Sequence bin for IP28585

Contig summary statistics

Contigs
218
Total length
4,322,067
Minimum length
219
Maximum length
138,548
Mean length
19,826
N50
49,304
L50
27
N90
12,096
L90
95
N95
5,639
L95
121

FASTAEMBLGBKGFF3

SequenceSequencing methodOriginal designationLengthCommentsLocusStartEndDirectionAnnotation
45905contig_00001138548YPTB0166 2241022736 EMBL GBK
YPTB0167 2331024569
YPTB0171 2833229594
YPTB0177 3480235887
YPTB0182 4253543659
YPTB0190 4917850002
YPTB0193 5176652482
YPTB0219 8234782619
YPTB0222 8506985737
YPTB0224 8696287819
YPTB0227 9005590981
YPTB0228 9097892264
YPTB0229 9226193028
YPTB0240 104570105415
YPTB0247 109532110485
YPTB0250 114312115073
YPTB0261 125480126262
YPTB0262 126277127299
YPTB0264 128121129641
YPTB0265 129697130398
YPTB0266 130524131687
YPTB0267 131699133888
YPTB0270 136197137648
45807contig_00002137312YPTB0375 13012707 EMBL GBK
YPTB0376 28003879
YPTB0377 39265119
YPTB3574 4197943433
YPTB3570 4586246314
YPTB3565 5191452957
YPTB3563 5404854536
YPTB3561 5513356602
YPTB3558 6140162846
YPTB3549 6322864139
YPTB3548 6448664689
YPTB3547 6469765632
YPTB3538 7292473334
YPTB3536 8768389098
YPTB3533 9571396099
YPTB3531 9678197716
YPTB3528 9942599907
YPTB3527 100068100355
YPTB3526 100379101812
YPTB3525 101874102599
YPTB3524 102606103151
YPTB3523 103135103698
YPTB3518 107409108191
YPTB3510 114417114821
YPTB3508 116491116919
YPTB3506 117729118370
YPTB3503 119847121265
YPTB3498 130208130861
45878contig_00003136752YPTB3660 10271848 EMBL GBK
YPTB3663 30163489
YPTB3665 47165228
YPTB3668 76349010
YPTB3674 1232712947
YPTB3675 1297813367
YPTB3676 1338413740
YPTB3677 1388814004
YPTB3678 1403815369
YPTB3679 1537715811
YPTB3680 1581515994
YPTB3681 1599716500
YPTB3682 1651516868
YPTB3683 1687817411
YPTB3684 1742617818
YPTB3685 1785218157
YPTB3686 1817118710
YPTB3687 1872519039
YPTB3688 1905019421
YPTB3690 1984120032
YPTB3691 2003220442
YPTB3692 2045521153
YPTB3693 2117121503
YPTB3694 2151821796
YPTB3695 2181122635
YPTB3696 2265222954
YPTB3697 2295123556
YPTB3698 2356724196
YPTB3699 2422924540
YPTB3704 2926229732
YPTB3705 2982930203
YPTB3706 3034130628
YPTB3709 3141832140
YPTB3711 3353733755
YPTB3714 3478436592
YPTB3725 4653246768
YPTB3729 4860649238
YPTB3732 5285153426
YPTB3734 5580756376
YPTB3746 7226872945
YPTB3750 7629076811
YPTB3760 8765688063
YPTB3764 9228092999
YPTB3786 126943128931
45930contig_00004118424YPTB0450 1370115032 EMBL GBK
YPTB0444 2023220852
YPTB0441 2258823040
YPTB0440 2308023307
YPTB0439 2331223632
YPTB0438 2363824030
YPTB0425 3781738122
YPTB0424 3824039181
YPTB0412 5693757671
YPTB0411 5768858080
YPTB0408 5995960525
YPTB0404 6412664419
YPTB0402 6563367069
YPTB0337 8957090574
t3c_20 100625101419
t3c_19 101421101690
t3c_18 101722102372
t3c_10 110752111480
t3c_7 112041112256
t3c_6 112267112974
45872contig_00005110658YPTB1408 11393421 EMBL GBK
YPTB1403 71718514
YPTB1397 1745519179
YPTB1395 2022120439
YPTB1394 2065922935
YPTB1391 2419326142
YPTB1386 3151133163
YPTB1377 4371244443
YPTB1376 4445545171
YPTB1362 5110352236
YPTB1361 5235853467
YPTB1358 5509355356
YPTB1330 9450795445
YPTB1316 103352103924
45776contig_0000698599YPTB2322 940010416 EMBL GBK
YPTB2323 1050810972
YPTB2324 1111611502
YPTB2064 2802228678
YPTB2060 3053731349
YPTB2059 3135331622
YPTB2053 3874339087
YPTB2047 4451845960
YPTB2045 4718948505
YPTB2042 5031351098
YPTB2038 5369954442
YPTB2032 6007061041
YPTB2023 6828568869
YPTB2019 7193172668
YPTB2009 7801778871
YPTB2008 7899079799
YPTB2007 7979680197
YPTB2005 8105882140
YPTB2001 8555786504
45970contig_0000798490flhD (flhD) 1802618385 EMBL GBK
flhC (flhC) 1838918970
YPTB3319 1910819995
YPTB2397 2971930108
YPTB2396 3011830762
flhB (flhB) 3101032158
flhA (flhA) 3215834236
YPTB3357 3215834236
flhE (flhE) 3423634658
flgN (flgN) 3502335463
flgM (flgM) 3551135810
YPTB3340 3687937292
flgB (flgB) 3687937292
YPTB3339 3729837702
flgC (flgC) 3729837702
flgD (flgD) 3771838407
flgE (flgE) 3855439810
flgF (flgF) 3983240587
flgG (flgG) 4061441396
flgH (flgH) 4150142214
flgI (flgI) 4222643335
flgJ (flgJ) 4333544297
flgL (flgL) 4641247392
YPTB3354 4824348512
fliQ (fliQ) 4824348512
fliP (fliP) 4869349445
fliN (fliN) 4998750403
YPTB3352 4998750403
fliM (fliM) 5040051401
fliL (fliL) 5140751877
fliJ (fliJ) 5342353869
fliI (fliI) 5391755248
fliH (fliH) 5528156003
fliG (fliG) 5599656988
YPTB3347 5599656988
fliF (fliF) 5698558703
fliE (fliE) 5905059361
fliT (fliT) 6455964921
fliS (fliS) 6493365331
fliA (fliA) 6974970471
YPTB3320 6974970471
fliZ (fliZ) 7052671035
YPTB1724 8039581879
45868contig_0000893717YPTB1414 32914376 EMBL GBK
YPTB1416 61476839
YPTB1417 70088681
YPTB1428 2109922421
YPTB1436 3611337513
YPTB1439 4249243502
YPTB1442 4562447744
YPTB1445 5109452746
YPTB1454 6040060906
45948contig_0000993263YPTB2475 3817438341 EMBL GBK
YPTB2474 3837539409
YPTB2471 4135042084
YPTB2470 4223842474
YPTB2467 4484845873
YPTB2448 6271263254
YPTB2447 6366664970
YPTB2442 6975670958
YPTB2432 8080282172
YPTB2427 8536686619
45811contig_0001091094YPTB1555 38914505 EMBL GBK
YPTB1557 52575994
YPTB1558 60006590
YPTB1559 65907657
x_2 1654916764
45969contig_0001185830YPTB0713 1333215995 EMBL GBK
YPTB0712 1619216956
YPTB0703 2808929132
YPTB0701 3004330795
YPTB0693 3672037871
YPTB0692 3794439200
YPTB0690 4005640976
YPTB0685 4610647188
YPTB0671 6476365860
45898contig_0001283276YPTB0835 40284576 EMBL GBK
YPTB0834 45984846
YPTB0833 50746435
45796contig_0001382399YPTB3165 1755419287 EMBL GBK
YPTB3167 2004120940
YPTB3181 3244332829
YPTB3182 3290434001
YPTB3196 4904250205
YPTB3197 5030851324
YPTB3198 5164653640
YPTB3205 6154362250
YPTB3210 6569566579
YPTB3215 7061371167
YPTB3217 7151972112
YPTB3218 7210573235
YPTB3222 7548875814
YPTB3225 7803378305
45882contig_0001472977YPTB2838 1921520396 EMBL GBK
YPTB2819 4501145349
YPTB2799 7030471116
45890contig_0001572006YPTB1524 1843519445 EMBL GBK
YPTB3230 1946620986
YPTB2549 5176652422
45770contig_0001664904YPTB0044 36784136 EMBL GBK
YPTB0047 64576693
YPTB0055 1293213864
YPTB0070 2744028138
YPTB0104 4066340980
YPTB0101 4154643744
YPTB0097 4687148202
YPTB0089 5002450263
YPTB0086 5182353346
45861contig_0001761565YPTB0774 1546016086 EMBL GBK
YPTB0768 2690327220
YPTB0765 2948830396
YPTB3743 3040731825
YPTB0751 4509847332
YPTB0747 5491955620
YPTB0744 5794158285
45773contig_0001861413YPTB3973 7271551 EMBL GBK
YPTB3971 20272497
YPTB3970 25123045
YPTB3969 30604601
YPTB3966 70297451
YPTB3965 79389308
YPTB3961 1413415021
YPTB3960 1512315899
YPTB3950 3128132480
YPTB3947 3597436231
YPTB3946 3619536554
YPTB3945 3657336713
YPTB3942 3881339913
YPTB3940 4118343597
45972contig_0001960770YPTB2090 37044750 EMBL GBK
YPTB2089 51155666
YPTB2084 990710320
YPTB2083 1066811663
YPTB2336 3432536712
YPTB2337 3672737710
YPTB2339 3813438490
YPTB2340 3852838725
YPTB2341 3882239172
x_5 4376544016
YPTB2353 5777258326
YPTB2354 5851359178
45888contig_0002059801YPTB0548 1068111556 EMBL GBK
YPTB0532 2517326267
YPTB0531 2654828059
YPTB0530 2816228611
YPTB0523 3709338142
45764contig_0002159463YPTB3313 90719538 EMBL GBK
YPTB2283 1237513649
YPTB2275 2210223094
YPTB2274 2309423984
YPTB2273 2397124936
YPTB2266 3009831495
YPTB2263 3313733583
YPTB2261 3557536078
45870contig_0002258396YPTB1531 5611814 EMBL GBK
x_6 2019920786
YPTB3921 2669327049
YPTB3920 2939629950
YPTB3916 3490936978
YPTB3915 3698837902
YPTB3914 3846439036
45975contig_0002356917YPTB3017 64887405 EMBL GBK
YPTB3012 1172812573
YPTB3003 2382124546
YPTB2998 2877129529
YPTB2997 2953930387
YPTB2994 3432134869
YPTB2993 3487335895
YPTB2987 4278443743
YPTB2978 5008751805
YPTB2977 5203452741
YPTB2975 5329354108
YPTB2974 5418454837
YPTB2973 5483055861
45909contig_0002454193YPTB1212 45435529 EMBL GBK
YPTB1209 85299635
YPTB1192 1107211317
YPTB2609 3123031916
YPTB2612 3388635403
YPTB2613 3541635925
YPTB2617 3934040002
YPTB3790 4095941969
45803contig_0002552109YPTB3416 94339648 EMBL GBK
YPTB3413 1195012309
YPTB3407 1996421394
YPTB3398 2993630361
YPTB3396 3125831839
YPTB3395 3187533770
45914 contig_00026 49741
45846contig_0002749304YPTB2144 32493851 EMBL GBK
YPTB2146 51375448
YPTB2147 54556624
YPTB2156 1299215058
YPTB2160 1999420635
YPTB2167 2699427575
45793contig_0002847541YPTB2714 1361614584 EMBL GBK
YPTB2715 1504515302
YPTB2716 1535017077
45915contig_0002942737YPTB2797 4651010 EMBL GBK
YPTB2794 31923818
YPTB2789 85059569
YPTB2785 968310153
YPTB2781 1291813631
YPTB2779 1477915231
YPTB2775 1896520092
YPTB2761 3318333449
45856contig_0003042154YPTB2915 86638869 EMBL GBK
YPTB1144 2092921276
YPTB1145 2127723043
YPTB1146 2309823814
YPTB1147 2414926956
YPTB1149 2832029486
YPTB1155 3619736598
YPTB1157 3729737725
YPTB1159 3908540377
45809 contig_00033 41743
45896contig_0003440875YPTB1091 2642527390 EMBL GBK
YPTB1096 3163032742
YPTB1097 3276534660
YPTB1098 3473535205
YPTB1103 3814140723
45858contig_0003540821YPTB0583 1789319116 EMBL GBK
YPTB0577 2543125592
YPTB0576 2567126285
YPTB0574 2841928862
YPTB0573 2880729244
45780contig_0003640578YPTB2640 3100531769 EMBL GBK
YPTB2637 3487736187
45850contig_0003739861YPTB0485 24613345 EMBL GBK
YPTB0483 58856154
YPTB0481 72217631
YPTB0478 1190912367
YPTB0476 1344914789
YPTB0475 1479915632
YPTB0473 1776218391
YPTB0472 1853918832
YPTB0471 1896119437
YPTB0470 1969821146
YPTB0465 2597926236
YPTB0464 2625626567
YPTB0463 2682727798
45978contig_0003839584YPTB3023 1161441 EMBL GBK
YPTB3033 1614616940
YPTB3034 1694717819
YPTB3035 1806720313
YPTB3036 2032620853
YPTB3042 2666528821
45971 contig_00039 38689
45953contig_0004034526YPTB2594 83518845 EMBL GBK
YPTB2595 89469401
YPTB2597 980411006
YPTB2600 1510115544
YPTB2601 1558715874
YPTB2602 1588717143
YPTB1172 2277623594
YPTB1169 2599527146
YPTB1166 2894929701
45859contig_0004133354YPTB1253 2424725377 EMBL GBK
45921 contig_00042 33226
45891contig_0004331583YPTB2872 29923330 EMBL GBK
YPTB2873 33464968
YPTB2886 2427824658
YPTB2887 2465825389
YPTB2889 2627827189
YPTB2890 2718627866
45979 contig_00044 31539
45895contig_0004531219YPTB3649 892010566 EMBL GBK
45781 contig_00046 30862
45828contig_0004730472YPTB3791 15212114 EMBL GBK
45956 contig_00048 29578
45808contig_0004929164YPTB0734 1075611211 EMBL GBK
YPTB0731 1388414363
YPTB0726 1879819568
YPTB0723 2155222088
YPTB0719 2539626190
45836contig_0005029094YPTB2312 76658411 EMBL GBK
x_4 2367523764
45785contig_0005128875YPTB0970 85038964 EMBL GBK
YPTB0966 1308513783
YPTB0963 1514817034
YPTB0962 1733717609
YPTB0960 2037621647
YPTB0959 2187622499
YPTB0958 2297324277
YPTB0955 2538325961
45842contig_0005228289YPTB0616 41905128 EMBL GBK
YPTB0620 89719924
YPTB0622 1032411145
YPTB0632 2004420421
YPTB0633 2043521253
45814contig_0005327672YPTB1034 48865380 EMBL GBK
YPTB1029 1032711013
YPTB1027 1167612452
YPTB1025 1369814612
45897contig_0005427062YPTB0994 37794384 EMBL GBK
YPTB0993 43844716
YPTB0990 76077987
YPTB0981 2369923842
45801contig_0005527001YPTB3840 1909619998 EMBL GBK
45886contig_0005625641x_1 1394115350 EMBL GBK
YPTB0028 1968220119
45818contig_0005725614YPTB0887 1520316546 EMBL GBK
YPTB0889 1778118581
YPTB0890 1857419203
YPTB0892 1982221045
YPTB0894 2213322360
45916 contig_00058 25496
45913contig_0005925206YPTB1119 981710617 EMBL GBK
YPTB1116 1310613858
YPTB1110 2164722525
45946contig_0003124941YPTB0930 16183465 EMBL GBK
YPTB0925 73777979
YPTB0920 1476516084
45821contig_0006024567YPTB1921 1640916939 EMBL GBK
45931 contig_00061 24311
45831 contig_00062 23661
45864contig_0006323386YPTB0851 27375379 EMBL GBK
YPTB0857 1282013332
YPTB0858 1350413845
YPTB0873 1716618326
YPTB0876 1988020422
45966contig_0006422956YPTB1647 945910823 EMBL GBK
45788contig_0006522401YPTB2942 13243042 EMBL GBK
YPTB2940 39784664
YPTB2929 1641316760
45893contig_0006622334YPTB2967 43375092 EMBL GBK
YPTB2966 52745993
YPTB2965 60096473
45960contig_0006720715YPTB3479 24673771 EMBL GBK
YPTB3478 43775786
YPTB3476 74518941
45857contig_0006820206YPTB0037 81388761 EMBL GBK
YPTB0033 1191113992
45889contig_0006920012YPTB0003 1440315395 EMBL GBK
YPTB0002 1557916040
45851 contig_00070 19666
45804contig_0007119480YPTB2585 19503746 EMBL GBK
YPTB2581 85279504
YPTB2580 951910061
YPTB2578 1061610918
YPTB2577 1091512759
45906contig_0007219055YPTB0282 89579325 EMBL GBK
YPTB0280 1025210956
YPTB0279 1096011388
YPTB0278 1156512110
YPTB0277 1211212495
45902 contig_00073 19045
45786contig_0007418693YPTB2139 48545105 EMBL GBK
YPTB2137 64207181
45768contig_0007518545YPTB0951 10353026 EMBL GBK
YPTB0950 30163630
YPTB0936 1546515881
YPTB0934 1651317622
YPTB0933 1770118150
45880contig_0007618519YPTB1297 36843911 EMBL GBK
45927contig_0007718232YPTB0604 58587147 EMBL GBK
YPTB0603 71518080
YPTB0599 1319414060
YPTB0598 1405714704
45824contig_0007818199YPTB2869 16342887 EMBL GBK
YPTB2859 1020411433
YPTB2857 1196712290
YPTB2885 1497515310
YPTB2853 1531215512
45918 contig_00079 17860
45873 contig_00080 17274
45928contig_0008117188YPTB0137 28324682 EMBL GBK
YPTB0134 60827728
YPTB0132 1012510463
45848contig_0003216995YPTB1795 15862497 EMBL GBK
YPTB0903 1360514006
45876contig_0008216918YPTB2116 191487 EMBL GBK
YPTB2125 77848590
YPTB2126 85909780
45817contig_0008316570YPTB0121 56867086 EMBL GBK
45908 contig_00084 15703
45834 contig_00085 15394
45779contig_0008614875YPTB0296 48175407 EMBL GBK
45939contig_0008714787YPTB2558 51946051 EMBL GBK
YPTB2557 60517022
45802contig_0008814674YPTB3847 1093811528 EMBL GBK
45980 contig_00089 14466
45763 contig_00090 13815
45810contig_0009113751YPTB3491 58546558 EMBL GBK
YPTB3488 88839278
YPTB3485 1020310508
45919 contig_00092 12683
45883contig_0009312647YPTB0494 1062811506 EMBL GBK
45772contig_0009412626YPTB1940 962710154 EMBL GBK
45800contig_0009512096YPTB0373 719937 EMBL GBK
YPTB0370 37794387
45879 contig_00096 11402
45847contig_0009710970YPTB0842 21613282 EMBL GBK
45934contig_0009810789YPTB1535 24153527 EMBL GBK
YPTB1537 48025383
45935 contig_00099 10682
45823 contig_00100 10520
45771 contig_00101 10139
45840contig_001029911YPTB1125 13211848 EMBL GBK
45932 contig_00103 9724
45837 contig_00104 9369
45887contig_001058616YPTB2632 12872372 EMBL GBK
YPTB2630 32274033
45967 contig_00106 8489
45832 contig_00107 8219
45894contig_001088201YPTB1135 19662460 EMBL GBK
YPTB1141 66827260
45825 contig_00109 8138
45769contig_001107905YPTB2895 8991855 EMBL GBK
YPTB2897 25363111
45951 contig_00111 7855
45806 contig_00112 7725
45833 contig_00113 7090
45813 contig_00114 7071
45904 contig_00115 7019
45884 contig_00116 6793
45791 contig_00117 6161
45827 contig_00118 5946
45923 contig_00119 5805
45942 contig_00120 5661
45838 contig_00121 5639
45961 contig_00122 5620
45787contig_001255490t3c_1 17582390 EMBL GBK
45944 contig_00126 5350
45783contig_001275270YPTB2389 17081941 EMBL GBK
45949 contig_00128 5240
45855 contig_00129 5115
45820 contig_00130 4927
45938 contig_00131 4805
45940 contig_00132 4740
45903 contig_00133 4675
45929 contig_00134 4513
45849contig_001354496x_3 9421055 EMBL GBK
YPTB1615 12941680
45950 contig_00136 4339
45777 contig_00137 4031
45976 contig_00138 3745
45854 contig_00139 3681
45790 contig_00140 3664
45900 contig_00141 3636
45799 contig_00142 3547
45805 contig_00143 3458
45794 contig_00144 3447
45965 contig_00145 3438
45865contig_001463413YPTB1105 22747 EMBL GBK
YPTB1106 7471421
45947 contig_00147 3411
45941 contig_00148 3387
45792 contig_00123 3367
45875 contig_00149 3356
45899 contig_00150 3300
45815 contig_00151 3257
45920 contig_00152 3184
45844 contig_00153 3134
45830 contig_00155 3122
45964 contig_00156 3058
45784 contig_00157 3047
45819 contig_00154 2979
45926 contig_00158 2943
45789 contig_00159 2897
45767 contig_00160 2689
45955 contig_00161 2668
45863 contig_00162 2630
45958 contig_00163 2548
45937 contig_00164 2531
45835 contig_00165 2304
45957 contig_00166 2286
45829 contig_00167 2118
45853 contig_00168 2072
45766 contig_00169 1975
45775 contig_00170 1974
45874 contig_00171 1877
45871 contig_00172 1862
45959 contig_00124 1787
45782contig_001731639YPTB0979 511879 EMBL GBK
45867 contig_00174 1629
45977 contig_00175 1601
45943 contig_00176 1574
45845 contig_00177 1534
45843 contig_00178 1450
45973 contig_00179 1432
45860 contig_00180 1389
45968 contig_00181 1388
45798 contig_00182 1329
45885 contig_00183 1296
45822 contig_00185 1256
45907contig_001861149YPTB1309 321905 EMBL GBK
45952 contig_00184 1125
45839 contig_00187 1122
45911 contig_00188 1069
45936 contig_00189 1034
45765 contig_00190 1009
45901 contig_00191 960
45877 contig_00192 943
45816 contig_00193 929
45778 contig_00195 828
45795 contig_00196 818
45912 contig_00197 752
45866 contig_00198 741
45797 contig_00200 699
45974 contig_00194 693
45869 contig_00202 554
45917 contig_00199 547
45954 contig_00203 514
45881 contig_00204 511
45774 contig_00206 471
45892 contig_00201 467
45826 contig_00208 414
45962 contig_00211 388
45812 contig_00213 374
45910 contig_00212 374
45841 contig_00214 366
45963 contig_00205 353
45945 contig_00215 347
45924 contig_00216 314
45922 contig_00207 285
45925 contig_00209 248
45852 contig_00210 242
45862 contig_00217 226
45933 contig_00218 219