Sequence bin for IP28586

Contig summary statistics

Contigs
181
Total length
4,194,721
Minimum length
362
Maximum length
198,817
Mean length
23,176
N50
49,744
L50
27
N90
12,515
L90
90
N95
7,418
L95
111

FASTAEMBLGBKGFF3

SequenceSequencing methodOriginal designationLengthCommentsLocusStartEndDirectionAnnotation
46102contig_00001198817YPTB2714 2739428362 EMBL GBK
YPTB2715 2882329080
YPTB2716 2912830855
YPTB2761 7054670812
YPTB2775 8390485031
YPTB2779 8876589217
YPTB2781 9036591078
YPTB2785 9384394313
YPTB2789 9442795491
YPTB2794 100053100679
YPTB2797 102861103406
YPTB2799 106070106882
YPTB2819 132737133075
YPTB2838 158180159361
YPTB2853 183545183745
YPTB2885 183747184082
YPTB2857 186767187090
YPTB2859 187624188853
YPTB2869 195980197233
46019contig_00002139414YPTB2427 2952130774 EMBL GBK
YPTB2432 3396835338
YPTB2442 4518246384
YPTB2447 5117052474
YPTB2448 5288653428
YPTB2467 7026771292
YPTB2470 7366673902
YPTB2471 7405674790
YPTB2474 7673177765
YPTB2475 7779977966
46079contig_00003138515YPTB0375 13602766 EMBL GBK
YPTB0376 28593938
YPTB0377 39855178
YPTB3574 4200643460
YPTB3570 4601246464
YPTB3565 5206453107
YPTB3563 5419854686
YPTB3561 5528356752
YPTB3558 6155162996
YPTB3549 6337864289
YPTB3548 6463664839
YPTB3547 6484765782
YPTB3538 7307573485
YPTB3536 8781189226
YPTB3533 9576996155
YPTB3531 9683797772
YPTB3528 9948199963
YPTB3527 100124100411
YPTB3526 100435101868
YPTB3525 101930102655
YPTB3524 102662103207
YPTB3523 103191103754
YPTB3518 107465108247
YPTB3510 114473114877
YPTB3508 116547116975
YPTB3506 117785118426
YPTB3503 119902121320
YPTB3498 130263130916
46119contig_00004116309YPTB3764 2324523964 EMBL GBK
YPTB3760 2818028587
YPTB3750 3943239953
YPTB3746 4329843975
YPTB3734 5987460443
YPTB3732 6282463399
YPTB3729 6701267644
YPTB3725 6948269718
YPTB3714 7965881466
YPTB3711 8255582773
YPTB3709 8417084892
YPTB3706 8568285969
YPTB3705 8610786481
YPTB3704 8657887048
YPTB3699 9177092081
YPTB3698 9211492743
YPTB3697 9275493359
YPTB3696 9335693658
YPTB3695 9367594499
YPTB3694 9451494792
YPTB3693 9480795139
YPTB3692 9515795855
YPTB3691 9586896278
YPTB3690 9627896469
YPTB3688 9688997260
YPTB3687 9727197585
YPTB3686 9760098139
YPTB3685 9815398458
YPTB3684 9849298884
YPTB3683 9889999432
YPTB3682 9944299795
YPTB3681 99810100313
YPTB3680 100316100495
YPTB3679 100499100933
YPTB3678 100941102272
YPTB3677 102306102422
YPTB3676 102570102926
YPTB3675 102943103332
YPTB3674 103363103983
YPTB3668 107300108676
YPTB3665 111082111594
YPTB3663 112821113294
YPTB3660 114462115283
46074contig_00005109224YPTB0121 59027302 EMBL GBK
YPTB0086 3109132614
YPTB0089 3417434413
YPTB0097 3623537566
YPTB0101 4081743015
YPTB0104 4358143898
YPTB0070 5642457122
YPTB0055 7069871630
YPTB0047 7787178107
YPTB0044 8042880886
YPTB3840 103652104554
45992contig_0000686494YPTB0166 69997325 EMBL GBK
YPTB0167 78999158
YPTB0171 1292114183
YPTB0177 1939120476
YPTB0182 2710528229
YPTB0190 3374834572
YPTB0193 3633637052
YPTB0219 6690867180
YPTB0222 6963070298
YPTB0224 7152372380
YPTB0227 7461675542
YPTB0228 7553976825
YPTB0229 7682277589
46152contig_0000784945t3c_6 55866293 EMBL GBK
t3c_7 63046519
t3c_10 70807808
t3c_18 1605816708
t3c_19 1674017009
t3c_20 1701117805
YPTB0337 2785628860
YPTB0402 6499366429
YPTB0404 6764367936
YPTB0408 7153872104
YPTB0411 7398374375
YPTB0412 7439275126
46071contig_0000884743YPTB0835 38894437 EMBL GBK
YPTB0834 44594707
YPTB0833 49356296
46134contig_0000983071flhD (flhD) 511870 EMBL GBK
flhC (flhC) 8741455
YPTB3319 15932480
YPTB2397 1264713036
YPTB2396 1304613690
flhB (flhB) 1393815086
flhA (flhA) 1508617164
YPTB3357 1508617164
flhE (flhE) 1716417586
flgN (flgN) 1795118391
flgM (flgM) 1843918738
YPTB3340 1980820221
flgB (flgB) 1980820221
YPTB3339 2022720631
flgC (flgC) 2022720631
flgD (flgD) 2064721336
flgE (flgE) 2148322745
flgF (flgF) 2276723522
flgG (flgG) 2354924331
flgH (flgH) 2443625149
flgI (flgI) 2516126270
flgJ (flgJ) 2627027232
flgL (flgL) 2934730327
YPTB3354 3117831447
fliQ (fliQ) 3117831447
fliP (fliP) 3162732379
fliN (fliN) 3292133337
YPTB3352 3292133337
fliM (fliM) 3333434335
fliL (fliL) 3434134811
fliJ (fliJ) 3635736803
fliI (fliI) 3685138182
fliH (fliH) 3821538937
fliG (fliG) 3893039922
YPTB3347 3893039922
fliF (fliF) 3991941637
fliE (fliE) 4198442295
fliT (fliT) 4749347855
fliS (fliS) 4786748265
fliA (fliA) 5268353405
YPTB3320 5268353405
fliZ (fliZ) 5346053969
YPTB1724 6332964813
46023contig_0001073489YPTB1524 1967820688 EMBL GBK
YPTB3230 2070922229
YPTB2549 5301253668
46151contig_0001170588x_2 5392654141 EMBL GBK
YPTB1559 6303364100
YPTB1558 6410064690
YPTB1557 6469665433
YPTB1555 6618566799
46096contig_0001269524YPTB3914 2810828680 EMBL GBK
YPTB3915 2924230156
YPTB3916 3016632235
YPTB3920 3719537749
YPTB3921 4009640452
x_6 4840448991
46010contig_0001365950YPTB1416 17122404 EMBL GBK
YPTB1417 25734246
YPTB1428 1668818010
YPTB1436 3162433024
YPTB1439 3800339013
YPTB1442 4113543255
YPTB1445 4660548257
YPTB1454 5591156417
46082contig_0001461564YPTB3940 1793320347 EMBL GBK
YPTB3942 2161722717
YPTB3945 2481724957
YPTB3946 2497625335
YPTB3947 2529925556
YPTB3950 2905030249
YPTB3960 4563146407
YPTB3961 4650947396
YPTB3965 5222253592
YPTB3966 5407954501
YPTB3969 5692958470
YPTB3970 5848559018
YPTB3971 5903359503
YPTB3973 5997960803
46089contig_0001560991YPTB0713 1174714410 EMBL GBK
YPTB0712 1460715371
YPTB0703 2650427547
YPTB0701 2845829210
YPTB0693 3513536286
YPTB0692 3635937615
YPTB0690 3847139391
YPTB0685 4452145603
45987contig_0001660747YPTB0604 68648153 EMBL GBK
YPTB0603 81579086
YPTB0599 1419915065
YPTB0598 1506215709
YPTB0583 3712538348
YPTB0577 4466344824
YPTB0576 4490345517
YPTB0574 4765148094
YPTB0573 4803948476
46066contig_0001759147YPTB1408 10723354 EMBL GBK
YPTB1403 71048447
YPTB1397 1738819112
YPTB1395 2015420372
YPTB1394 2059222868
YPTB1391 2412626075
YPTB1386 3144433096
YPTB1377 4362544356
YPTB1376 4436845084
YPTB1362 5100452137
YPTB1361 5225953368
YPTB1358 5499455257
45990contig_0001858081YPTB2341 5286653216 EMBL GBK
YPTB2340 5331353510
YPTB2339 5354853904
YPTB2337 5432855311
YPTB2336 5532657713
46154contig_0001956682YPTB3313 122589 EMBL GBK
YPTB2283 34264700
YPTB2275 1413715129
YPTB2274 1512916019
YPTB2273 1600616971
YPTB2266 2225923656
YPTB2263 2529825744
YPTB2261 2773628239
46087contig_0002056374YPTB0450 2326824599 EMBL GBK
YPTB0444 2979930419
YPTB0441 3215532607
YPTB0440 3264732874
YPTB0439 3287933199
YPTB0438 3320533597
YPTB0425 4724347548
YPTB0424 4766648607
45982contig_0002155294YPTB0671 19523049 EMBL GBK
YPTB0633 2975330571
YPTB0632 3058530962
YPTB0622 3971040531
YPTB0620 4093141884
YPTB0616 4572746665
46072contig_0002255222YPTB1212 45195505 EMBL GBK
YPTB1209 85059611
YPTB1192 1104811293
YPTB2609 3120631892
YPTB2612 3386235379
YPTB2613 3539235901
YPTB2617 3932939991
YPTB3790 4094841958
46156contig_0002353965YPTB0744 36914035 EMBL GBK
YPTB0747 63567057
YPTB0751 1464416878
YPTB3743 3015131569
YPTB0765 3158032488
YPTB0768 3475735074
YPTB0774 4589046516
46105contig_0002453438YPTB0930 17313578 EMBL GBK
YPTB0925 74908092
YPTB0920 1487216191
YPTB1795 2635227263
YPTB0903 3923939640
YPTB0894 4587146098
YPTB0892 4718648409
YPTB0890 4902849657
YPTB0889 4965050450
YPTB0887 5168553028
46015contig_0002551902YPTB3395 1822120116 EMBL GBK
YPTB3396 2015220733
YPTB3398 2163022055
YPTB3407 3058632016
YPTB3413 3967140030
YPTB3416 4238742602
46107contig_0002650960YPTB2001 48275774 EMBL GBK
YPTB2005 919110273
YPTB2007 1113411535
YPTB2008 1153212341
YPTB2009 1245913313
YPTB2019 1866119398
YPTB2023 2246023044
YPTB2032 3028931260
YPTB2038 3696337706
YPTB2042 4030741092
YPTB2045 4290044216
YPTB2047 4544146883
46052contig_0002749744YPTB2640 3155432318 EMBL GBK
YPTB2637 3542536735
YPTB2632 4244243527
YPTB2630 4438245188
46008contig_0002849281YPTB1309 243827 EMBL GBK
YPTB1316 78078379
YPTB1330 1628617224
46108contig_0002948723YPTB0933 4453 EMBL GBK
YPTB0934 5321641
YPTB0936 22732689
YPTB0950 1452415138
YPTB0951 1512817119
YPTB0955 2106421642
YPTB0958 2274824052
YPTB0959 2452525148
YPTB0960 2537726648
YPTB0962 2941529687
YPTB0963 2992631812
YPTB0966 3317733875
YPTB0970 3797838439
YPTB0979 4746247830
46061contig_0003047958YPTB1034 2941529909 EMBL GBK
YPTB1029 3485635542
YPTB1027 3620536981
YPTB1025 3822739141
46132contig_0003145273YPTB1921 1634816878 EMBL GBK
46054contig_0003244268YPTB2594 83288822 EMBL GBK
YPTB2595 89239378
YPTB2597 978110983
YPTB2600 1506815511
YPTB2601 1555415841
YPTB2602 1585417110
YPTB1172 2274323561
YPTB1169 2598027131
YPTB1166 2905629808
YPTB1159 3634637638
YPTB1157 3901939447
YPTB1155 4014640547
46021contig_0003343310YPTB0523 2241923468 EMBL GBK
YPTB0530 3170232151
YPTB0531 3225433765
YPTB0532 3404635140
46094contig_0003443090YPTB3182 1271613813 EMBL GBK
YPTB3181 1388814274
YPTB3167 2580226701
YPTB3165 2745529188
46063 contig_00035 42715
45995contig_0003640155YPTB0370 249857 EMBL GBK
YPTB3649 1761419260
46056contig_0003738342YPTB3042 1041312569 EMBL GBK
YPTB3036 1730717834
YPTB3035 1784720093
YPTB3034 2034121213
YPTB3033 2122022014
YPTB3023 3671938044
46159contig_0003838314YPTB2312 78598605 EMBL GBK
x_4 2386823957
46153contig_0003938279YPTB1253 1456915699 EMBL GBK
YPTB2557 3133032301
YPTB2558 3230133158
46138contig_0004037265YPTB0240 25973442 EMBL GBK
YPTB0247 80599012
YPTB0250 1283913600
YPTB0261 2419724979
YPTB0262 2499426016
YPTB0264 2683828358
YPTB0265 2841429115
YPTB0266 2924130404
YPTB0267 3041632605
YPTB0270 3491436365
46064 contig_00041 36446
46113contig_0004235028YPTB0033 63208401 EMBL GBK
YPTB0037 1155112174
YPTB3847 3129231882
46090 contig_00043 32669
46160contig_0004432459YPTB2915 87058911 EMBL GBK
YPTB1144 2097121318
YPTB1145 2131923085
YPTB1146 2314023856
YPTB1147 2419126998
YPTB1149 2836229528
46093contig_0004531750YPTB2872 32323570 EMBL GBK
YPTB2873 35865208
YPTB2886 2446924849
YPTB2887 2484925580
YPTB2889 2646927380
YPTB2890 2737728057
45996contig_0004631227YPTB1297 2483625063 EMBL GBK
46036contig_0004730790YPTB3218 40205150 EMBL GBK
YPTB3217 51435736
YPTB3215 60886642
YPTB3210 1080011684
YPTB3205 1525015957
YPTB3198 2386025854
YPTB3197 2617627192
YPTB3196 2729528458
46140contig_0004830420YPTB3476 1180713297 EMBL GBK
YPTB3478 1496216371
YPTB3479 1697718281
YPTB3485 2398924294
YPTB3488 2521925614
YPTB3491 2793928643
46020contig_0004929902YPTB1105 199924 EMBL GBK
YPTB1106 9241598
YPTB1110 62717149
YPTB1116 1479915551
YPTB1119 1804018840
46044contig_0005028829YPTB0734 1075111206 EMBL GBK
YPTB0731 1387914358
YPTB0726 1879319563
YPTB0723 2154722083
YPTB0719 2627827072
46000 contig_00051 28116
46048contig_0005227783YPTB0485 24233307 EMBL GBK
YPTB0483 58476116
YPTB0481 71837593
YPTB0478 1187112329
YPTB0476 1341114751
YPTB0475 1476115594
YPTB0473 1772418353
YPTB0472 1850118794
YPTB0471 1892319399
YPTB0470 1966021108
YPTB0465 2550425761
YPTB0464 2578126092
YPTB0463 2635227323
46025contig_0005327093YPTB0981 28593002 EMBL GBK
YPTB0990 1871419094
YPTB0993 2198522317
YPTB0994 2231722922
46095contig_0005426675YPTB0028 64406877 EMBL GBK
x_1 1135312762
46013contig_0005526510YPTB2965 2057921043 EMBL GBK
YPTB2966 2105921778
YPTB2967 2196022715
46085contig_0005626416YPTB3017 49865903 EMBL GBK
YPTB3012 1022611071
YPTB3003 2304823773
46028 contig_00057 25778
46031 contig_00060 24995
46120 contig_00061 24903
46039contig_0006224642YPTB0851 27375379 EMBL GBK
YPTB0857 1294213454
YPTB0858 1362613967
YPTB0873 1829019450
YPTB0876 2100421546
46068 contig_00063 24413
46148contig_0006423293YPTB2144 29353537 EMBL GBK
YPTB2146 48235134
YPTB2147 51416310
YPTB2156 1268414750
YPTB2160 1968620327
46003contig_0006522548YPTB2354 35614226 EMBL GBK
YPTB2353 44134967
x_5 1870918960
46091contig_0006621096YPTB3786 870610694 EMBL GBK
46109 contig_00058 20607
46144contig_0006720584YPTB1537 54656046 EMBL GBK
YPTB1535 69528064
YPTB1531 1178213035
46062 contig_00068 20230
46088contig_0006920227YPTB1104 15352017 EMBL GBK
YPTB1103 23754957
YPTB1098 78938363
YPTB1097 843810333
YPTB1096 1035611468
YPTB1091 1570916674
46057contig_0007020158YPTB0003 1461915611 EMBL GBK
YPTB0002 1579516256
46016 contig_00071 19825
46103contig_0007219288YPTB0282 89579325 EMBL GBK
YPTB0280 1025210956
YPTB0279 1096011388
YPTB0278 1156512110
YPTB0277 1211212495
46099contig_0007319174YPTB3791 1712317716 EMBL GBK
46001contig_0007418651YPTB2322 920510221 EMBL GBK
YPTB2323 1031310777
YPTB2324 1092111307
45985contig_0007518377YPTB2126 71878377 EMBL GBK
YPTB2125 83779183
YPTB2116 1634116637
46081contig_0007618107YPTB1647 55226886 EMBL GBK
46116contig_0007718043YPTB2139 47965047 EMBL GBK
YPTB2137 63627123
46033contig_0007817876YPTB2053 13681712 EMBL GBK
YPTB2059 88329101
YPTB2060 91059917
YPTB2064 1177612432
46110contig_0007917870YPTB0548 1040911284 EMBL GBK
46075contig_0008017599YPTB2987 10602019 EMBL GBK
YPTB2993 89089930
YPTB2994 993410482
YPTB2997 1441615264
YPTB2998 1527416032
46117contig_0008117346YPTB0137 28354685 EMBL GBK
YPTB0134 60857731
YPTB0132 1025010588
46078contig_0008217155YPTB2929 96119958 EMBL GBK
46027contig_0008316139YPTB0296 46545244 EMBL GBK
46104contig_0008416115YPTB2585 17423538 EMBL GBK
YPTB2581 83199296
YPTB2580 93119853
YPTB2578 1040810710
YPTB2577 1070712551
46042contig_0008516030YPTB1135 19082402 EMBL GBK
YPTB1141 66247202
YPTB2897 1290613481
YPTB2895 1416215118
45994 contig_00086 14860
46126 contig_00087 14530
46014contig_0008814121YPTB1940 36294156 EMBL GBK
46161 contig_00089 13733
45981 contig_00090 12631
46022 contig_00091 12515
46111contig_0009212500YPTB1125 79948521 EMBL GBK
46083 contig_00093 11940
45989contig_0009411740YPTB2973 10572088 EMBL GBK
YPTB2974 20812734
YPTB2975 28103625
YPTB2977 41774884
YPTB2978 51136831
46012 contig_00095 11575
46080contig_0009611234YPTB0842 22183339 EMBL GBK
46053 contig_00097 11008
46122 contig_00098 10531
46123 contig_00099 10417
46032 contig_00100 10215
45988 contig_00101 9478
46047contig_001029154YPTB0494 11412019 EMBL GBK
46121 contig_00103 9139
46045contig_001049108YPTB2940 44625148 EMBL GBK
YPTB2942 60847802
46086 contig_00105 8811
46149 contig_00106 8421
46040contig_001078291YPTB3225 46314903 EMBL GBK
YPTB3222 72447570
46092 contig_00108 8198
46034 contig_00109 7937
45986 contig_00110 7658
46137 contig_00111 7523
46018 contig_00112 7418
46041 contig_00113 7395
46024 contig_00114 7298
46101 contig_00115 7102
46084 contig_00116 6988
46006 contig_00117 6891
46035 contig_00118 6826
46114contig_001196760YPTB2167 25643145 EMBL GBK
46129 contig_00120 6742
46046 contig_00121 6719
46145 contig_00122 6108
46007 contig_00123 5883
46143 contig_00124 5811
46002 contig_00125 5765
46135contig_001285492t3c_1 30443676 EMBL GBK
46060 contig_00129 5137
46030 contig_00130 4850
46125 contig_00131 4637
46127 contig_00132 4547
46106 contig_00059 4488
46100 contig_00133 4363
46118 contig_00134 3857
46055 contig_00135 3736
46136 contig_00136 3731
45993 contig_00137 3720
46157 contig_00138 3447
46131 contig_00126 3373
46059 contig_00139 3322
46005contig_001403317YPTB2083 2741269 EMBL GBK
46098contig_001413185t3c_3 12762757 EMBL GBK
46011contig_001423012YPTB0373 660878 EMBL GBK
46017 contig_00143 2831
46009 contig_00144 2777
46147 contig_00145 2653
46069 contig_00146 2289
46133 contig_00147 2196
46128 contig_00148 2099
46077 contig_00149 2098
46097 contig_00150 2032
46026 contig_00151 1901
46112 contig_00152 1880
46050 contig_00153 1854
45998 contig_00127 1786
46029 contig_00154 1695
46038 contig_00155 1668
45999 contig_00157 1432
46115 contig_00158 1412
46004 contig_00159 1405
45984 contig_00160 1390
46146 contig_00156 1383
46139 contig_00161 1291
46067 contig_00162 1284
46142 contig_00163 998
46124 contig_00164 900
46043 contig_00165 874
46058 contig_00168 747
46141 contig_00166 622
46037 contig_00167 603
46073 contig_00172 588
45997 contig_00173 566
45983 contig_00169 531
46070 contig_00174 517
45991 contig_00170 488
46130 contig_00176 485
46051 contig_00177 471
46049 contig_00178 471
46076 contig_00171 448
46065 contig_00180 388
46155 contig_00179 388
46150 contig_00181 381
46158 contig_00175 362