Sequence bin for IP28590

Contig summary statistics

Contigs
177
Total length
4,578,996
Minimum length
350
Maximum length
194,796
Mean length
25,871
N50
50,845
L50
28
N90
13,625
L90
88
N95
8,599
L95
109

FASTAEMBLGBKGFF3

SequenceSequencing methodOriginal designationLengthCommentsLocusStartEndDirectionAnnotation
47058contig_00001194796YPTB3649 1793619582 EMBL GBK
YPTB0370 3641237020
YPTB0373 3994640164
YPTB0375 4163343039
YPTB0376 4313644215
YPTB0377 4427345466
YPTB3574 6932970783
YPTB3570 7301173463
YPTB3565 7898980032
YPTB3563 8122881716
YPTB3561 8231383782
YPTB3558 8858590030
YPTB3549 9038191292
YPTB3548 9163291835
YPTB3547 9184392778
YPTB3538 99897100307
YPTB3536 114958116373
YPTB3533 118183118569
YPTB3531 119154120089
YPTB3528 122483122965
YPTB3527 123134123421
YPTB3526 123445124878
YPTB3525 124941125666
YPTB3524 125673126218
YPTB3523 126202126765
YPTB3518 130680131462
YPTB3510 137807138211
YPTB3508 139895140323
YPTB3506 141124141765
YPTB3503 143229144647
YPTB3498 153694154347
YPTB3491 172460173164
YPTB3488 175411175806
YPTB3485 176780177085
YPTB3479 180918182222
YPTB3478 182777184186
YPTB3476 185968187458
46977contig_00002148199YPTB3660 10231844 EMBL GBK
YPTB3663 30113484
YPTB3665 47115223
YPTB3668 76619037
YPTB3674 1233612956
YPTB3675 1298713376
YPTB3676 1339313749
YPTB3677 1389714013
YPTB3678 1404815379
YPTB3679 1538715821
YPTB3680 1582516004
YPTB3681 1600716510
YPTB3682 1652516878
YPTB3683 1688817421
YPTB3684 1743617828
YPTB3685 1786218167
YPTB3686 1818118720
YPTB3687 1873519049
YPTB3688 1906019431
YPTB3690 1985120042
YPTB3691 2004220452
YPTB3692 2046521163
YPTB3693 2118121513
YPTB3694 2152821806
YPTB3695 2182122645
YPTB3696 2266222964
YPTB3697 2296123566
YPTB3698 2357724206
YPTB3699 2423924550
YPTB3704 2927529745
YPTB3705 2984230216
YPTB3706 3035430641
YPTB3709 3143932161
YPTB3711 3354633764
YPTB3714 3476236570
YPTB3725 4783848074
YPTB3729 5009350725
YPTB3732 5448955064
YPTB3734 5807458643
YPTB3746 7162372300
YPTB3750 7557376094
YPTB3760 8708187488
YPTB3764 9230893027
YPTB3786 120936122924
YPTB3791 128764129357
47035contig_00003109002YPTB3847 31343724 EMBL GBK
YPTB1921 2562726157
47075contig_00004101606YPTB2716 2814029867 EMBL GBK
YPTB2715 2991530172
YPTB2714 3062131589
47030contig_00005100924YPTB3225 66746946 EMBL GBK
YPTB3222 91729498
YPTB3218 1160612736
YPTB3217 1272913322
YPTB3215 1367314227
YPTB3210 1861919503
YPTB3205 2283223539
YPTB3198 3123933233
YPTB3197 3357334589
YPTB3196 3469235855
YPTB3182 5002051117
YPTB3181 5117651562
YPTB3167 6351064409
YPTB3165 6518266915
46950contig_0000695559YPTB3042 1312215278 EMBL GBK
YPTB3036 2002520552
YPTB3035 2056522811
YPTB3034 2298523857
YPTB3033 2386424658
YPTB3023 3896040285
YPTB3017 4703347950
YPTB3012 5214452989
YPTB3003 6152762252
YPTB2998 6665767415
YPTB2997 6742568273
YPTB2994 7218972737
YPTB2993 7274173763
YPTB2987 8061281571
YPTB2978 8870690424
YPTB2977 9053291239
YPTB2975 9180792622
YPTB2974 9281793470
YPTB2973 9346394494
47107contig_0000795169YPTB0842 79509071 EMBL GBK
YPTB0835 1520315751
YPTB0834 1577316021
YPTB0833 1637517736
47027contig_0000892865YPTB1454 3115431660 EMBL GBK
YPTB1445 3929840950
YPTB1442 4429646416
YPTB1439 4837649386
YPTB1436 5425655656
YPTB1428 6960270924
YPTB1417 8311784790
YPTB1416 8495685648
YPTB1414 8734288427
47090contig_0000989418YPTB2838 1007111252 EMBL GBK
YPTB2819 3902239360
YPTB2799 6573366545
YPTB2797 6791668461
YPTB2794 7066771293
YPTB2789 7578676850
YPTB2785 7705877528
YPTB2781 8043281145
YPTB2779 8247982931
YPTB2775 8669287819
46981contig_0001085234YPTB0734 1082511280 EMBL GBK
YPTB0731 1394614425
YPTB0726 1858219352
YPTB0723 2126621802
YPTB0719 2589426688
YPTB0713 4728549948
YPTB0712 5014550909
YPTB0703 5928160324
YPTB0701 6123761989
YPTB0693 6786969020
YPTB0692 6909370349
YPTB0690 7120572125
YPTB0685 7726778349
47106contig_0001184571t3c_3 1031584 EMBL GBK
t3c_4 15862797
t3c_5 28153030
t3c_6 85379244
t3c_7 92539468
t3c_8 94659740
t3c_9 978110029
t3c_10 1002610757
t3c_11 1077411367
t3c_13 1349215531
t3c_17 1761318563
t3c_18 1893919589
t3c_19 1961219881
t3c_20 1988320677
t3c_21 2066721743
YPTB0337 4135042354
YPTB0402 6416065596
YPTB0404 6680667099
YPTB0408 7080671372
YPTB0411 7353173923
YPTB0412 7394074674
47052contig_0001282928YPTB1408 10493331 EMBL GBK
YPTB1403 70598402
YPTB1397 1730119025
YPTB1395 2033920557
YPTB1394 2080223078
YPTB1391 2436326312
YPTB1386 3159933251
YPTB1377 4346544196
YPTB1376 4420844924
YPTB1362 5116952302
YPTB1361 5246953578
YPTB1358 5540155664
46968contig_0001382875YPTB1125 991310440 EMBL GBK
YPTB1119 2128922089
YPTB1116 2458525337
YPTB1110 3321834096
YPTB1106 3871239386
YPTB1105 3938640111
YPTB1104 4123141713
YPTB1103 4207944661
YPTB1098 4752047990
YPTB1097 4804849943
YPTB1096 4998051092
YPTB1091 5510656071
47038contig_0001482831fliE (fliE) 48255136 EMBL GBK
fliF (fliF) 54657183
fliG (fliG) 71808172
YPTB3347 71808172
fliH (fliH) 81658887
fliI (fliI) 888710251
fliJ (fliJ) 1056711013
fliL (fliL) 1259913069
fliM (fliM) 1307514079
fliN (fliN) 1407214488
YPTB3352 1407214488
fliP (fliP) 1503615788
fliQ (fliQ) 1580116070
YPTB3354 1580116070
fliR (fliR) 1608816870
flgL (flgL) 1697617956
flgK (flgK) 1806219726
flgJ (flgJ) 1991320875
flgI (flgI) 2087521996
flgH (flgH) 2200822724
flgG (flgG) 2282923611
flgF (flgF) 2363824393
flgE (flgE) 2441525728
flgD (flgD) 2601726703
flgC (flgC) 2671927123
YPTB3339 2671927123
flgB (flgB) 2712927542
YPTB3340 2712927542
flgA (flgA) 2773228406
flgM (flgM) 2855528854
flgN (flgN) 2889029330
flhE (flhE) 2970730129
flhA (flhA) 3012932207
YPTB3357 3012932207
flhB (flhB) 3220733355
YPTB2396 3542836072
YPTB2397 3608236471
YPTB3319 5292553812
flhC (flhC) 5395054531
flhD (flhD) 5453554894
47045contig_0001578608YPTB0903 29313332 EMBL GBK
YPTB1795 3215933070
YPTB0920 4325044569
YPTB0925 5134251944
YPTB0930 5566357510
YPTB0933 6015160600
YPTB0934 6066461773
YPTB0936 6240362819
YPTB0950 7469375307
YPTB0951 7529777288
46945contig_0001678419YPTB2273 21513116 EMBL GBK
YPTB2274 31033993
YPTB2275 39934985
YPTB2283 1388315157
YPTB3313 1795018417
x_4 3326833357
YPTB2312 4889749643
YPTB2322 6883069846
YPTB2323 6997670440
YPTB2324 7067971065
47022contig_0001772677YPTB0104 1399614313 EMBL GBK
YPTB0101 1514317341
YPTB0097 2019121522
YPTB0089 2335323592
YPTB0086 2510626629
YPTB0070 3784938547
YPTB0055 5218053112
YPTB0047 5953459770
YPTB0044 6210762565
46948contig_0001869725YPTB3395 2607927974 EMBL GBK
YPTB3396 2810528686
YPTB3398 2959430019
YPTB3407 3861840048
YPTB3413 4781548174
YPTB3416 5071750932
47109contig_0001964213YPTB0671 1046011557 EMBL GBK
YPTB0633 3938940207
YPTB0632 4022140598
YPTB0622 4937750198
YPTB0620 5053351486
YPTB0616 5534456282
47043contig_0002060662YPTB2261 5062451127 EMBL GBK
YPTB2263 5315253598
YPTB2266 5520756604
46940contig_0002158378YPTB2160 27823423 EMBL GBK
yaxA (yaxA) 48886123
YPTB2156 1171013776
YPTB2147 2326024429
YPTB2146 2443624747
YPTB2144 2604226644
YPTB2139 3552935780
YPTB2137 3710137862
47028contig_0002257841YPTB3940 3151533929 EMBL GBK
YPTB3942 3520836308
YPTB3945 3840638546
YPTB3946 3856538924
YPTB3947 3888839145
YPTB3950 4241043609
47110contig_0002352993YPTB3840 42045106 EMBL GBK
47061contig_0002452736YPTB0573 67077144 EMBL GBK
YPTB0574 70897532
YPTB0576 968210296
YPTB0577 1063610797
YPTB0583 1708318306
YPTB0598 3696037607
YPTB0599 3760438470
YPTB0603 4356144490
YPTB0604 4449445783
46973contig_0002552177YPTB2023 34914075 EMBL GBK
YPTB2019 70397776
YPTB2009 1408414938
YPTB2008 1529816107
YPTB2007 1610416505
YPTB2005 1737818460
YPTB2001 2191022857
47063contig_0002651253YPTB0774 72767902 EMBL GBK
YPTB0768 1427714594
YPTB0765 1683717745
YPTB3743 1775619174
YPTB0751 3484637080
YPTB0747 4434745048
YPTB0744 4723647580
47009contig_0002750935YPTB2594 73857879 EMBL GBK
YPTB2595 80748529
YPTB2597 896110163
YPTB2600 1383814281
YPTB2601 1432414611
YPTB2602 1462415880
YPTB2609 2105121737
YPTB2612 2372025237
YPTB2613 2525025759
YPTB2617 2931229974
YPTB3790 3096331973
46966contig_0002850845YPTB0270 9012352 EMBL GBK
YPTB0267 46616850
YPTB0266 68628025
YPTB0265 81128813
YPTB0264 886810388
YPTB0262 1119712219
YPTB0261 1223413016
YPTB0250 2348824249
YPTB0247 2799628949
YPTB0240 3288733732
YPTB0229 4339344160
YPTB0228 4415745443
YPTB0227 4544046366
47064contig_0002950739YPTB2064 75188174 EMBL GBK
YPTB2060 1152812340
YPTB2059 1234412613
YPTB2053 1962719971
YPTB2047 2542326865
YPTB2045 2799829314
YPTB2042 3112231907
YPTB2038 3451535258
YPTB2032 4099141962
47018contig_0003050105YPTB0523 2067321722 EMBL GBK
YPTB0530 2991830367
YPTB0531 3052732038
YPTB0532 3231833412
47088contig_0003149902pilL (pilL) 3677437748 EMBL GBK
pilM (pilM) 3775038187
pilN (pilN) 3819939887
pilO (pilO) 3989041197
pilP (pilP) 4118441663
pilQ (pilQ) 4167343226
pilS (pilS) 4434344930
pilU (pilU) 4492745595
pilV (pilV) 4559946876
47011contig_0003248931YPTB0548 2474925624 EMBL GBK
46979contig_0003348697YPTB0424 74278368 EMBL GBK
YPTB0425 84848789
YPTB0438 2260422996
YPTB0439 2300223322
YPTB0440 2332723554
YPTB0441 2359424046
YPTB0444 2574826368
YPTB0450 3069232023
47050contig_0003448608YPTB2389 1892219155 EMBL GBK
47020contig_0003545674YPTB0166 56065932 EMBL GBK
YPTB0167 65667825
YPTB0171 1166612928
YPTB0177 1823219317
YPTB0182 2617427298
YPTB0190 3292933753
YPTB0193 3551736233
46953 contig_00036 43510
47013contig_0003743157YPTB1166 48735625 EMBL GBK
YPTB1169 74118562
YPTB1172 1093611754
YPTB1192 3189632141
YPTB1209 3356734673
YPTB1212 3765938645
47113 contig_00038 42145
47108contig_0003941894x_6 2407424661 EMBL GBK
YPTB3921 2887929235
YPTB3920 3170532259
YPTB3916 3758339652
YPTB3915 3966240576
YPTB3914 4083741409
47094contig_0004039970YPTB0494 1089011768 EMBL GBK
YPTB0485 1529316177
YPTB0483 1868818957
YPTB0481 2002320433
YPTB0478 2471125169
YPTB0476 2625327593
YPTB0475 2760328436
YPTB0473 3051231141
YPTB0472 3128831581
YPTB0471 3171032186
YPTB0470 3244633894
YPTB0465 3804238299
YPTB0464 3831938630
YPTB0463 3889039861
47021contig_0004138366YPTB0981 48845027 EMBL GBK
YPTB0979 89339301
YPTB0970 1854119002
YPTB0966 2302923727
YPTB0963 2505226938
YPTB0962 2715027422
YPTB0960 3018931460
YPTB0959 3166532288
YPTB0958 3274534049
YPTB0955 3518435762
47069 contig_00042 38284
47046contig_0004337410YPTB0003 1492215914 EMBL GBK
YPTB0002 1610016561
YPTB3973 2125022074
YPTB3971 2242422894
YPTB3970 2290923442
YPTB3969 2345724998
YPTB3966 2748527907
YPTB3965 2844229812
YPTB3961 3445935346
YPTB3960 3544636222
47114contig_0004436721YPTB2967 62086963 EMBL GBK
YPTB2966 70107729
YPTB2965 77458209
47049 contig_00045 35529
46954contig_0004635427YPTB2448 67557297 EMBL GBK
YPTB2447 76878991
YPTB2442 1411515317
YPTB2432 2495026320
YPTB2427 2951830771
46994contig_0004734612YPTB1724 1803119515 EMBL GBK
fliZ (fliZ) 2881429323
fliA (fliA) 2937930101
YPTB3320 2937930101
fliS (fliS) 3375034148
fliT (fliT) 3416034522
47096contig_0004834515YPTB1253 1522016350 EMBL GBK
YPTB2557 2422025191
YPTB2558 2519126048
46978contig_0004934305YPTB1309 73037887 EMBL GBK
YPTB1316 1504615618
YPTB1330 2347124409
47002contig_0005034239YPTB0851 29665608 EMBL GBK
YPTB0857 1280913321
YPTB0858 1349313834
YPTB0873 2803029190
YPTB0876 3073331275
46958contig_0005134110YPTB0894 82798506 EMBL GBK
YPTB0892 958110804
YPTB0890 1142312052
YPTB0889 1204512845
YPTB0887 1408015423
47006contig_0005233419YPTB0277 66026985 EMBL GBK
YPTB0278 69877532
YPTB0279 77268154
YPTB0280 81588862
YPTB0282 981210180
YPTB0296 2814528735
46983contig_0005332966YPTB1297 66376864 EMBL GBK
47051contig_0005432736YPTB1149 30904256 EMBL GBK
YPTB1147 56228429
YPTB1146 87029418
YPTB1145 947311239
YPTB1144 1124011587
YPTB2915 2334123547
46971contig_0005531659YPTB1025 1405214966 EMBL GBK
YPTB1027 1609716873
YPTB1029 1754018226
YPTB1034 2331323807
47041contig_0005631240YPTB2873 47766398 EMBL GBK
YPTB2872 64136751
YPTB2869 1023311486
YPTB2859 1845419683
YPTB2857 2013620459
YPTB2885 2327723612
YPTB2853 2363323833
46986 contig_00057 31230
47065contig_0005829964x_5 1235912610 EMBL GBK
YPTB2353 1981720371
YPTB2354 2062121286
47062 contig_00059 29670
46989 contig_00060 29397
47076contig_0006128328YPTB2549 217873 EMBL GBK
46997contig_0006227635YPTB1531 16252878 EMBL GBK
47024contig_0006327221YPTB2640 926910033 EMBL GBK
YPTB2637 1311014420
YPTB2632 1938920474
YPTB2630 2131122117
47104 contig_00064 26606
46961 contig_00065 26356
47047contig_0006626033YPTB0219 2006820340 EMBL GBK
YPTB0222 2271623384
YPTB0224 2480025657
47100 contig_00067 25223
47019contig_0006824603YPTB2585 18823678 EMBL GBK
YPTB2581 84589435
YPTB2580 94509992
YPTB2578 1054710849
YPTB2577 1084612690
47044contig_0006924317YPTB2467 52846309 EMBL GBK
YPTB2470 88749110
YPTB2471 92649998
YPTB2474 1193912973
YPTB2475 1301013177
47014 contig_00070 24307
46974 contig_00071 23545
47059contig_0007222917YPTB1940 1162212149 EMBL GBK
47055 contig_00073 22698
46959contig_0007422176YPTB2761 1112311389 EMBL GBK
46943 contig_00075 20907
47037contig_0007620824x_1 1362315032 EMBL GBK
YPTB0028 1910619543
47072contig_0007720263YPTB2886 1330513685 EMBL GBK
YPTB2887 1368514416
YPTB2889 1531816229
YPTB2890 1622616906
46991contig_0007820215YPTB1555 40404654 EMBL GBK
YPTB1557 54066143
YPTB1558 61496739
YPTB1559 67397806
x_2 1686817083
47066contig_0007920113YPTB0121 59177317 EMBL GBK
47031contig_0008019922YPTB2895 13732329 EMBL GBK
YPTB2897 30103585
yplA (yplA) 85749536
YPTB1141 1126111839
YPTB1135 1606416558
47073contig_0008119237YPTB0990 1069211072 EMBL GBK
YPTB0993 1448914821
YPTB0994 1482115426
47034contig_0008217961YPTB0132 18522190 EMBL GBK
YPTB0134 44396085
YPTB0137 73859235
46985contig_0008317386YPTB2126 71698359 EMBL GBK
YPTB2125 83599165
YPTB2116 1652016816
47060 contig_00084 17054
47000 contig_00085 16119
46952 contig_00086 14597
47082contig_0008714140YPTB2090 37274773 EMBL GBK
YPTB2089 49995550
YPTB2084 1001510428
YPTB2083 1077611771
46972 contig_00088 13625
47115contig_0008913491YPTB1524 12572267 EMBL GBK
YPTB3230 22883808
46939contig_0009013454YPTB0033 49517032 EMBL GBK
YPTB0037 1018110804
46980 contig_00091 13145
47067contig_0009212681YPTB2341 27483098 EMBL GBK
YPTB2340 31953392
YPTB2339 34303786
YPTB2337 43395322
YPTB2336 53377724
47039 contig_00093 12399
46947contig_0009412299YPTB1647 6512015 EMBL GBK
46970contig_0009511747YPTB1537 60126593 EMBL GBK
YPTB1535 74968608
47036 contig_00096 11535
47010contig_0009711281YPTB2929 84368783 EMBL GBK
47078 contig_00098 11000
47079 contig_00099 10992
46990 contig_00100 9954
46946 contig_00101 9564
47005contig_001029414YPTB1159 16322924 EMBL GBK
YPTB1157 43014729
YPTB1155 54285829
47077contig_001039352YPTB1615 76248010 EMBL GBK
x_3 82368349
47003 contig_00104 9073
47042 contig_00105 8909
47105 contig_00106 8863
46998 contig_00107 8854
47048contig_001088813YPTB2940 40644750 EMBL GBK
YPTB2942 56667384
46992 contig_00109 8599
46944 contig_00110 8207
47093 contig_00111 7735
46976 contig_00112 7682
46999 contig_00113 7572
46982 contig_00114 7455
47057 contig_00115 6934
47040 contig_00116 6759
46964 contig_00117 6754
46993 contig_00118 6552
47070 contig_00119 6482
47085 contig_00120 6415
47004 contig_00121 6157
47101 contig_00122 6149
46965 contig_00123 6005
47099contig_001245784YPTB2167 26223203 EMBL GBK
46960 contig_00125 5653
47087 contig_00126 5634
47017contig_001295538t3c_1 18862518 EMBL GBK
46988 contig_00130 4880
47081 contig_00131 4602
47083 contig_00132 4522
47056 contig_00133 4453
47074 contig_00134 4444
47012 contig_00135 4260
47092 contig_00136 4204
46951 contig_00137 4203
47111 contig_00138 4060
47016 contig_00139 3616
46963 contig_00140 3476
46956 contig_00127 3425
47054 contig_00141 3359
46969 contig_00142 3313
46975 contig_00143 3291
46967 contig_00144 2944
47103 contig_00145 2760
47025 contig_00146 2459
47089 contig_00147 2432
47084 contig_00148 2266
47033 contig_00149 1927
47053 contig_00150 1843
47091 contig_00128 1785
46984 contig_00151 1768
47068 contig_00152 1584
47007 contig_00153 1577
46987 contig_00154 1556
46996 contig_00155 1371
47102 contig_00156 1344
46957 contig_00157 1287
46962 contig_00159 1238
46942 contig_00160 1185
47095 contig_00161 1159
47071 contig_00158 1095
47023 contig_00162 956
47098 contig_00163 927
47080 contig_00164 896
47001 contig_00165 704
47097 contig_00166 613
46995 contig_00167 588
46941 contig_00169 578
46949 contig_00170 543
47032 contig_00171 525
47015 contig_00168 518
47029 contig_00172 502
46955 contig_00173 471
47026 contig_00174 461
47112 contig_00175 455
47086 contig_00176 437
47008 contig_00177 350