185042476
LIC_RS08460 4248044015
LIC_RS08445 4547046120
LIC_RS08405 5128852457
LIC_RS08345 6282464878
LIC_RS08305 7373674185
LIC_RS08300 7418974794
LIC_RS08280 7786378633
LIC_RS08270 7914080111
LIC_RS08265 8012681883
LIC_RS07685 8985590613
LIC_RS07680 9062090814
LIC_RS07640 100367101119
LIC_RS07580 119879120775
LIC_RS10215 146931147611
LIC_RS10220 147630149543
LIC_RS10265 152607154412
LIC_RS09955 157721158314
LIC_RS09945 158705159718
LIC_RS09940 159730160287
LIC_RS10315 170206172182
LIC_RS10345 175158176465
LIC_RS10350 176547177401
LIC_RS10355 177417178382
LIC_RS10360 178379179794
LIC_RS07490 183180183950
LIC_RS07485 183947185410
LIC_RS07480 185407185697
LIC_RS07475 185724187139
LIC_RS07470 187141190131
LIC_RS07455 191806195162
LIC_RS07450 195381196238
LIC_RS07445 196254197534
LIC_RS07265 242255243517
LIC_RS07260 243532244125
LIC_RS07220 250395250880
LIC_RS07215 250877252586
LIC_RS07210 253041254150
LIC_RS07200 257002257271
LIC_RS07195 257519259522
LIC_RS07190 259692260993
LIC_RS07180 261228263342
LIC_RS07125 272802274166
LIC_RS07115 274901275548
LIC_RS07095 277398277679
LIC_RS07080 279230281218
LIC_RS07075 281241282041
LIC_RS07060 283615284916
LIC_RS07055 284968287091
LIC_RS07045 288513289292
LIC_RS07040 289299289562
LIC_RS07035 289559290362
LIC_RS07025 291214292278
LIC_RS07020 292422292751
LIC_RS06950 312818313978
350980Illuminacontig_0005272075LIC_RS16285 46085465 EMBL GBK
LIC_RS16230 974510524
LIC_RS16225 1052111492
LIC_RS16195 1636217363
LIC_RS16175 2213023464
LIC_RS16170 2347924021
LIC_RS03035 4169244457
LIC_RS02365 5387754653
LIC_RS02350 5663057421
BACT000020 (rpsT) 5913559404
LIC_RS02325 5953860920
LIC_RS02315 6275963805
LIC_RS02310 6382265432
LIC_RS01375 6972470389
LIC_RS01380 7038971444
LIC_RS02515 8951990868
LIC_RS02520 9097191696
LIC_RS02715 99819100367
LIC_RS02720 100391101359
LIC_RS02725 101474102592
LIC_RS02730 102810104744
LIC_RS02740 105431106459
LIC_RS16350 117081117368
LIC_RS16320 123651124952
LIC_RS01850 146848147816
LIC_RS01855 147813149645
LIC_RS01860 149652150245
LIC_RS01865 150477151436
LIC_RS01870 151448152209
LIC_RS02770 166468168357
LIC_RS02780 169894172329
LIC_RS15510 209302210318
LIC_RS02455 259322260602
351009Illuminacontig_0006260782LIC_RS13755 2277523536 EMBL GBK
LIC_RS13760 2353324474
LIC_RS04145 6768768727
LIC_RS02110 9288093341
LIC_RS02115 9334293758
LIC_RS02120 9375195817
LIC_RS09545 112715113464
LIC_RS09535 114073114945
LIC_RS14430 224381225406
LIC_RS14425 225381226295
LIC_RS06110 245997247391
LIC_RS06115 247556249538
LIC_RS14305 251476251808
LIC_RS14300 251815252573
351044Illuminacontig_0007225574LIC_RS12375 1597317085 EMBL GBK
LIC_RS12330 2463326495
LIC_RS12325 2658529359
LIC_RS12300 3460536026
LIC_RS05500 3977140787
LIC_RS05530 4648647652
LIC_RS05535 4773648059
LIC_RS05555 5146853402
LIC_RS11625 8272183389
LIC_RS11595 8701388149
LIC_RS11590 8816590447
LIC_RS05750 125990126838
LIC_RS06005 148322149065
LIC_RS06015 150295150801
LIC_RS06140 157042158034
LIC_RS06705 170986172245
LIC_RS06740 176947177414
LIC_RS06745 177561178679
LIC_RS06815 212543213031
LIC_RS06825 215357216244
LIC_RS06850 220072221709
LIC_RS06855 221723222013
351014Illuminacontig_0008216630LIC_RS18205 2148323312 EMBL GBK
LIC_RS18185 2671727655
LIC_RS18170 2937630404
LIC_RS18080 4281543522
LIC_RS18075 4351544432
LIC_RS18045 4928850637
LIC_RS18040 5063451656
LIC_RS18025 5324954580
LIC_RS18020 5457755530
LIC_RS19435 6520266053
LIC_RS19420 6841169424
LIC_RS19385 7842079469
LIC_RS19375 8149482960
LIC_RS19340 8474685024
LIC_RS19305 8609486819
LIC_RS19290 8789488841
LIC_RS19220 115149115991
LIC_RS18565 154941155486
LIC_RS18695 163573165471
LIC_RS18700 165464165940
LIC_RS18705 165937167547
LIC_RS18710 167941168828
LIC_RS18835 195317196732
BACT000062 (rpmG) 208796208960
351043Illuminacontig_000995901LIC_RS05190 56766158 EMBL GBK
LIC_RS05185 61557279
LIC_RS05225 1063212656
LIC_RS05230 1266914477
LIC_RS05300 2516625507
LIC_RS05355 3812039226
LIC_RS05360 3926340567
LIC_RS12770 7508875861
350996Illuminacontig_001085472LIC_RS18410 3006831378 EMBL GBK
LIC_RS18435 3756538860
LIC_RS18440 3905740805
LIC_RS18445 4095941867
LIC_RS18490 5460355142
LIC_RS18495 5513955990
LIC_RS18505 5669657922
LIC_RS19065 7493075982
LIC_RS19060 7599778195
351045 Illumina contig_0011 81675
351010 Illumina contig_0012 69244
351035Illuminacontig_001366022LIC_RS04720 6176462723 EMBL GBK
351042 Illumina contig_0014 61761
350986 Illumina contig_0015 52024
351028Illuminacontig_001650186LIC_RS11500 52866884 EMBL GBK
LIC_RS11495 68868703
LIC_RS11470 1199312241
LIC_RS11460 1311914180
LIC_RS11445 1515615620
LIC_RS11320 2652728548
LIC_RS11310 2890829924
351024 Illumina contig_0017 22067
351022 Illumina contig_0018 21743
351030 Illumina contig_0019 14496
351001 Illumina contig_0020 12035
351005 Illumina contig_0021 10713
350988 Illumina contig_0022 10403
350990 Illumina contig_0023 9507
351004 Illumina contig_0024 8138
351019 Illumina contig_0025 7903
350998 Illumina contig_0026 7197
351032 Illumina contig_0027 5968
350999 Illumina contig_0028 5674
351000 Illumina contig_0029 5366
350981 Illumina contig_0030 5047
351021 Illumina contig_0031 4341
351033 Illumina contig_0032 4154
351039 Illumina contig_0033 3793
351012 Illumina contig_0036 3552
351038 Illumina contig_0037 3543
350994 Illumina contig_0038 3455
351016 Illumina contig_0039 3315
351041 Illumina contig_0040 2871
351006 Illumina contig_0041 2503
351008 Illumina contig_0042 2470
351018 Illumina contig_0043 2456
350997 Illumina contig_0044 2314
351034 Illumina contig_0034 2261
350993 Illumina contig_0045 2125
350992 Illumina contig_0046 1679
351031 Illumina contig_0047 1513
351023 Illumina contig_0035 1399
351002 Illumina contig_0048 1395
350982 Illumina contig_0049 1386
351011 Illumina contig_0050 1200
351003 Illumina contig_0051 1187
351027 Illumina contig_0052 1175
351015 Illumina contig_0053 1076
350989 Illumina contig_0054 979
350984 Illumina contig_0055 924
351020 Illumina contig_0056 870
350985 Illumina contig_0057 810
351029 Illumina contig_0058 806
351040 Illumina contig_0059 776
351037 Illumina contig_0060 752
350979 Illumina contig_0061 751
351007 Illumina contig_0062 743
351026 Illumina contig_0063 716
351046 Illumina contig_0064 670
351036 Illumina contig_0065 652
350991 Illumina contig_0066 641
351017 Illumina contig_0067 396
350983 Illumina contig_0068 381