Sequence bin for D64

Contig summary statistics

Contigs
4
Total length
4,846,851
Minimum length
51,223
Maximum length
4,355,742
Mean length
1,211,713
N50
4,355,742
L50
1
N90
359,451
L90
2
N95
359,451
L95
2

FASTAEMBLGBKGFF3

SequenceSequencing methodOriginal designationLengthCommentsLocusStartEndDirectionAnnotation
295885otherNZ_CP077942.14355742Leptospira interrogans serovar Bataviae strain D64 chromosome I, complete sequenceLIC_RS00025 64008319 EMBL GBK
LIC_RS00030 833810842
LIC_RS00035 1084711836
LIC_RS00095 5889859641
LIC_RS00150 7179072638
LIC_RS00160 7417776153
LIC_RS00205 8557286540
pntA_1 (pntA_1) 9303693560
pntA_2 (pntA_2) 9303693560
LIC_RS00245 9441295731
LIC_RS00260 9905399895
LIC_RS00335 121050121571
LIC_RS00340 121572122354
LIC_RS00355 124383124751
LIC_RS00380 129408130253
LIC_RS00385 130260130964
LIC_RS00525 158414159478
LIC_RS00575 167385168005
LIC_RS00580 168002168634
LIC_RS00585 168631169356
LIC_RS00625 179255180211
LIC_RS00655 189343190281
LIC_RS00725 207921209369
BACT000063 (rpmH) 220922221083
LIC_RS00810 223559224269
LIC_RS00815 224262225632
LIC_RS01005 257728258666
LIC_RS01070 270346271215
LIC_RS01090 273456274457
LIC_RS01095 274468276072
LIC_RS01150 289325292846
LIC_RS01160 293881294780
LIC_RS01205 303849305222
LIC_RS01210 305224305901
LIC_RS01375 342811343476
LIC_RS01380 343476344531
LIC_RS01395 346725348845
LIC_RS01435 355951356721
lfb1 356957357234
LIC_RS01495 369121369405
LIC_RS01500 369408370808
LIC_RS01545 378389378772
LIC_RS01550 378775379236
LIC_RS01555 379302379733
LIC_RS01605 389232392126
LIC_RS01610 392166392558
LIC_RS01635 397596398723
LIC_RS01645 399809400246
LIC_RS01660 402607402795
LIC_RS01680 406549407520
LIC_RS01690 408195409331
LIC_RS01745 419800421113
LIC_RS01760 422653425193
LIC_RS01850 442936443904
LIC_RS01855 443901445721
LIC_RS01860 445727446320
LIC_RS01865 446445447404
LIC_RS01870 447416448177
LIC_RS02025 483542483712
LIC_RS02030 483784485724
LIC_RS02035 486228486563
LIC_RS02110 496098496553
LIC_RS02115 496554496970
LIC_RS02120 496963499029
glmU_1 (glmU_1) 526787527230
glmU_2 (glmU_2) 526787527230
LIC_RS02240 527437528375
LIC_RS02250 529078529641
LIC_RS02255 529801531768
LIC_RS02310 542724544334
LIC_RS02315 544351545397
LIC_RS02325 547238548620
BACT000020 (rpsT) 548740549006
LIC_RS02350 551237552028
LIC_RS02365 554894555673
LIC_RS02455 583674584954
LIC_RS02460 584944587592
LIC_RS02515 599699601048
LIC_RS02520 601563602288
LIC_RS02715 679716680264
LIC_RS02720 680288681256
LIC_RS02725 681541682659
LIC_RS02730 682960684900
LIC_RS02740 685587686615
LIC_RS02770 695833697713
LIC_RS02780 699250701676
LIC_RS03010 757460759355
LIC_RS03035 763797766550
LIC_RS03110 786526786942
LIC_RS03210 813064813288
LIC_RS03215 813294814076
LIC_RS03220 814092814919
LIC_RS03225 814960815484
LIC_RS03230 816221816964
LIC_RS03235 817891818229
LIC_RS03270 826162826473
LIC_RS03275 826479827720
LIC_RS03500 879846880979
LIC_RS03505 880976881833
LIC_RS03510 881809882057
LIC_RS03515 882054882713
LIC_RS03700 932162933586
LIC_RS03705 933597935735
LIC_RS03820 961200962291
LIC_RS03870 968264968809
BACT000040 (rplK) 968836969264
BACT000030 (rplA) 969271969963
BACT000039 (rplJ) 969991970524
BACT000036 (rplL) 970574970957
LIC_RS03900 974864979078
BACT000012 (rpsL) 979476979850
BACT000007 (rpsG) 979869980342
BACT000042 (rplM) 984886985335
BACT000009 (rpsI) 985346985744
LIC_RS03955 985828988761
LIC_RS03960 988758989249
LIC_RS03980 992134993762
LIC_RS03990 995437996264
LIC_RS04060 10122131012932
LIC_RS04065 10129561013903
LIC_RS04070 10141001016880
LIC_RS04145 10296871030727
LIC_RS04340 10814631082386
LIC_RS04345 10823901083202
LIC_RS04350 10832151084036
LIC_RS04360 10850911085471
LIC_RS04365 10854751085696
LIC_RS04370 10857051086082
LIC_RS04375 10861051086365
BACT000002 (rpsB) 10863691087253
LIC_RS04385 10872651087864
LIC_RS04395 10886041089158
LIC_RS04400 10891601089885
LIC_RS04405 10898781090786
LIC_RS04410 10907931091962
LIC_RS04415 10919561093683
LIC_RS04420 10936891095419
LIC_RS04425 10954221096615
LIC_RS04430 10966121097406
LIC_RS04440 10980701100382
LIC_RS04445 11004151102319
LIC_RS04450 11023531102829
LIC_RS04520 11147551117862
LIC_RS04525 11178821119255
LIC_RS04530 11192551119806
LIC_RS04540 11204081121631
LIC_RS13515 11394811139669
LIC_RS13510 11396661140457
BACT000060 (rpmE) 11405161140719
LIC_RS13500 11407401142188
LIC_RS13470 11547971155645
LIC_RS13425 11638261164944
LIC_RS13420 11649981165408
LIC_RS13405 11691521170420
LIC_RS13265 11990261200282
LIC_RS13210 12119721212820
LIC_RS13195 12145691216146
LIC_RS13190 12164331217308
LIC_RS13185 12173211218493
LIC_RS13170 12211391222488
LIC_RS13145 12268961228173
LIC_RS13135 12295521231561
LIC_RS13025 12549791256094
LIC_RS13020 12561031257416
LIC_RS13015 12574131258159
LIC_RS13010 12581341259144
LIC_RS12995 12602801262208
LIC_RS12990 12622131263151
LIC_RS12980 12645361265138
LIC_RS12945 12732141274059
LIC_RS12935 12748971275967
LIC_RS12770 13172331318006
LIC_RS12680 13357001336518
LIC_RS12675 13366251337581
LIC_RS12665 13401041341378
LIC_RS12660 13413921342795
sucA_1 (sucA_1) 13435391343985
BACT000064 (rpmI) 13608471361050
BACT000049 (rplT) 13610501361403
LIC_RS12560 13636291364123
LIC_RS12555 13641231367335
LIC_RS12550 13673411368414
LIC_RS12545 13684161368778
LIC_RS12540 13687961369581
LIC_RS12530 13701041371195
BACT000001 (rpsA) 13741471375829
LIC_RS12500 13765971377214
BACT000061 (rpmF) 13775111377711
LIC_RS12485 13777171378724
LIC_RS12375 13976021398702
LIC_RS12330 14127001414529
LIC_RS12325 14146201417394
LIC_RS12300 14206721422093
LIC_RS12250 14355291437367
LIC_RS12210 14460901446638
pfkB_1 (pfkB_1) 14994121499843
LIC_RS11825 15523711552721
LIC_RS11815 15536111554276
LIC_RS11805 15549121556471
LIC_RS11785 15609171562098
LIC_RS11780 15625751563186
LIC_RS11770 15635051564893
LIC_RS11765 15648981565914
LIC_RS11760 15659111566675
x_2 15730931574403
LIC_RS11625 15931011593769
LIC_RS11595 16004121601539
LIC_RS11590 16015561603838
LIC_RS11500 16275121629110
LIC_RS11495 16291121630935
LIC_RS11470 16343821634639
LIC_RS11460 16355111636572
LIC_RS11445 16375431638007
LIC_RS11320 16678311669852
LIC_RS11310 16702151671225
BACT000006 (rpsF) 17816381781913
LIC_RS10785 17819061782358
BACT000018 (rpsR) 17823701782681
BACT000038 (rplI) 17826911783140
LIC_RS10770 17831581784486
LIC_RS10765 17845191786324
LIC_RS10755 17873201789734
LIC_RS10710 17980781799070
LIC_RS10705 17990701800203
tpiA_1 (tpiA_1) 18015611801986
LIC_RS10675 18063831807573
LIC_RS10670 18075771808584
LIC_RS10595 18251541825504
LIC_RS10590 18255161826049
LIC_RS10365 18614311862093
LIC_RS10360 18621831863598
LIC_RS10355 18635951864560
LIC_RS10350 18645761865430
LIC_RS10345 18655121866819
LIC_RS10315 18739581875934
LIC_RS10265 18885711890373
LIC12008 18921381892863
LIC_RS10220 18960421897955
LIC_RS10215 18979741898654
LIC_RS10100 19617621962076
LIC_RS10095 19620991964258
LIC_RS10090 19642761965406
LIC_RS10065 19698851970457
LIC_RS09955 19862101986803
LIC_RS09945 19871971988207
LIC_RS09940 19882181988775
LIC_RS09925 19901571990906
LIC_RS09920 19910111993743
LIC_RS09905 19948301996236
LIC_RS09790 20288642030390
LIC_RS09785 20303912031173
LIC_RS09685 20477312048750
LIC_RS09675 20501542051128
LIC_RS09605 20672262068464
LIC_RS09600 20685302069792
LIC_RS09590 20704202071271
LIC_RS09545 20804312081180
LIC_RS09535 20816412082513
LIC_RS09475 20943222095071
LIC_RS09470 20951012095868
LIC_RS09465 20958722096651
LIC_RS09460 20966482098102
LIC_RS09450 20991182099735
LIC_RS09420 21055752106405
LIC_RS09415 21065332107819
LIC_RS09405 21089272109859
LIC_RS09400 21098612110808
LIC_RS09385 21118842113296
LIC_RS09380 21132932114168
LIC_RS09365 21163372117362
LIC_RS09350 21195792119869
LIC_RS09305 21286352129222
LIC_RS09290 21316122133009
LIC_RS09280 21336652134666
LIC_RS09250 21399682140303
LIC_RS09245 21403002142540
LIC_RS09230 21458342146865
LIC_RS09225 21468622147104
LIC_RS09215 21474212147672
LIC_RS09205 21498212150594
LIC_RS09200 21505912151508
LIC_RS09175 21553852156875
LIC_RS09150 21603822161803
LIC_RS09145 21618392162825
LIC_RS09135 21645772166286
LIC_RS09130 21663382167552
LIC_RS09105 21724612173102
LIC_RS09090 21747482175728
LIC_RS09070 21788802179935
LIC_RS09065 21803082180484
LIC_RS09030 21867912187198
LIC_RS09025 21872152188291
LIC_RS09020 21883082189528
BACT000057 (rpmB) 21960612196345
LIC_RS08940 22080732209383
LIC_RS08935 22098202210881
LIC_RS08930 22108782211522
LIC_RS08760 22584822261328
LIC_RS08735 22646542266045
BACT000021 (rpsU) 22774012277610
LIC_RS08685 22776702278116
LIC_RS08675 22799482281705
LIC_RS08660 22840212285238
LIC_RS08500 23225582323703
LIC_RS08470 23264202326872
LIC_RS08465 23272872327913
LIC_RS08460 23279172329452
LIC_RS08445 23310232331667
LIC_RS08405 23387852339951
LIC_RS08345 23520222354067
LIC_RS08305 23641592364608
LIC_RS08300 23646112365216
LIC_RS08280 23684922369262
LIC_RS08270 23697662370737
LIC_RS08265 23707522372509
LIC_RS08230 23798092380498
LIC_RS08225 23805452381588
LIC_RS08220 23815902382468
LIC_RS08210 23827932383623
LIC_RS08190 23891292389671
LIC_RS08180 23908132391385
LIC_RS08175 23913732392923
LIC_RS08150 23963452397475
LIC_RS08145 23974792398747
LIC_RS08090 24065092407036
LIC_RS08060 24117672412243
LIC_RS08055 24122652413491
LIC_RS08050 24134972415170
LIC_RS08045 24151742417021
LIC_RS08040 24169692417877
BACT000048 (rplS) 24253092425725
LIC_RS07985 24256852426380
BACT000016 (rpsP) 24271232427389
LIC_RS07965 24281622428809
LIC_RS07940 24336452434991
LIC_RS07935 24349992436789
LIC_RS07930 24368032437066
LIC_RS07925 24370382438003
LIC_RS07920 24380082439429
LIC_RS07915 24394262440151
LIC_RS07900 24421272442990
LIC_RS07895 24429932444609
LIC_RS07890 24448082445284
LIC_RS07865 24498662450417
LIC_RS07855 24507542451605
LIC_RS07825 24592442459606
LIC_RS07805 24651102465625
LIC_RS07795 24661192467162
LIC_RS07780 24679922470736
LIC_RS07775 24707432472395
LIC_RS07760 24756312475939
LIC_RS07745 24769122477448
rrs2_3 (rrs2_3) 24837802484229
LIC_RS07685 25002032500961
LIC_RS07680 25009682501162
LIC_RS07640 25111262511878
LIC_RS07580 25230112523907
LIC_RS07490 25470782547848
LIC_RS07485 25478452549308
LIC_RS07480 25493052549595
LIC_RS07475 25496222551037
LIC_RS07470 25510402554015
LIC_RS07455 25556512559211
LIC_RS07450 25592082560065
LIC_RS07445 25600962561379
LIC_RS07265 26060902607352
LIC_RS07260 26073632607959
LIC_RS07240 26101752611917
LIC_RS07220 26151932615678
LIC_RS07215 26156752617384
LIC_RS07210 26178142618923
LIC_RS07200 26220932622362
LIC_RS07195 26227032624706
LIC_RS07190 26248782626170
LIC_RS07180 26263992628504
LIC_RS07125 26428362644200
LIC_RS07115 26449292645576
LIC_RS07095 26488492649130
LIC_RS07080 26505902652575
LIC_RS07075 26526012653401
LIC_RS07060 26549512656231
LIC_RS07055 26562842658401
LIC_RS07045 26603482661127
LIC_RS07040 26611342661397
LIC_RS07035 26613942662197
LIC_RS07025 26630482664112
LIC_RS07020 26646802665006
LIC_RS06950 26821322683370
lipL32_2 (lipL32_2) 26841292684578
lipL32_3 (lipL32_3) 26841292684578
LIC_RS06855 27010212701311
LIC_RS06850 27013262702966
LIC_RS06825 27066752707562
LIC_RS06815 27104132710886
LIC_RS06745 27302002731357
LIC_RS06740 27314652731932
LIC_RS06705 27377682739018
LIC_RS06700 27391022739776
LIC_RS06555 27757722776881
LIC_RS06550 27770262777907
LIC_RS06535 27795192780808
LIC_RS06510 27876302787857
mreA_2 (mreA_2) 27908652791299
mreA_1 (mreA_1) 27908652791299
LIC_RS06490 27920932794036
LIC_RS06485 27940382794550
LIC_RS06480 27945472795644
LIC_RS06475 27957182796740
LIC_RS06470 27969322798494
LIC_RS06395 28146672816070
LIC_RS06390 28160882816948
LIC_RS06385 28169632818474
LIC_RS06375 28190292819550
LIC_RS06370 28195542819853
LIC_RS06340 28238282824637
LIC_RS06140 28806822881674
LIC_RS06115 28856062887588
LIC_RS06110 28878232889217
LIC_RS06015 29179632918475
LIC_RS06005 29196802920423
LIC_RS05885 29478242949203
LIC_RS05880 29492002949838
LIC_RS05875 29499552951895
LIC_RS05855 29550172956126
LIC_RS05850 29561282956943
LIC_RS05845 29569462957854
LIC_RS05750 29807732981621
LIC_RS05725 29855252986439
LIC_RS05555 30299623031890
LIC_RS05535 30352193035542
LIC_RS05530 30356193036785
LIC_RS05505 30436653045128
LIC_RS05500 30451823046198
LIC_RS05360 30842033085507
LIC_RS05355 30855483086645
LIC_RS05300 31042153104556
LIC_RS05230 31226923124536
LIC_RS05225 31245053126551
16S_interrogans 31296283131132
rrs2_3 (rrs2_3) 31305853131034
LIC_RS05190 31416603142142
LIC_RS05185 31421393143263
LIC_RS05180 31433343143669
caiB_1 (caiB_1) 31875553187956
x_1 32042553206246
LIC_RS04720 32618463262805
LIC_RS04605 32865483286967
LIC_RS04600 32869703287380
LIC_RS13755 33278643328625
LIC_RS13760 33286223329557
LIC_RS13855 33613193363415
BACT000015 (rpsO) 33634273363693
LIC_RS13880 33676443369026
LIC_RS13970 33893613390647
LIC_RS13975 33912783391805
LIC_RS13980 33918053392605
LIC_RS14070 34138573414417
LIC_RS14075 34144143414950
LIC_RS14080 34149523416169
LIC_RS14085 34161693416648
LIC_RS14090 34166643417995
LIC_RS14095 34179923419032
LIC_RS14110 34200693422015
LIC_RS14115 34220173423705
LIC_RS14120 34237023425240
LIC_RS14230 34519503453200
BACT000056 (rpmA) 34552683455522
BACT000050 (rplU) 34558353456149
LIC_RS14300 34654223466180
LIC_RS14305 34661873466519
LIC_RS14425 34893913490308
LIC_RS14430 34902833491308
LIC_RS14485 34985543498994
LIC_RS14490 34991143499881
LIC_RS14520 35068883508177
LIC_RS14530 35098133510760
LIC_RS14570 35177143518640
BACT000046 (rplQ) 35289603529475
LIC_RS14615 35294773530454
BACT000004 (rpsD) 35304773531100
BACT000011 (rpsK) 35311123531522
BACT000013 (rpsM) 35315253531902
BACT000065 (rpmJ) 35319063532019
adk_2 (adk_2) 35323113532740
adk_3 (adk_3) 35323123532740
secY 35328203534202
secY_3 (secY_3) 35328533533353
BACT000044 (rplO) 35342173534759
BACT000059 (rpmD) 35347753534954
BACT000005 (rpsE) 35349673535473
BACT000047 (rplR) 35354753535843
BACT000035 (rplF) 35358473536386
BACT000008 (rpsH) 35364133536814
BACT000014 (rpsN) 35368343537019
BACT000034 (rplE) 35370393537587
BACT000053 (rplX) 35375913537950
BACT000043 (rplN) 35379503538342
BACT000017 (rpsQ) 35383443538613
BACT000058 (rpmC) 35386233538907
BACT000045 (rplP) 35389043539317
BACT000003 (rpsC) 35393403540017
BACT000051 (rplV) 35400303540362
BACT000019 (rpsS) 35403623540643
BACT000031 (rplB) 35406523541491
LIC_RS14735 35406523541491
BACT000052 (rplW) 35414953541809
BACT000033 (rplD) 35418063542441
BACT000032 (rplC) 35424593543079
BACT000010 (rpsJ) 35430913543399
LIC_RS14760 35434143544619
LIC_RS15120 36453833647383
LIC_RS15130 36481043648565
LIC_RS15195 36623903663283
LIC_RS15200 36632863663747
LIC_RS15215 36658773666158
LIC_RS15220 36671403668690
LIC_RS15250 36785373679511
lipL41_3 (lipL41_3) 36802553680746
lipL41_2 (lipL41_2) 36802553680747
LIC_RS15275 36831403684342
LIC_RS15280 36843613685590
LIC_RS15510 37477623748778
LIC_RS15535 37565833757269
LIC_RS15540 37578253760350
LIC_RS15925 38628563863608
LIC_RS15980 38772783878615
LIC_RS16170 39296083930150
LIC_RS16175 39301663931500
LIC_RS16195 39362453937246
LIC_RS16225 39432593944230
LIC_RS16230 39442273945006
LIC_RS16285 39505793951436
LIC_RS16320 39592303960555
LIC_RS16350 39672793967566
LIC_RS16505 40140634014731
LIC_RS16515 40151054016442
LIC_RS16565 40252784027704
LIC_RS16570 40277834030629
icdA_2 (icdA_2) 40571874057743
icdA_3 (icdA_3) 40571894057743
LIC_RS16780 40769224078394
LIC_RS16785 40784364079602
LIC_RS16800 40822034082598
LIC_RS16825 40859744087365
LIC_RS16830 40874344088591
LIC_RS16895 41043684105339
LIC_RS16975 41242454125555
LIC_RS16980 41255714126836
LIC_RS17045 41357994137196
LIC_RS17065 41409124141640
LIC_RS17070 41416454142574
LIC_RS17110 41614314161913
LIC_RS17115 41619234162336
LIC_RS17180 41759944176722
LIC_RS17185 41767194177369
LIC_RS17210 41810724182637
LIC_RS17225 41837524185140
LIC_RS17230 41851374187272
LIC_RS17340 42132304214480
LIC_RS17345 42144804215397
LIC_RS17350 42153944216134
LIC_RS17405 42236074224617
LIC_RS17410 42246144225657
LIC_RS17415 42256544226655
LIC_RS17420 42266524227605
LIC_RS17445 42329414233177
LIC_RS17510 42509694252933
LIC_RS17735 43039434304197
LIC_RS17740 43041974304649
LIC_RS17745 43046914305959
LIC_RS17750 43059974307907
LIC_RS17790 43146714315000
LIC_RS17860 43265504328055
LIC_RS17865 43280604328407
LIC_RS17870 43283554328993
LIC_RS17875 43293824330956
LIC_RS17880 43309604331808
LIC_RS17890 43343634335616
LIC_RS17895 43356094336418
LIC_RS17900 43365394337558
LIC_RS17905 43375584337905
LIC_RS17930 43402354341110
LIC_RS17935 43411134341874
LIC_RS17965 43513664353273
LIC_RS17970 43534174354340
361081Illumina + ONT hybrid359451CP077943.1LIC_RS19065 1656117616 EMBL GBK
LIC_RS19060 1762919827
BACT000062 (rpmG) 7453374697
LIC_RS18835 8923890650
LIC_RS18710 120358121245
LIC_RS18705 121687123297
LIC_RS18700 123294123764
LIC_RS18695 123757125646
LIC_RS18565 153213153764
LIC_RS18505 170837172063
LIC_RS18495 172747173598
LIC_RS18490 173595174134
LIC_RS18445 185223186098
LIC_RS18440 186276188021
LIC_RS18435 188220189515
LIC_RS18410 195616196926
LIC_RS18335 214568215449
LIC_RS18330 215449216534
LIC_RS18315 218292218525
LIC_RS18310 219018219782
LIC_RS18205 244813246636
LIC_RS18185 249999250937
LIC_RS18170 252637253620
LIC_RS18115 263322264590
LIC_RS18080 273463274170
LIC_RS18075 274163275080
LIC_RS18045 280954282303
LIC_RS18040 282300283322
LIC_RS18025 284918286249
LIC_RS18020 286246287199
LIC_RS19435 297441298286
LIC_RS19420 300639301649
LIC_RS19385 310058311107
LIC_RS19375 313120314580
LIC_RS19340 320019320297
LIC_RS19305 324957325682
LIC_RS19290 327201328175
LIC_RS19220 344893345735
361082 Illumina + ONT hybrid CP077944.1 80435
361083 Illumina + ONT hybrid CP077945.1 51223