Full information on isolate 12822 (id:506)

Projects

This isolate is a member of the following projects:

Bordetella genus phylogeny: Reference genomes for Bordetella genomic analysis. Public project
B. bronchiseptica phylogeny: Records for the phylogeny
Public Genomes: public genomes analyzed in Bridel et al 2022
Public-nrdA project: public isolates used to build a phylogeny based on nrdA (BORD004376) locus

id: 506
isolate: 12822
aliases: BX470249; GCF_000195675.1; NC_002928; PRJNA25; PRJNA57615
duplicate number: 106
species: B. parapertussis
country: Germany
continent: Europe
year: 1993
source type: Human
host: human
accession number: BX470249
comments: RefStrain (Type strain)
sender: Keith Jolley, University of Oxford
curator: Valerie Bouchez, Institut Pasteur, Paris (E-mail: valerie.bouchez@pasteur.fr)
update history: 22 updates show details
date entered: 2016-09-01
datestamp: 2024-04-23

Bridel S, Bouchez V, Brancotte B, Hauck S, Armatys N, Landier A, Mühle E, Guillot S, Toubiana J, Maiden MCJ, Jolley KA, Brisse S (2022). A comprehensive resource for Bordetella genomic epidemiology and biodiversity studies. Nat Commun 13:3807
Parkhill J, Sebaihia M, Preston A, Murphy LD, Thomson N, Harris DE, Holden MT, Churcher CM, Bentley SD, Mungall KL, Cerdeño-Tárraga AM, Temple L, James K, Harris B, Quail MA, Achtman M, Atkin R, Baker S, Basham D, Bason N, Cherevach I, Chillingworth T, Collins M, Cronin A, Davis P, Doggett J, Feltwell T, Goble A, Hamlin N, Hauser H, Holroyd S, Jagels K, Leather S, Moule S, Norberczak H, O'Neil S, Ormond D, Price C, Rabbinowitsch E, Rutter S, Sanders M, Saunders D, Seeger K, Sharp S, Simmonds M, Skelton J, Squares R, Squares S, Stevens K, Unwin L, Whitehead S, Barrell BG, Maskell DJ (2003). Comparative analysis of the genome sequences of Bordetella pertussis, Bordetella parapertussis and Bordetella bronchiseptica. Nat Genet 35:32-40

Rank	Taxon	Taxonomy	Support	Matches
SPECIES	Bordetella parapertussis	Proteobacteria > Betaproteobacteria > Burkholderiales > Alcaligenaceae > Bordetella > Bordetella parapertussis	100%

Analysis performed: 2022-11-02

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