Sequence bin for IP08619

Contig summary statistics

Contigs
133
Total length
4,405,218
Minimum length
224
Maximum length
215,006
Mean length
33,122
N50
106,547
L50
15
N90
24,855
L90
49
N95
15,586
L95
59

FASTAEMBLGBKGFF3

SequenceSequencing methodOriginal designationLengthCommentsLocusStartEndDirectionAnnotation
39339contig_00001215006YPTB1297 25782805 EMBL GBK
YPTB1309 1753618120
YPTB1316 2527925851
YPTB1330 3383834776
YPTB1358 6466764930
YPTB1361 6648067589
YPTB1362 6775168884
YPTB1376 7526275978
YPTB1377 7599076721
YPTB1386 8636588017
YPTB1391 9353895487
YPTB1394 9665998935
YPTB1395 9918599403
YPTB1397 100619102343
YPTB1403 111032112375
YPTB1408 116292118574
YPTB1414 123537124622
YPTB1416 126432127124
YPTB1417 127293128966
YPTB1428 141697143019
YPTB1436 156746158146
YPTB1439 163190164200
YPTB1442 166320168440
YPTB1445 171952173604
YPTB1454 179500180006
39276contig_00002205932YPTB2714 78618829 EMBL GBK
YPTB2715 92839540
YPTB2716 958811315
YPTB2761 3499835264
YPTB2775 4211543242
YPTB2779 4623046682
YPTB2781 4792548638
YPTB2785 5161852088
YPTB2789 5229653360
YPTB2794 5790658532
YPTB2797 6086761412
YPTB2799 6144562257
YPTB2819 9526495602
YPTB2838 122307123488
YPTB2853 143536143736
YPTB2885 143882144217
YPTB2857 146960147283
YPTB2859 147804149033
YPTB2869 156320157573
YPTB2872 164362164700
YPTB2873 164715166337
YPTB2886 185720186100
YPTB2887 186100186831
YPTB2889 187733188644
YPTB2890 188641189321
YPTB2895 194127195083
YPTB2897 195765196340
39318contig_00003189641YPTB3395 2214224037 EMBL GBK
YPTB3396 2409824679
YPTB3398 2557225997
YPTB3407 3475036180
YPTB3413 4382544184
YPTB3416 4657446789
YPTB3476 6724968739
YPTB3478 7031971728
YPTB3479 7222173525
YPTB3485 7753177836
YPTB3488 7881579210
YPTB3491 8144782151
YPTB3498 9030590958
YPTB3503 100150101568
YPTB3506 102902103543
YPTB3508 104325104753
YPTB3510 106424106828
YPTB3518 113011113793
YPTB3523 117606118169
YPTB3524 118153118698
YPTB3525 118705119430
YPTB3526 119489120922
YPTB3527 120946121233
YPTB3528 121355121837
YPTB3531 123556124491
YPTB3533 125262125648
YPTB3536 127442128857
YPTB3538 143692144102
YPTB3547 151331152266
YPTB3548 152274152477
YPTB3549 152825153736
YPTB3558 153797155242
YPTB3561 160233161702
YPTB3563 162299162787
YPTB3565 163847164890
YPTB3570 170548171000
YPTB3574 173294174748
39353contig_00004181006YPTB2354 82828947 EMBL GBK
YPTB2353 91529706
x_5 2332923580
YPTB2341 2840428754
YPTB2340 2885029047
YPTB2339 2908629442
YPTB2337 2990630889
YPTB2336 3090433291
YPTB2324 4431544701
YPTB2323 4481745281
YPTB2322 4538646402
YPTB2312 6564266388
x_4 8237382462
YPTB3313 9533895805
YPTB2283 98746100020
YPTB2275 108851109843
YPTB2274 109843110733
YPTB2273 110720111685
YPTB2266 118027119424
YPTB2263 121055121501
YPTB2261 123482123985
39315contig_00005170102YPTB0990 26473027 EMBL GBK
YPTB0981 1666616809
YPTB0979 2052420892
YPTB0970 2984930310
YPTB0966 3454135239
YPTB0963 3661338499
YPTB0962 3881439086
YPTB0960 4185343124
YPTB0959 4336443987
YPTB0958 4447745781
YPTB0955 4688647464
YPTB0951 5138953380
YPTB0950 5337053984
YPTB0936 6608366499
YPTB0934 6713268241
YPTB0933 6834268791
YPTB0930 6999871845
YPTB0925 7552876130
YPTB0920 8317184490
YPTB1795 9453695447
YPTB0903 114847115248
YPTB0894 124356124583
YPTB0892 125657126880
YPTB0890 127499128128
YPTB0889 128121128921
YPTB0887 130156131499
YPTB0876 150381150923
YPTB0873 152440153600
YPTB0858 156615156956
YPTB0857 157128157640
YPTB0851 164997167639
39257contig_00006153082YPTB3961 25123399 EMBL GBK
YPTB3960 34984274
YPTB3950 1554016739
YPTB3947 2000520262
YPTB3946 2022620585
YPTB3945 2060420744
YPTB3942 2283923939
YPTB3940 2504827462
YPTB3914 4664847220
YPTB3915 4747848392
YPTB3916 4840250471
YPTB3920 5582156375
YPTB3921 5868759043
x_6 6479265379
YPTB3847 106082106672
YPTB3840 113569114471
39375contig_00007152525YPTB3230 921110731 EMBL GBK
YPTB1524 1075211762
YPTB1531 3696938222
YPTB1535 4297244084
YPTB1537 4507545656
YPTB1555 5511555729
YPTB1557 5648157218
YPTB1558 5722457814
YPTB1559 5781458881
x_2 6788468099
39313contig_00008141658YPTB2090 39785024 EMBL GBK
YPTB2089 52675818
YPTB2084 1004610459
YPTB2083 1093211927
YPTB2064 3340834064
YPTB2060 3734338155
YPTB2059 3815938428
YPTB2053 4537445718
YPTB2047 5114352585
YPTB2045 5371455030
YPTB2042 5683857623
YPTB2038 6193762680
YPTB2032 6880769778
YPTB2023 7695277536
YPTB2019 8057381310
YPTB2009 8775288606
YPTB2008 8882189630
YPTB2007 8962790028
YPTB2005 9094392025
YPTB2001 9538396330
39364contig_00009136662YPTB0703 65457588 EMBL GBK
YPTB0701 85129264
YPTB0693 1524516396
YPTB0692 1646917725
YPTB0690 1858119501
YPTB0685 2466525747
YPTB0671 4335644453
inv (inv) 7800381077
YPTB0633 9133192149
YPTB0632 9216392540
YPTB0622 101462102283
YPTB0620 102614103567
YPTB0616 107392108330
YPTB0604 120863122152
YPTB0603 122156123085
YPTB0599 128178129044
YPTB0598 129041129688
39280contig_00010134156YPTB3660 10271848 EMBL GBK
YPTB3663 30153488
YPTB3665 47155227
YPTB3668 78359211
YPTB3674 1252613146
YPTB3675 1317713566
YPTB3676 1358313939
YPTB3677 1408714203
YPTB3678 1423715568
YPTB3679 1557716011
YPTB3680 1601516194
YPTB3681 1619716700
YPTB3682 1671517068
YPTB3683 1707817611
YPTB3684 1762618018
YPTB3685 1805218357
YPTB3686 1837118910
YPTB3687 1892519239
YPTB3688 1925019621
YPTB3690 2004120232
YPTB3691 2023220642
YPTB3692 2065521353
YPTB3693 2137121703
YPTB3694 2171821996
YPTB3695 2201122835
YPTB3696 2285223154
YPTB3697 2315123756
YPTB3698 2377324402
YPTB3699 2443524746
YPTB3704 2947129941
YPTB3705 3003830412
YPTB3706 3054930836
YPTB3709 3161932341
YPTB3711 3374233960
YPTB3714 3497936787
YPTB3725 4457644812
YPTB3729 4687547507
YPTB3732 4908249657
YPTB3734 5132451893
YPTB3746 6788168558
YPTB3750 7192372444
YPTB3760 8362784034
YPTB3764 8872489443
YPTB3786 119247121235
39374contig_00011121438YPTB0532 52606354 EMBL GBK
YPTB0531 66348145
YPTB0530 83208769
YPTB0523 1734318392
YPTB0494 4323844116
YPTB0485 4885649740
YPTB0483 5244452713
YPTB0481 5380154211
YPTB0478 5848958947
YPTB0476 6005361393
YPTB0475 6140362236
YPTB0473 6454965178
YPTB0472 6532565618
YPTB0471 6574766223
YPTB0470 6648367931
YPTB0465 7197372230
YPTB0464 7225072561
YPTB0463 7282173792
YPTB0450 8857889909
YPTB0444 9631596935
YPTB0441 9861999071
YPTB0440 9911199338
YPTB0439 9934399663
YPTB0438 99669100061
YPTB0425 112727113032
YPTB0424 113149114090
39335contig_00012121178YPTB2116 44774773 EMBL GBK
YPTB2125 1149012296
YPTB2126 1229613486
YPTB2137 2222022981
YPTB2139 2432024571
YPTB2144 3330333905
YPTB2146 3519935510
YPTB2147 3551736686
YPTB2156 4293244998
YPTB2160 5005150692
YPTB2167 5710257683
39269contig_00013120918YPTB0270 9012352 EMBL GBK
YPTB0267 46286817
YPTB0266 68297992
YPTB0265 80968797
YPTB0264 885210372
YPTB0262 1118512207
YPTB0261 1222213004
YPTB0250 2362324384
YPTB0247 2832729280
YPTB0240 3327034115
YPTB0229 4372844495
YPTB0228 4449245778
YPTB0227 4577546701
YPTB0224 4889149748
YPTB0222 5098951657
YPTB0219 5409254364
YPTB0193 8401284728
YPTB0190 8649287316
YPTB0182 9294994073
YPTB0177 101257102342
YPTB0171 107737108999
YPTB0167 112696113955
YPTB0166 114537114863
39321contig_00014109362YPTB3743 1054511963 EMBL GBK
YPTB0765 1197412882
YPTB0768 1522815545
YPTB0774 2191722543
YPTB0833 9132192682
YPTB0834 9291093158
YPTB0835 9318293730
YPTB0842 100118101239
39328contig_00015106547YPTB1159 18983190 EMBL GBK
YPTB1157 45925020
YPTB1155 57196120
YPTB1149 1316314329
YPTB1147 1568718494
YPTB1146 1876219478
YPTB1145 1951721283
YPTB1144 2128421631
YPTB2915 3333533541
YPTB1125 4879149318
YPTB1119 6024361043
YPTB1116 6379064542
YPTB1110 7223473112
YPTB1106 7786878542
YPTB1105 7854279267
YPTB1104 7932079802
YPTB1103 8016482746
YPTB1098 8568086150
YPTB1097 8624288137
YPTB1096 8816089272
YPTB1091 9333694301
39253contig_00016101382YPTB0583 1653217755 EMBL GBK
YPTB0577 2428424445
YPTB0576 2464925263
YPTB0574 2741527858
YPTB0573 2780328240
YPTB0548 8047481349
39311contig_0001793914flhD (flhD) 1491915278 EMBL GBK
flhC (flhC) 1528215863
YPTB3319 1600016887
YPTB2397 2714727536
YPTB2396 2754628190
flhB (flhB) 2859029738
flhA (flhA) 2973831816
YPTB3357 2973831816
flgN (flgN) 3255632996
flgM (flgM) 3303733336
flgA (flgA) 3348234156
YPTB3340 3436434777
flgB (flgB) 3436434777
YPTB3339 3478335187
flgC (flgC) 3478335187
flgD (flgD) 3520335895
flgE (flgE) 3605437340
flgF (flgF) 3736238117
flgG (flgG) 3814438926
flgH (flgH) 3903139744
flgI (flgI) 3975640865
flgJ (flgJ) 4088341806
flgK (flgK) 4225143918
flgL (flgL) 4403145011
fliR (fliR) 4506345845
YPTB3354 4584846117
fliQ (fliQ) 4584846117
fliP (fliP) 4612946881
fliN (fliN) 4736047776
YPTB3352 4736047776
fliM (fliM) 4776948773
fliL (fliL) 4877949249
fliI (fliI) 5129652660
fliH (fliH) 5266053382
fliG (fliG) 5337554367
YPTB3347 5337554367
fliF (fliF) 5436456073
fliE (fliE) 5635756668
fliT (fliT) 6178062142
fliS (fliS) 6215462552
fliA (fliA) 6605466776
YPTB3320 6605466776
fliZ (fliZ) 6683267341
YPTB1724 7567577159
39256contig_0001890065sycB (sycB) 4439044899 EMBL GBK
ysaU (ysaU) 4499646120
ysaS (ysaS) 4693647205
ysaR (ysaR) 4722147892
ysaQ (ysaQ) 4789848833
ysa_13 4989050345
ysaN (ysaN) 5034551637
ysaK (ysaK) 5164152048
ysaV (ysaV) 5206054132
ysaW (ysaW) 5412955238
ysaC (ysaC) 5522956923
ysaE (ysaE) 5691357593
ysa_20 5787359102
ysaJ (ysaJ) 5979760540
ysa_24 6053761085
ysaH (ysaH) 6221362689
ysa_28 6286363333
ysa_29 6333863772
ysaS (ysaS) 6448266848
yst1C (yst1C) 6874469286
yst1E (yst1E) 7132872824
yst1F (yst1F) 7282174038
yst1G (yst1G) 7407174538
yst1I (yst1I) 7511975481
yst1J (yst1J) 7547876077
yst1K (yst1K) 7606777074
yst1L (yst1L) 7707678275
yst1M (yst1M) 7826278756
ysaR (ysaR) 8403484735
39377contig_0001987834YPTB2602 1057811834 EMBL GBK
YPTB2601 1184712134
YPTB2600 1217712620
YPTB2597 1680518007
YPTB2595 1844018895
YPTB2594 1903419528
YPTB2585 2907430870
YPTB2581 3562536602
YPTB2580 3661737159
YPTB2578 3771438016
YPTB2577 3801339857
YPTB2558 5073751594
YPTB2557 5159452565
YPTB1253 7199773127
39326 contig_00020 84928
39250contig_0002180165YPTB0121 59317331 EMBL GBK
YPTB0104 3946239779
YPTB0101 4046442662
YPTB0097 4549146822
YPTB0089 4865848897
YPTB0086 5036951892
39314contig_0002272154YPTB3023 1169913024 EMBL GBK
YPTB3017 1981820735
YPTB3012 2508125926
YPTB3003 3813938864
YPTB2998 4324544003
YPTB2997 4401344861
YPTB2994 4877349321
YPTB2993 4932550347
YPTB2987 5731858277
YPTB2978 6532667044
YPTB2977 6715267859
YPTB2975 6841269227
YPTB2974 6942170074
YPTB2973 7006771098
39378contig_0002371630YPTB3225 64196691 EMBL GBK
YPTB3222 87689094
YPTB3218 1095112081
YPTB3217 1207412667
YPTB3215 1300313557
YPTB3210 1757418458
YPTB3205 2176122468
YPTB3198 3040632400
YPTB3197 3274033756
YPTB3196 3386035023
YPTB3182 4931450411
YPTB3181 5048750873
YPTB3167 6234063239
YPTB3165 6403465767
39342contig_0002465807YPTB2967 81008855 EMBL GBK
YPTB2966 89039622
YPTB2965 963810102
YPTB2942 4542547143
YPTB2940 4806248748
YPTB2929 6055460901
39273contig_0002565300YPTB2609 16722358 EMBL GBK
YPTB2612 43915908
YPTB2613 59216430
YPTB2617 1010810770
YPTB3790 1176212772
YPTB2630 3062131427
YPTB2632 3227933364
YPTB2637 3842239732
YPTB2640 4210942873
39344 contig_00026 62325
39301contig_0002757710YPTB0719 83369130 EMBL GBK
YPTB0723 1318313719
YPTB0726 1570316473
YPTB0731 2101621495
YPTB0734 2430424759
YPTB0744 4074741091
YPTB0747 4274943450
YPTB0751 5105353287
39268contig_0002850885YPTB2427 2931546 EMBL GBK
YPTB2432 47166086
YPTB2442 1578916991
YPTB2447 2197123275
YPTB2448 2365324195
39345contig_0002950664YPTB0377 1484016033 EMBL GBK
YPTB0376 1609017169
YPTB0375 1724918655
YPTB0373 2075920977
YPTB0370 2372224330
YPTB3649 3405835704
39307 contig_00030 50444
39363contig_0003146888t3c_6 57776484 EMBL GBK
YPTB0337 1242913433
39303contig_0003246573YPTB1921 1579516325 EMBL GBK
39278contig_0003342921x_1 1349414903 EMBL GBK
YPTB0028 1911719554
YPTB0033 2893331014
YPTB0037 3416434787
39333 contig_00034 41988
39309contig_0003540245YPTB2549 1493215588 EMBL GBK
39259contig_0003637616YPTB3042 1289715053 EMBL GBK
YPTB3036 1970720234
YPTB3035 2024722493
YPTB3034 2261823490
YPTB3033 2349724291
39304 contig_00037 36767
39379contig_0003833848YPTB0277 69347317 EMBL GBK
YPTB0278 73197864
YPTB0279 80588486
YPTB0280 84909194
YPTB0282 1011710485
YPTB0296 2861229202
39376contig_0003933203YPTB1166 87079459 EMBL GBK
YPTB1169 1115012301
YPTB1172 1471015528
39367contig_0004032159YPTB0003 1476915761 EMBL GBK
YPTB0002 1594516406
YPTB3973 2111621940
YPTB3971 2228822758
YPTB3970 2277323306
YPTB3969 2332124862
YPTB3966 2729027712
YPTB3965 2820629576
39310contig_0004130600YPTB1034 63806874 EMBL GBK
YPTB1029 1214512831
YPTB1027 1348314259
YPTB1025 1552216436
39349contig_0004230270YPTB0044 33723830 EMBL GBK
YPTB0047 61506386
YPTB0055 1264313575
YPTB0070 2710527803
39329contig_0004328476YPTB2389 72257458 EMBL GBK
39380contig_0004428115YPTB1647 1200413368 EMBL GBK
39332contig_0004527889YPTB0402 71918627 EMBL GBK
YPTB0404 984610139
YPTB0408 1367814244
YPTB0411 1618216574
YPTB0412 1659117325
39260contig_0004627866YPTB3791 14362029 EMBL GBK
39291contig_0004727360YPTB0137 1353615386 EMBL GBK
YPTB0134 1668718333
YPTB0132 2055620894
39368contig_0004826690YPTB2467 1255513580 EMBL GBK
YPTB2470 1603216268
YPTB2471 1642217156
YPTB2474 1909620130
YPTB2475 2016420331
39277 contig_00049 24855
39296 contig_00050 23734
39262contig_0005121614YPTB0712 1248113245 EMBL GBK
YPTB0713 1356716230
39300 contig_00052 21286
39282 contig_00053 21200
39334 contig_00054 20082
39271contig_0005519827YPTB1615 1822118607 EMBL GBK
x_3 1884818961
39324contig_0005619770YPTB1940 94709997 EMBL GBK
39284contig_0005719092YPTB1192 79148159 EMBL GBK
YPTB1209 958510691
YPTB1212 1365914645
39346 contig_00058 18079
39343contig_0005915586YPTB0994 979210397 EMBL GBK
YPTB0993 1039710729
39286 contig_00060 13071
39354 contig_00061 12970
39292 contig_00062 11446
39312 contig_00063 9246
39372 contig_00064 8999
39265 contig_00065 8907
39330 contig_00066 8701
39370contig_000678190YPTB1141 17822360 EMBL GBK
YPTB1135 65867080
39308 contig_00068 8110
39327 contig_00069 7665
39305 contig_00070 7026
39274 contig_00071 6647
39340 contig_00072 6547
39336 contig_00073 5569
39320 contig_00076 5325
39351 contig_00077 5317
39288 contig_00078 5026
39347 contig_00079 5020
39316 contig_00080 4836
39352 contig_00081 4378
39317 contig_00082 4360
39283 contig_00083 4154
39341 contig_00084 4113
39295 contig_00085 3674
39258 contig_00086 3200
39263 contig_00074 2943
39359 contig_00087 2552
39272 contig_00088 2360
39381 contig_00089 2312
39249 contig_00090 2062
39279 contig_00091 2007
39348 contig_00092 1941
39251 contig_00075 1749
39322 contig_00093 1710
39255 contig_00094 1363
39270 contig_00095 1316
39319 contig_00096 1297
39302 contig_00097 1243
39356 contig_00098 1052
39357 contig_00099 952
39287 contig_00100 935
39254 contig_00101 935
39299 contig_00102 847
39355 contig_00103 839
39297 contig_00104 823
39325 contig_00105 771
39373 contig_00106 771
39293 contig_00107 677
39331 contig_00108 583
39289 contig_00109 554
39252 contig_00110 553
39366 contig_00111 519
39275 contig_00112 499
39294 contig_00113 477
39281 contig_00114 458
39338 contig_00115 435
39323 contig_00116 426
39266 contig_00117 422
39290 contig_00118 415
39350 contig_00119 401
39361 contig_00120 393
39371 contig_00122 388
39298 contig_00121 385
39267 contig_00123 353
39369 contig_00124 341
39264 contig_00125 336
39362 contig_00126 333
39261 contig_00127 327
39365 contig_00128 301
39306 contig_00129 299
39285 contig_00130 294
39358 contig_00131 290
39360 contig_00132 239
39337 contig_00133 224