⚠ Maintenance: A BIGSdb-Pasteur maintenance is scheduled on Tuesday, May 12th (Central European Time). During this period, the server and API will be unavailable. Please note that job submission will not be available and all unfinished jobs will be killed. Sorry for any inconvenience. If any questions, contact us
Just out ! A novel version of diphtOscan is available at https://gitlab.pasteur.fr/BEBP/diphtoscan. It is easier to install and to use on local computers.
diphtOscan scans genomes of the Corynebacterium diphtheriae species complex and extracts information used for clinical and public health management, including diphtheria toxin and antimicrobial resistance genes, biovar, species and subtyping information. This release also supports authenticated access to BIGSdb-Pasteur’s diphtheria source database, ensuring access to the most recent genotype nomenclature.