Full information on isolate RB50 (id:505)

Projects

This isolate is a member of the following projects:

Bordetella genus phylogeny: Reference genomes for Bordetella genomic analysis. Public project
B. bronchiseptica phylogeny: Records for the phylogeny
Public Genomes: public genomes analyzed in Bridel et al 2022
Public-nrdA project: public isolates used to build a phylogeny based on nrdA (BORD004376) locus

id: 505
isolate: RB50
aliases: BX470250; GCF_000195675.1; NC_002927; PRJNA24; PRJNA57613
duplicate number: 107
species: B. bronchiseptica I-1
site: nasal cavity
disease: healthy
country: USA
continent: North America
host: rabbit
accession number: BX470250
comments: RefStrain
sender: Keith Jolley, University of Oxford
curator: Sebastien Bridel, Institut Pasteur, Paris, France (E-mail: sbridel@pasteur.fr)
update history: 20 updates show details
date entered: 2016-09-01
datestamp: 2022-03-31

Bridel S, Bouchez V, Brancotte B, Hauck S, Armatys N, Landier A, Mühle E, Guillot S, Toubiana J, Maiden MCJ, Jolley KA, Brisse S (2022). A comprehensive resource for Bordetella genomic epidemiology and biodiversity studies. Nat Commun 13:3807
Parkhill J, Sebaihia M, Preston A, Murphy LD, Thomson N, Harris DE, Holden MT, Churcher CM, Bentley SD, Mungall KL, Cerdeño-Tárraga AM, Temple L, James K, Harris B, Quail MA, Achtman M, Atkin R, Baker S, Basham D, Bason N, Cherevach I, Chillingworth T, Collins M, Cronin A, Davis P, Doggett J, Feltwell T, Goble A, Hamlin N, Hauser H, Holroyd S, Jagels K, Leather S, Moule S, Norberczak H, O'Neil S, Ormond D, Price C, Rabbinowitsch E, Rutter S, Sanders M, Saunders D, Seeger K, Sharp S, Simmonds M, Skelton J, Squares R, Squares S, Stevens K, Unwin L, Whitehead S, Barrell BG, Maskell DJ (2003). Comparative analysis of the genome sequences of Bordetella pertussis, Bordetella parapertussis and Bordetella bronchiseptica. Nat Genet 35:32-40

Rank	Taxon	Taxonomy	Support	Matches
SPECIES	Bordetella bronchiseptica	Proteobacteria > Betaproteobacteria > Burkholderiales > Alcaligenaceae > Bordetella > Bordetella bronchiseptica	100%

Analysis performed: 2022-11-02

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