Sequence bin for 1530d

Contig summary statistics

Contigs
9
Total length
5,013,967
Minimum length
2,169
Maximum length
4,318,326
Mean length
557,108
N50
4,318,326
L50
1
N90
349,777
L90
2
N95
82,644
L95
4

FASTAEMBLGBKGFF3

SequenceSequencing methodOriginal designationLengthCommentsLocusStartEndDirectionAnnotation
342900otherNZ_VWNG01000009.14318326Leptospira interrogans serovar Yeoncheon strain 1530d unitig_0, whole genome shotgun sequenceLIC_RS12210 4928149829 EMBL GBK
LIC_RS12250 5832360161
LIC_RS12300 7224973670
LIC_RS12325 7694979723
LIC_RS12330 7981481643
LIC_RS12375 9562096720
LIC_RS12485 117178118185
LIC_RS12500 118688119305
LIC_RS12530 124707125798
LIC_RS12540 126321127106
LIC_RS12545 127124127486
LIC_RS12550 127488128561
LIC_RS12555 128567131779
LIC_RS12560 131779132273
LIC_RS12660 152921154324
LIC_RS12665 154338155597
LIC_RS12675 158120159076
LIC_RS12680 159183160001
LIC_RS12770 175992176765
LIC_RS12935 217555218625
LIC_RS12945 219463220308
LIC_RS12980 228307228909
LIC_RS12990 230294231232
LIC_RS12995 231237233165
LIC_RS13010 234301235311
LIC_RS13015 235286236032
LIC_RS13020 236029237342
LIC_RS13025 237351238466
LIC_RS13135 262643264652
LIC_RS13145 266031267308
LIC_RS13170 271587272936
LIC_RS13185 275536276708
LIC_RS13190 276721277596
LIC_RS13195 277883279460
LIC_RS13210 281209282057
LIC_RS13265 292442293698
LIC_RS13405 322421323689
LIC_RS13420 327433327843
LIC_RS13425 327897329015
LIC_RS13470 335827336675
LIC_RS13500 349009350457
LIC_RS13510 350740351531
LIC_RS13515 351528351716
LIC_RS13755 404726405487
LIC_RS13760 405484406419
LIC_RS13855 438178440274
LIC_RS13880 444464445846
LIC_RS13970 466077467363
LIC_RS13975 467999468526
LIC_RS13980 468526469326
LIC_RS14070 490596491156
LIC_RS14075 491153491689
LIC_RS14080 491691492908
LIC_RS14085 492908493387
LIC_RS14090 493403494734
LIC_RS14095 494731495771
LIC_RS14110 496808498757
LIC_RS14115 498759500447
LIC_RS14120 500444501982
LIC_RS14230 529090530340
LIC_RS14300 542366543124
LIC_RS14305 543131543463
LIC_RS14425 566375567292
LIC_RS14430 567267568292
LIC_RS14485 575548575988
LIC_RS14490 576108576875
LIC_RS14520 583882585171
LIC_RS14530 586807587754
LIC_RS14570 594697595623
LIC_RS14615 606438607415
secY 609781611166
LIC_RS14735 617616618455
LIC_RS14760 620378621583
LIC_RS15120 724178726178
LIC_RS15130 726899727360
LIC_RS15195 741288742181
LIC_RS15200 742184742645
LIC_RS15215 744775745056
LIC_RS15220 746046747596
LIC_RS15250 757009757983
LIC_RS15275 761613762815
LIC_RS15280 762834764063
LIC_RS15510 826082827098
LIC_RS15535 834890835576
LIC_RS15540 836133838658
LIC_RS15925 937407938159
LIC_RS15980 951588952925
LIC_RS16170 10035701004112
LIC_RS16175 10041281005462
LIC_RS16195 10102071011208
LIC_RS16225 10172221018193
LIC_RS16230 10181901018969
LIC_RS16285 10242771025134
LIC_RS16320 10329261034251
LIC_RS16350 10409751041262
LIC_RS16505 10880931088761
LIC_RS16515 10891351090472
LIC_RS16565 11007341103160
LIC_RS16570 11032391106085
LIC_RS16780 11524451153917
LIC_RS16785 11539591155125
LIC_RS16800 11577271158122
LIC_RS16825 11614961162887
LIC_RS16830 11629561164113
LIC_RS16895 11798811180852
LIC_RS16975 11998291201139
LIC_RS16980 12011551202420
LIC_RS17045 12112501212647
LIC_RS17065 12163631217091
LIC_RS17070 12170961218025
LIC_RS17110 12368601237342
LIC_RS17115 12373521237765
LIC_RS17180 12514341252162
LIC_RS17185 12521191252809
LIC_RS17210 12565111258076
LIC_RS17225 12591911260579
LIC_RS17230 12605761262711
LIC_RS17340 12886461289896
LIC_RS17345 12898961290813
LIC_RS17350 12908101291550
LIC_RS17405 12990171300027
LIC_RS17410 13000241301067
LIC_RS17415 13010641302065
LIC_RS17420 13020621303015
LIC_RS17445 13083521308588
LIC_RS17510 13263201328284
LIC_RS17735 13794721379726
LIC_RS17740 13797261380178
LIC_RS17745 13802201381488
LIC_RS17750 13815261383436
LIC_RS17790 13901941390523
LIC_RS17860 14024751403980
LIC_RS17865 14039851404332
LIC_RS17870 14042801404918
LIC_RS17875 14053071406881
LIC_RS17880 14068851407733
LIC_RS17890 14102881411541
LIC_RS17895 14115341412343
LIC_RS17900 14124641413483
LIC_RS17905 14134831413830
LIC_RS17930 14161961417071
LIC_RS17935 14170741417835
LIC_RS17965 14248711426778
LIC_RS17970 14269221427845
LIC_RS00025 14356281437547
LIC_RS00030 14375661440070
LIC_RS00035 14400751441064
LIC_RS00095 14512991452042
LIC_RS00150 14641911465039
LIC_RS00160 14665791468555
LIC_RS00205 14779691478937
LIC_RS00245 14868561488175
LIC_RS00260 14914971492339
LIC_RS00335 15132761513797
LIC_RS00340 15137981514580
LIC_RS00355 15166091516977
LIC_RS00380 15216341522479
LIC_RS00385 15224861523190
LIC_RS00525 15506291551693
LIC_RS00575 15585421559162
LIC_RS00580 15591591559822
LIC_RS00585 15597881560513
LIC_RS00625 15704101571366
LIC_RS00655 15805051581443
LIC_RS00725 15991691600617
LIC_RS00810 16148061615516
LIC_RS00815 16155091616879
LIC_RS01005 16489601649898
LIC_RS01070 16614161662285
LIC_RS01090 16645261665527
LIC_RS01095 16655381667142
LIC_RS01150 16803991683920
LIC_RS01160 16849521685851
LIC_RS01205 16962901697663
LIC_RS01210 16976651698342
LIC_RS01375 17336481734313
LIC_RS01380 17343131735368
LIC_RS01395 17375621739682
LIC_RS01435 17467931747563
lfb1 17477991748076
LIC_RS01495 17599611760245
LIC_RS01500 17602481761648
LIC_RS01545 17691561769539
LIC_RS01550 17695421770003
LIC_RS01555 17700691770500
LIC_RS01605 17789961781890
LIC_RS01610 17819301782322
LIC_RS01635 17873581788485
LIC_RS01645 17895711790008
LIC_RS01660 17923691792557
LIC_RS01680 17963111797282
LIC_RS01690 17979571799093
LIC_RS01745 18094591810772
LIC_RS01760 18123121814852
LIC_RS01850 18325691833537
LIC_RS01855 18335341835354
LIC_RS01860 18353601835953
LIC_RS01865 18360781837037
LIC_RS01870 18370491837810
LIC_RS02025 18733681873538
LIC_RS02030 18736101875550
LIC_RS02035 18760541876389
LIC_RS02110 18861881886643
LIC_RS02115 18866441887060
LIC_RS02120 18870531889119
LIC_RS02240 19160611916999
LIC_RS02250 19177021918265
LIC_RS02255 19184251920392
LIC_RS02310 19313421932952
LIC_RS02315 19329691934015
LIC_RS02325 19358561937238
LIC_RS02350 19398691940660
LIC_RS02365 19435261944305
LIC_RS02455 19706471971927
LIC_RS02460 19719171974565
LIC_RS02515 19865681987917
LIC_RS02520 19884271989152
LIC_RS02715 20373052037853
LIC_RS02720 20378772038845
LIC_RS02725 20391302040248
LIC_RS02730 20405412042481
LIC_RS02740 20431682044196
LIC_RS02770 20533672055247
LIC_RS02780 20567842059192
LIC_RS03010 21141112116019
LIC_RS03035 21204482123201
LIC_RS03110 21432482143664
LIC_RS03210 21693112169535
LIC_RS03215 21695412170323
LIC_RS03220 21703392171166
LIC_RS03225 21712072171731
LIC_RS03230 21717312172474
LIC_RS03235 21734092173747
LIC_RS03270 21816792181990
LIC_RS03275 21819962183237
LIC_RS03500 22349252236058
LIC_RS03505 22360552236912
LIC_RS03510 22368882237136
LIC_RS03515 22371332237792
LIC_RS03700 22862522287676
LIC_RS03705 22876872289825
LIC_RS03820 23153492316440
LIC_RS03870 23237452324290
LIC_RS03900 23303452334559
LIC_RS03955 23413672344300
LIC_RS03960 23442972344788
LIC_RS03980 23476732349301
LIC_RS03990 23509762351803
LIC_RS04060 23691022369821
LIC_RS04065 23698452370792
LIC_RS04070 23709892373769
LIC_RS04145 23863402387380
LIC_RS04340 24395062440429
LIC_RS04345 24404332441245
LIC_RS04350 24412582442079
LIC_RS04360 24431342443521
LIC_RS04365 24435182443739
LIC_RS04370 24437482444125
LIC_RS04375 24441482444408
LIC_RS04385 24453082445907
LIC_RS04395 24466472447201
LIC_RS04400 24472032447928
LIC_RS04405 24479212448829
LIC_RS04410 24488362450005
LIC_RS04415 24499992451726
LIC_RS04420 24517322453462
LIC_RS04425 24534652454658
LIC_RS04430 24546552455449
LIC_RS04440 24561132458425
LIC_RS04445 24584582460362
LIC_RS04450 24603962460872
LIC_RS04520 24740582477165
LIC_RS04525 24771852478558
LIC_RS04530 24785582479109
LIC_RS04540 24797112480934
LIC_RS04600 24891372489547
LIC_RS04605 24895502489969
LIC_RS04720 25146282515587
x_1 25737282575719
LIC_RS05180 26455762645911
LIC_RS05185 26459822647106
LIC_RS05190 26471032647585
LIC_RS05225 26610132663055
LIC_RS05230 26630242664868
LIC_RS05300 26836132683954
LIC_RS05355 27010362702133
LIC_RS05360 27021742703478
LIC_RS05500 27402642741280
LIC_RS05505 27413342742797
LIC_RS05530 27487082749874
LIC_RS05535 27499512750274
LIC_RS05555 27535122755440
LIC_RS05725 27982272799141
LIC_RS05750 28030452803893
LIC_RS05845 28254942826402
LIC_RS05850 28264052827220
LIC_RS05855 28272222828331
LIC_RS05875 28314532833393
LIC_RS05880 28335102834148
LIC_RS05885 28341452835524
LIC_RS06005 28614472862190
LIC_RS06015 28633952863907
LIC_RS06110 28905012891895
LIC_RS06115 28921302894112
LIC_RS06140 28980702899062
LIC_RS06340 29541632954972
LIC_RS06370 29589462959245
LIC_RS06375 29592492959770
LIC_RS06385 29603252961836
LIC_RS06390 29618512962711
LIC_RS06395 29627292964132
LIC_RS06470 29804672982029
LIC_RS06475 29822212983243
LIC_RS06480 29833172984414
LIC_RS06485 29844112984923
LIC_RS06490 29849252986868
LIC_RS06510 29911112991338
LIC_RS06535 29979432999232
LIC_RS06550 30008443001725
LIC_RS06555 30018703002979
LIC_RS06700 30378563038530
LIC_RS06705 30386143039864
LIC_RS06740 30458643046331
LIC_RS06745 30464393047596
LIC_RS06815 30668903067363
LIC_RS06825 30702123071099
LIC_RS06850 30748143076454
LIC_RS06855 30764693076759
LIC_RS06950 30944443095682
LIC_RS07020 31128313113157
LIC_RS07025 31137253114789
LIC_RS07035 31156403116443
LIC_RS07040 31164403116703
LIC_RS07045 31167103117489
LIC_RS07055 31194363121553
LIC_RS07060 31216063122886
LIC_RS07075 31244363125236
LIC_RS07080 31252623127247
LIC_RS07095 31287073128988
LIC_RS07115 31322283132875
LIC_RS07125 31336043134968
LIC_RS07180 31495223151627
LIC_RS07190 31518563153148
LIC_RS07195 31533203155323
LIC_RS07200 31556643155933
LIC_RS07210 31591033160212
LIC_RS07215 31606423162351
LIC_RS07220 31623483162833
LIC_RS07240 31663393168081
LIC_RS07260 31702963170892
LIC_RS07265 31709033172165
LIC_RS07445 32171203218403
LIC_RS07450 32184343219291
LIC_RS07455 32192883222848
LIC_RS07470 32244843227459
LIC_RS07475 32274623228877
LIC_RS07480 32289043229194
LIC_RS07485 32291913230654
LIC_RS07490 32306513231421
LIC_RS07580 32558783256774
LIC_RS07640 32679153268667
LIC_RS07680 32786313278825
LIC_RS07685 32788323279590
LIC_RS07745 33027393303275
LIC_RS07760 33042483304556
LIC_RS07775 33077923309444
LIC_RS07780 33094513312195
LIC_RS07795 33130253314068
LIC_RS07805 33145623315077
LIC_RS07825 33205813320943
LIC_RS07855 33285803329431
LIC_RS07865 33297703330321
LIC_RS07890 33349033335379
LIC_RS07895 33355783337194
LIC_RS07900 33371973338060
LIC_RS07915 33400363340761
LIC_RS07920 33407583342179
LIC_RS07925 33421843343149
LIC_RS07930 33431213343384
LIC_RS07935 33433983345188
LIC_RS07940 33451963346542
LIC_RS07965 33513893352036
LIC_RS07985 33538193354514
LIC_RS08040 33623293363237
LIC_RS08045 33631853365032
LIC_RS08050 33650363366709
LIC_RS08055 33667153367941
LIC_RS08060 33679633368439
LIC_RS08090 33731703373697
LIC_RS08145 33837013384969
LIC_RS08150 33849733386103
LIC_RS08175 33897533391303
LIC_RS08180 33912913391863
LIC_RS08190 33930053393547
LIC_RS08210 33990593399889
LIC_RS08220 34002143401092
LIC_RS08225 34010943402137
LIC_RS08230 34021843402873
LIC_RS08265 34101743411931
LIC_RS08270 34119463412917
LIC_RS08280 34134213414191
LIC_RS08300 34174673418072
LIC_RS08305 34180753418524
LIC_RS08345 34286103430655
LIC_RS08405 34427283443894
LIC_RS08445 34512593451903
LIC_RS08460 34534743455009
LIC_RS08465 34550133455639
LIC_RS08470 34560533456505
LIC_RS08500 34592223460367
LIC_RS08660 34981433499360
LIC_RS08675 35016763503433
LIC_RS08685 35052653505742
LIC_RS08735 35173303518721
LIC_RS08760 35224153525261
LIC_RS08930 35717863572430
LIC_RS08935 35724273573488
LIC_RS08940 35739253575235
LIC_RS09020 35937733594993
LIC_RS09025 35950103596086
LIC_RS09030 35961033596510
LIC_RS09065 36028173602993
LIC_RS09070 36033663604421
LIC_RS09090 36075733608553
LIC_RS09105 36101993610840
LIC_RS09130 36157503616964
LIC_RS09135 36170163618725
LIC_RS09145 36206663621652
LIC_RS09150 36216883623109
LIC_RS09175 36266163628106
LIC_RS09200 36319833632900
LIC_RS09205 36328973633670
LIC_RS09215 36354843635735
LIC_RS09225 36360523636294
LIC_RS09230 36362913637322
LIC_RS09245 36406163642856
LIC_RS09250 36428533643188
LIC_RS09280 36485023649503
LIC_RS09290 36501593651556
LIC_RS09305 36539463654533
LIC_RS09350 36632873663577
LIC_RS09365 36657923666817
LIC_RS09380 36689863669861
LIC_RS09385 36698583671270
LIC_RS09400 36723463673293
LIC_RS09405 36732953674227
LIC_RS09415 36753373676623
LIC_RS09420 36767513677581
LIC_RS09450 36834213684038
LIC_RS09460 36850543686508
LIC_RS09465 36864533687284
LIC_RS09470 36872883688055
LIC_RS09475 36880853688834
LIC_RS09535 37006473701519
LIC_RS09545 37019683702717
LIC_RS09590 37121553713006
LIC_RS09600 37136343714896
LIC_RS09605 37149623716200
LIC_RS09675 37320743733048
LIC_RS09685 37344523735471
LIC_RS09785 37520603752842
LIC_RS09790 37528433754369
LIC_RS09905 37917723793178
LIC_RS09920 37942653796997
LIC_RS09925 37971023797851
LIC_RS09940 37992333799790
LIC_RS09945 37998013800811
LIC_RS09955 38012053801798
LIC_RS10065 38177913818363
LIC_RS10090 38228423823972
LIC_RS10095 38239903826149
LIC_RS10100 38261723826486
LIC_RS10215 38526943853374
LIC_RS10220 38533933855306
LIC_RS10265 38613733863175
LIC_RS10315 38931773895153
LIC_RS10345 39023533903660
LIC_RS10350 39037423904596
LIC_RS10355 39046123905577
LIC_RS10360 39055743906989
LIC_RS10365 39070793907741
LIC_RS10590 39716463972179
LIC_RS10595 39721913972541
LIC_RS10670 39895383990545
LIC_RS10675 39905493991739
LIC_RS10705 39961803997313
LIC_RS10710 39973133998305
LIC_RS10755 40069004009314
LIC_RS10765 40103104012115
LIC_RS10770 40121484013476
LIC_RS10785 40142764014728
LIC_RS11310 41347914135801
LIC_RS11320 41361644138185
LIC_RS11445 41680074168471
LIC_RS11460 41694424170503
LIC_RS11470 41713754171632
LIC_RS11495 41750794176902
LIC_RS11500 41769044178502
LIC_RS11590 42017144203996
LIC_RS11595 42040134205140
LIC_RS11625 42100824210750
x_2 42300494231359
LIC_RS11760 42377774238541
LIC_RS11765 42385384239554
LIC_RS11770 42395594240947
LIC_RS11780 42412664241877
LIC_RS11785 42419304243111
LIC_RS11805 42478314249390
LIC_RS11815 42500264250691
LIC_RS11825 42515814251931
342902otherNZ_VWNG01000002.1349777Leptospira interrogans serovar Yeoncheon strain 1530d unitig_57, whole genome shotgun sequenceLIC_RS19435 6041449 EMBL GBK
LIC_RS18020 1169212645
LIC_RS18025 1264213973
LIC_RS18040 1556916591
LIC_RS18045 1658817937
LIC_RS18075 2366124578
LIC_RS18080 2457125278
LIC_RS18115 2990831176
LIC_RS18170 4077141847
LIC_RS18185 4354844486
LIC_RS18205 4784949672
LIC_RS18310 7485675620
LIC_RS18315 7611376346
LIC_RS18330 7810279187
LIC_RS18335 7918780068
LIC_RS18410 9772699036
LIC_RS18435 105136106431
LIC_RS18440 106630108375
LIC_RS18445 108553109428
LIC_RS18490 120333120872
LIC_RS18495 120869121720
LIC_RS18505 122404123630
LIC_RS18565 140326140877
LIC_RS18695 168500170389
LIC_RS18700 170382170852
LIC_RS18705 170849172459
LIC_RS18710 172901173788
LIC_RS18835 203520204932
LIC_RS19060 274065276263
LIC_RS19065 276276277331
LIC_RS19220 307174308016
LIC_RS19290 324733325707
LIC_RS19305 327229327954
LIC_RS19340 332019332297
LIC_RS19375 339692341152
LIC_RS19385 343092344214
342904 other NZ_VWNG01000003.1 91738 Leptospira interrogans serovar Yeoncheon strain 1530d unitig_58, whole genome shotgun sequence
342897 other NZ_VWNG01000004.1 82644 Leptospira interrogans serovar Yeoncheon strain 1530d unitig_59, whole genome shotgun sequence
342901 other NZ_VWNG01000006.1 54623 Leptospira interrogans serovar Yeoncheon strain 1530d unitig_61, whole genome shotgun sequence
342899 other NZ_VWNG01000007.1 52974 Leptospira interrogans serovar Yeoncheon strain 1530d unitig_62, whole genome shotgun sequence
342898 other NZ_VWNG01000005.1 52032 Leptospira interrogans serovar Yeoncheon strain 1530d unitig_60, whole genome shotgun sequence
342903 other NZ_VWNG01000001.1 9684 Leptospira interrogans serovar Yeoncheon strain 1530d unitig_2, whole genome shotgun sequence
342896otherNZ_VWNG01000008.12169Leptospira interrogans serovar Yeoncheon strain 1530d unitig_103, whole genome shotgun sequenceLIC_RS19420 *12752169 EMBL GBK