Sequence bin for PLW-D32

Contig summary statistics

Contigs
67
Total length
4,592,664
Minimum length
501
Maximum length
350,244
Mean length
68,548
N50
136,571
L50
11
N90
40,510
L90
36
N95
26,916
L95
43

FASTAEMBLGBKGFF3

SequenceSequencing methodOriginal designationLengthCommentsLocusStartEndDirectionAnnotation
347930Illuminasequence01350244LIC_RS18075 29783895 EMBL GBK
LIC_RS18080 38884595
LIC_RS18115 922610494
LIC_RS18170 2021821201
LIC_RS18185 2290123839
LIC_RS18205 2720229025
LIC_RS18310 5279953563
LIC_RS18315 5405654289
LIC_RS18330 5604757132
LIC_RS18335 5713258013
LIC_RS18410 7562776937
LIC_RS18435 8292584220
LIC_RS18440 8441986164
LIC_RS18445 8634287217
LIC_RS18490 9808498623
LIC_RS18495 9862099471
LIC_RS18505 100155101381
LIC_RS18565 118010118561
LIC_RS18695 146105147994
LIC_RS18700 147987148457
LIC_RS18705 148454150064
LIC_RS18710 150506151393
LIC_RS18835 181135182547
LIC_RS19060 249959252157
LIC_RS19065 252170253225
LIC_RS19220 283067283909
LIC_RS19290 300624301598
LIC_RS19305 303117303842
LIC_RS19340 308112308390
LIC_RS19375 313798315258
LIC_RS19385 317271318320
LIC_RS19420 326726327736
LIC_RS19435 330089330934
LIC_RS18020 341152342105
LIC_RS18025 342102343433
LIC_RS18040 345029346051
LIC_RS18045 346048347397
347871Illuminasequence02253758LIC_RS05845 1790218810 EMBL GBK
LIC_RS05850 1881319628
LIC_RS05855 1963020739
LIC_RS05875 2452726467
LIC_RS05880 2658427222
LIC_RS05885 2721928598
LIC_RS06005 5402054763
LIC_RS06015 5596856480
LIC_RS06110 8118782581
LIC_RS06115 8281684798
LIC_RS06140 8871989711
LIC_RS06340 144372145181
LIC_RS06370 149156149455
LIC_RS06375 149459149980
LIC_RS06385 150535152046
LIC_RS06390 152061152921
LIC_RS06395 152939154342
LIC_RS06470 171340172902
LIC_RS06475 173094174116
LIC_RS06480 174190175287
LIC_RS06485 175284175796
LIC_RS06490 175798177741
LIC_RS06510 181987182214
LIC_RS06535 189009190298
LIC_RS06550 191910192791
LIC_RS06555 192936194045
LIC_RS06700 228554229228
LIC_RS06705 229312230562
LIC_RS06740 236490236957
LIC_RS06745 237065238222
347905Illuminasequence03242940LIC_RS13515 2662326811 EMBL GBK
LIC_RS13510 2680827599
LIC_RS13500 2788229330
LIC_RS13470 4154142389
LIC_RS13425 5048651604
LIC_RS13420 5166052070
LIC_RS13405 5581457082
LIC_RS13265 8572686982
LIC_RS13210 9736798215
LIC_RS13195 99964101541
LIC_RS13190 101828102703
LIC_RS13185 102716103888
LIC_RS13170 106439107788
LIC_RS13145 112200113477
LIC_RS13135 114856116865
LIC_RS13025 140398141513
LIC_RS13020 141522142835
LIC_RS13015 142832143578
LIC_RS13010 143553144563
LIC_RS12995 145699147627
LIC_RS12990 147632148570
LIC_RS12980 149955150557
LIC_RS12945 158668159513
LIC_RS12935 160351161421
LIC_RS12770 202350203123
LIC_RS12680 219347220165
LIC_RS12675 220272221228
LIC_RS12665 223751225016
LIC_RS12660 225030226433
347906Illuminasequence04228147LIC_RS02365 1198912768 EMBL GBK
LIC_RS02350 1564016431
LIC_RS02325 1906120443
LIC_RS02315 2228423330
LIC_RS02310 2334724957
LIC_RS02255 3620738174
LIC_RS02250 3833438897
LIC_RS02240 3960040538
LIC_RS02120 6746469530
LIC_RS02115 6952369939
LIC_RS02110 6994070395
LIC_RS02035 8231082645
LIC_RS02030 8314985089
LIC_RS02025 8516185331
LIC_RS01870 120687121448
LIC_RS01865 121460122419
LIC_RS01860 122544123137
LIC_RS01855 123143124963
LIC_RS01850 124960125928
LIC_RS01760 143673146213
LIC_RS01745 147753149066
LIC_RS01690 159531160667
LIC_RS01680 161341162312
LIC_RS01660 166066166254
LIC_RS01645 168615169052
LIC_RS01635 170138171265
LIC_RS01610 176301176693
LIC_RS01605 176733179627
LIC_RS01555 188388188819
LIC_RS01550 188885189346
LIC_RS01545 189349189732
LIC_RS01500 197283198683
LIC_RS01495 198686198970
lfb1 210854211131
LIC_RS01435 211367212137
LIC_RS01395 219249221369
LIC_RS01380 223563224618
LIC_RS01375 224618225283
347884Illuminasequence05216572LIC_RS17185 16352285 EMBL GBK
LIC_RS17180 22823010
LIC_RS17115 1665017063
LIC_RS17110 1707317555
LIC_RS17070 3329634225
LIC_RS17065 3423034958
LIC_RS17045 3867440071
LIC_RS16980 4907450339
LIC_RS16975 5035551665
LIC_RS16895 7058271553
LIC_RS16830 8733188488
LIC_RS16825 8855789948
LIC_RS16800 9332493719
LIC_RS16785 9632197487
LIC_RS16780 9752999001
LIC_RS16570 144759147605
LIC_RS16565 147684150110
LIC_RS16515 159119160456
LIC_RS16505 160830161498
LIC_RS16350 207181207468
LIC_RS16320 214193215518
347910Illuminasequence06206015LIC_RS11500 2901888 EMBL GBK
LIC_RS11495 18903713
LIC_RS11470 71607417
LIC_RS11460 82899350
LIC_RS11445 1032110785
LIC_RS11320 4053742558
LIC_RS11310 4292143931
LIC_RS10785 162594163046
LIC_RS10770 163846165174
LIC_RS10765 165207167012
LIC_RS10755 168008170422
LIC_RS10710 178666179658
LIC_RS10705 179658180791
LIC_RS10675 185235186425
LIC_RS10670 186429187436
LIC_RS10595 204286204636
LIC_RS10590 204648205181
347917Illuminasequence07198817LIC_RS15540 1940421929 EMBL GBK
LIC_RS15535 2248623172
LIC_RS15510 3097531991
LIC_RS15280 9381295041
LIC_RS15275 9506096262
LIC_RS15250 99781100755
LIC_RS15220 109380110930
LIC_RS15215 111908112189
LIC_RS15200 114319114780
LIC_RS15195 114783115676
LIC_RS15130 129428129889
LIC_RS15120 130610132610
347921Illuminasequence08191713LIC_RS02715 2013420682 EMBL GBK
LIC_RS02720 2070621674
LIC_RS02725 2196023078
LIC_RS02730 2337925319
LIC_RS02740 2600627034
LIC_RS02770 3623238112
LIC_RS02780 3964942057
LIC_RS03010 9674698641
LIC_RS03035 103082105835
LIC_RS03110 125451125867
LIC_RS03210 151681151905
LIC_RS03215 151911152693
LIC_RS03220 152709153536
LIC_RS03225 153577154101
LIC_RS03230 154101154844
LIC_RS03235 155787156125
LIC_RS03270 164042164353
LIC_RS03275 164359165600
347868Illuminasequence09178656LIC_RS09305 44124999 EMBL GBK
LIC_RS09290 73898786
LIC_RS09280 944210443
LIC_RS09250 1575916094
LIC_RS09245 1609118331
LIC_RS09230 2162522656
LIC_RS09225 2265322895
LIC_RS09215 2321223463
LIC_RS09205 2564926422
LIC_RS09200 2641927336
LIC_RS09175 3121332703
LIC_RS09150 3621037631
LIC_RS09145 3766738653
LIC_RS09135 4070742416
LIC_RS09130 4246843682
LIC_RS09105 4859349234
LIC_RS09090 5088051860
LIC_RS09070 5501256067
LIC_RS09065 5644056616
LIC_RS09030 6292363330
LIC_RS09025 6334764423
LIC_RS09020 6444065660
LIC_RS08940 8419885508
LIC_RS08935 8594687007
LIC_RS08930 8700487648
LIC_RS08760 133929136775
LIC_RS08735 140331141722
LIC_RS08685 153355153801
LIC_RS08675 155633157390
LIC_RS08660 159705160922
347923Illuminasequence10167206LIC_RS12560 44744968 EMBL GBK
LIC_RS12555 49688180
LIC_RS12550 81869259
LIC_RS12545 92619623
LIC_RS12540 964110426
LIC_RS12530 1094912040
LIC_RS12500 1744218059
LIC_RS12485 1856219569
LIC_RS12375 3847839578
LIC_RS12330 5356755396
LIC_RS12325 5548758261
LIC_RS12300 6154162962
LIC_RS12250 7643878276
LIC_RS12210 8649387041
347886Illuminasequence11136571LIC_RS00525 62957359 EMBL GBK
LIC_RS00385 3480535509
LIC_RS00380 3551636361
LIC_RS00355 4101841386
LIC_RS00340 4341644198
LIC_RS00335 4419944720
LIC_RS00260 6566166503
LIC_RS00245 6982571144
LIC_RS00205 7906280030
LIC_RS00160 8944991425
LIC_RS00150 9296893816
LIC_RS00095 105962106705
LIC_RS00035 116942117931
LIC_RS00030 117936120440
LIC_RS00025 120459122378
LIC_RS17970 130175131098
LIC_RS17965 131242133149
347931Illuminasequence12123613LIC_RS01210 3167432351 EMBL GBK
LIC_RS01205 3235333726
LIC_RS01160 4279043689
LIC_RS01150 4466448185
LIC_RS01095 6140763011
LIC_RS01090 6302264023
LIC_RS01070 6626767136
LIC_RS01005 7865679594
LIC_RS00815 111679113049
LIC_RS00810 113042113752
347872Illuminasequence13109581LIC_RS14425 1810619023 EMBL GBK
LIC_RS14430 1899820023
LIC_RS14485 2726627706
LIC_RS14490 2782628593
LIC_RS14520 3560236891
LIC_RS14530 3852739474
LIC_RS14570 4642747353
LIC_RS14615 5831859295
secY 6166163043
LIC_RS14735 6949370332
LIC_RS14760 7225673461
347898Illuminasequence14108788LIC_RS05355 35294626 EMBL GBK
LIC_RS05360 46675971
LIC_RS05500 4153942555
LIC_RS05505 4260944072
LIC_RS05530 4971450880
LIC_RS05535 5095751280
LIC_RS05555 5465456582
LIC_RS05725 99348100262
LIC_RS05750 104166105014
347918Illuminasequence1597081LIC_RS04540 73208543 EMBL GBK
LIC_RS04530 91459696
LIC_RS04525 969611069
LIC_RS04520 1108914196
LIC_RS13880 2773529117
LIC_RS13855 3338535481
LIC_RS13760 6721068145
LIC_RS13755 6814268903
347922Illuminasequence1696496LIC_RS09590 34374288 EMBL GBK
LIC_RS09600 49166178
LIC_RS09605 62447482
LIC_RS09675 2079621770
LIC_RS09685 2317424193
LIC_RS09785 4076041542
LIC_RS09790 4154343069
LIC_RS09905 7520976615
LIC_RS09920 7770280434
LIC_RS09925 8053981288
LIC_RS09940 8267083227
LIC_RS09945 8323884248
LIC_RS09955 8464285235
347916Illuminasequence1792517LIC_RS13970 1063711923 EMBL GBK
LIC_RS13975 1255713084
LIC_RS13980 1308413884
LIC_RS14070 3515335713
LIC_RS14075 3571036246
LIC_RS14080 3624837465
LIC_RS14085 3746537944
LIC_RS14090 3796039291
LIC_RS14095 3928840328
LIC_RS14110 4136543314
LIC_RS14115 4331645004
LIC_RS14120 4500146539
LIC_RS14230 7358674836
LIC_RS14300 8819088948
LIC_RS14305 8895589287
347869Illuminasequence1892289LIC_RS08500 1928220427 EMBL GBK
LIC_RS08470 2314423596
LIC_RS08465 2401024636
LIC_RS08460 2464026175
LIC_RS08445 2774628390
LIC_RS08405 3578536951
LIC_RS08345 4902451069
LIC_RS08305 6114461593
LIC_RS08300 6159662201
LIC_RS08280 6547766247
LIC_RS08270 6675167722
LIC_RS08265 6773769494
LIC_RS08230 7697077659
LIC_RS08225 7770678749
LIC_RS08220 7875179629
LIC_RS08210 7995480784
LIC_RS08190 8629586837
LIC_RS08180 8797988551
LIC_RS08175 8853990089
347913Illuminasequence1991376LIC_RS17510 45186482 EMBL GBK
LIC_RS17735 5634856602
LIC_RS17740 5660257054
LIC_RS17745 5709658364
LIC_RS17750 5840160311
LIC_RS17790 6706867397
LIC_RS17860 7915280657
LIC_RS17865 8066281009
LIC_RS17870 8095781595
LIC_RS17875 8198583559
LIC_RS17880 8356384411
LIC_RS17890 8686488117
LIC_RS17895 8811088919
LIC_RS17900 8904090059
LIC_RS17905 9005990406
347911Illuminasequence2090466LIC_RS08150 17702900 EMBL GBK
LIC_RS08145 29044172
LIC_RS08090 1422014747
LIC_RS08060 1947819954
LIC_RS08055 1997621202
LIC_RS08050 2120822881
LIC_RS08045 2288524732
LIC_RS08040 2468025588
LIC_RS07985 3339634091
LIC_RS07965 3587336520
LIC_RS07940 4136742713
LIC_RS07935 4272144511
LIC_RS07930 4452544788
LIC_RS07925 4476045725
LIC_RS07920 4573047151
LIC_RS07915 4714847873
LIC_RS07900 4984950712
LIC_RS07895 5071552331
LIC_RS07890 5253053006
LIC_RS07865 5758858139
LIC_RS07855 5847759328
LIC_RS07825 6696867330
LIC_RS07805 7283473349
LIC_RS07795 7384374886
LIC_RS07780 7571078454
LIC_RS07775 7846180113
LIC_RS07760 8334983657
LIC_RS07745 8463085166
347927Illuminasequence2187500LIC_RS03500 28063939 EMBL GBK
LIC_RS03505 39364793
LIC_RS03510 47695017
LIC_RS03515 50145673
LIC_RS03700 5269254116
LIC_RS03705 5412756265
LIC_RS03820 8168382774
347882Illuminasequence2286371LIC_RS10065 40884660 EMBL GBK
LIC_RS10090 87329862
LIC_RS10095 988012039
LIC_RS10100 1206212376
LIC_RS10215 3865639336
LIC_RS10220 3935541268
LIC_RS10265 4733449136
LIC_RS10315 6052562501
LIC_RS10345 6980671113
LIC_RS10350 7119572049
LIC_RS10355 7206573030
LIC_RS10360 7302774442
LIC_RS10365 7453275194
347874Illuminasequence2371929LIC_RS07180 811710222 EMBL GBK
LIC_RS07190 1045111743
LIC_RS07195 1191513918
LIC_RS07200 1425914528
LIC_RS07210 1771218821
LIC_RS07215 1925120960
LIC_RS07220 2095721442
LIC_RS07240 2480026542
LIC_RS07260 2875729353
LIC_RS07265 2936430626
347888Illuminasequence2464861LIC_RS15925 3862639378 EMBL GBK
LIC_RS15980 5279154128
347875Illuminasequence2558401LIC_RS16230 28903669 EMBL GBK
LIC_RS16225 36664637
LIC_RS16195 1064711648
LIC_RS16175 1639317727
LIC_RS16170 1774318285
347929Illuminasequence2653677LIC_RS02455 74428722 EMBL GBK
LIC_RS02460 871211360
LIC_RS02515 2346824817
LIC_RS02520 2532226047
347914Illuminasequence2750978LIC_RS11625 1829618964 EMBL GBK
LIC_RS11595 2421525342
LIC_RS11590 2535927641
347890Illuminasequence2849816LIC_RS09350 46224912 EMBL GBK
LIC_RS09365 71428167
LIC_RS09380 1033611211
LIC_RS09385 1120812620
LIC_RS09400 1369614643
LIC_RS09405 1464515577
LIC_RS09415 1668717973
LIC_RS09420 1810118931
LIC_RS09450 2477125388
LIC_RS09460 2640427858
LIC_RS09465 2785528634
LIC_RS09470 2863829405
LIC_RS09475 2943530184
LIC_RS09535 4199742869
LIC_RS09545 4333044079
347909Illuminasequence2946994LIC_RS00725 48326280 EMBL GBK
LIC_RS00655 2381324751
LIC_RS00625 3389734853
LIC_RS00585 4475745482
LIC_RS00580 4547946111
LIC_RS00575 4610846728
347899Illuminasequence3045290LIC_RS11825 2429324643 EMBL GBK
LIC_RS11815 2553326198
LIC_RS11805 2683428393
LIC_RS11785 3166432845
LIC_RS11780 3289833509
LIC_RS11770 3382835216
LIC_RS11765 3522136237
LIC_RS11760 3623436998
x_2 4341644726
347877Illuminasequence3142548x_1 65398530 EMBL GBK
347889Illuminasequence3242163LIC_RS04450 90219497 EMBL GBK
LIC_RS04445 953111435
LIC_RS04440 1146813780
LIC_RS04430 1444415238
LIC_RS04425 1523516428
LIC_RS04420 1643118161
LIC_RS04415 1816719894
LIC_RS04410 1988821057
LIC_RS04405 2106421972
LIC_RS04400 2196522690
LIC_RS04395 2269223246
LIC_RS04385 2398624585
LIC_RS04375 2548525745
LIC_RS04370 2576826145
LIC_RS04365 2615426375
LIC_RS04360 2637926759
LIC_RS04350 2781428635
LIC_RS04345 2864829460
LIC_RS04340 2946430387
347880Illuminasequence3342004LIC_RS05190 49215403 EMBL GBK
LIC_RS05185 54006524
LIC_RS05180 65956930
347900Illuminasequence3441709LIC_RS04720 1414515104 EMBL GBK
LIC_RS04605 3931139730
LIC_RS04600 3973340143
347881Illuminasequence3540954LIC_RS07095 8141095 EMBL GBK
LIC_RS07080 25554540
LIC_RS07075 45665366
LIC_RS07060 69168196
LIC_RS07055 824910366
LIC_RS07045 1231313092
LIC_RS07040 1309913362
LIC_RS07035 1335914162
LIC_RS07025 1501316077
LIC_RS07020 1664516971
LIC_RS06950 3410335341
347896Illuminasequence3640510LIC_RS07580 68017697 EMBL GBK
LIC_RS07640 1883819590
LIC_RS07680 2955429748
LIC_RS07685 2975530513
347925Illuminasequence3740435LIC_RS03990 1132612153 EMBL GBK
LIC_RS03980 1382815456
LIC_RS03960 1834118832
LIC_RS03955 1882921762
LIC_RS03900 2846932683
LIC_RS03870 3873839283
347915Illuminasequence3838711LIC_RS05225 13373379 EMBL GBK
LIC_RS05230 33485192
LIC_RS05300 2393524276
347883Illuminasequence3938184LIC_RS17350 15012241 EMBL GBK
LIC_RS17345 22383155
LIC_RS17340 31554405
LIC_RS17230 3023032365
LIC_RS17225 3236233750
LIC_RS17210 3486536430
347867 Illumina sequence40 32000
347891Illuminasequence4131265LIC_RS07490 1506615836 EMBL GBK
LIC_RS07485 1583317296
LIC_RS07480 1729317583
LIC_RS07475 1761019025
LIC_RS07470 1902822003
LIC_RS07455 2363927199
LIC_RS07450 2719628053
LIC_RS07445 2808429367
347879 Illumina sequence42 29828
347912Illuminasequence4326916LIC_RS17405 37724782 EMBL GBK
LIC_RS17410 47795822
LIC_RS17415 58196820
LIC_RS17420 68177770
LIC_RS17445 1310713343
347873Illuminasequence4426688LIC_RS06815 41094582 EMBL GBK
LIC_RS06825 74318318
LIC_RS06850 1202813668
LIC_RS06855 1368313973
347870Illuminasequence4521164LIC_RS04060 13382057 EMBL GBK
LIC_RS04065 20813028
LIC_RS04070 32256005
LIC_RS04145 1849319533
347894 Illumina sequence46 19922
347892 Illumina sequence47 18772
347876 Illumina sequence48 18405
347920 Illumina sequence49 17514
347904 Illumina sequence50 17360
347907 Illumina sequence51 15876
347887Illuminasequence5211023LIC_RS07125 60227386 EMBL GBK
LIC_RS07115 81158762
347901Illuminasequence5310192LIC_RS16285 27373594 EMBL GBK
347878 Illumina sequence54 8649
347866Illuminasequence557322LIC_RS17930 16102485 EMBL GBK
LIC_RS17935 24883249
347919 Illumina sequence56 4073
347928 Illumina sequence57 3530
347924 Illumina sequence58 3325
347895 Illumina sequence59 3119
347893 Illumina sequence60 2795
347932 Illumina sequence61 2719
347908 Illumina sequence62 1564
347897 Illumina sequence63 669
347902 Illumina sequence64 582
347926 Illumina sequence66 505
347885 Illumina sequence65 505
347903 Illumina sequence67 501