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Institut Pasteur
This page provides access to genotypic data for Bordetella isolates based on Multilocus Sequence Typing (MLST) and core genome MLST (cgMLST). See references for more details.
⚠ Maintenance: A BIGSdb-Pasteur maintenance is scheduled on Tuesday, Nov 11th and Wednesday, Nov 12th (Central European Time). During this period, the server and API will be unavailable. Please note that job submission will not be available and all unfinished jobs will be killed. Sorry for any inconvenience. If any questions, contact us
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Alleles & profiles database
The typing database contains nomenclature - allele definitions that provide an identifier for every unique allele sequence, and MLST profiles that index each unique combination of alleles with a sequence type (ST).
Isolates & genomes database
The isolate database consists of isolate records containing provenance and phenotype information linked to molecular typing information. These records may also include genome assemblies.
Curators access
Data Curation is performed on a voluntary basis and is based on a community effort.