Full information on isolate LMG 15945T (id:166)

Projects

This isolate is a member of the following projects:

Bordetella genus phylogeny: Reference genomes for Bordetella genomic analysis. Public project
Public Genomes: public genomes analyzed in Bridel et al 2022
Public-nrdA project: public isolates used to build a phylogeny based on nrdA (BORD004376) locus

id: 166
isolate: LMG 15945T
aliases: ATCC51541T; CCM4585T; CCUG34073T; CDCF5101T; CP007494.1; DSM13416T; NCTC12912T
species: B. holmesii
site: blood
country: USA
continent: North America
region: New York
city: Buffalo
year: 1983
source type: Human
host: human
other source info: RefStrain, Type Strain
comments: RefStrain - Type Strain
sender: Theodore Spilker, Univ. of Michigan
curator: Sebastien Bridel, Institut Pasteur, Paris, France (E-mail: sbridel@pasteur.fr)
update history: 16 updates show details
date entered: 2013-09-30
datestamp: 2022-01-14

Bridel S, Bouchez V, Brancotte B, Hauck S, Armatys N, Landier A, Mühle E, Guillot S, Toubiana J, Maiden MCJ, Jolley KA, Brisse S (2022). A comprehensive resource for Bordetella genomic epidemiology and biodiversity studies. Nat Commun 13:3807
Tettelin H, Hooven TA, Zhao X, Su Q, Sadzewicz L, Tallon LJ, Fraser CM, Ratner AJ (2017). Whole-Genome Sequences of Bacteremia Isolates of Bordetella holmesii. Genome Announc 5:

Rank	Taxon	Taxonomy	Support	Matches
SPECIES	Bordetella holmesii	Proteobacteria > Betaproteobacteria > Burkholderiales > Alcaligenaceae > Bordetella > Bordetella holmesii	100%

Analysis performed: 2022-11-02

Navigate and select schemes within tree to display allele designations

Export:

Analysis: