Sequence bin for IP07971

Contig summary statistics

Contigs
221
Total length
4,349,939
Minimum length
202
Maximum length
168,883
Mean length
19,683
N50
39,279
L50
30
N90
11,591
L90
101
N95
7,298
L95
125

FASTAEMBLGBKGFF3

SequenceSequencing methodOriginal designationLengthCommentsLocusStartEndDirectionAnnotation
38372contig_00001168883YPTB2167 25663147 EMBL GBK
YPTB2160 967010311
YPTB2156 1536317429
YPTB2147 2368424853
YPTB2146 2486025171
YPTB2144 2646527067
YPTB2139 3717037421
YPTB2137 3876239523
YPTB2126 4825849448
YPTB2125 4944850254
YPTB2116 5696357259
YPTB2090 8747388519
YPTB2089 8876289313
YPTB2084 9356593978
YPTB2083 9432695321
YPTB2064 116808117464
YPTB2060 120752121564
YPTB2059 121568121837
YPTB2053 128778129122
YPTB2047 134440135882
YPTB2045 137011138327
YPTB2042 140135140920
YPTB2038 145234145977
YPTB2032 151913152884
YPTB2023 160054160638
YPTB2019 163678164415
38272contig_00002132060YPTB3574 1337814832 EMBL GBK
YPTB3570 1712917581
YPTB3565 2322524268
YPTB3563 2532825816
YPTB3561 2641327882
YPTB3558 3280234247
YPTB3549 3430835219
YPTB3548 3556735770
YPTB3547 3577836713
YPTB3538 4394144351
YPTB3536 5893260347
YPTB3533 6214262528
YPTB3531 6329964234
YPTB3528 6595366435
YPTB3527 6655766844
YPTB3526 6686868301
YPTB3525 6836069085
YPTB3524 6909269637
YPTB3523 6962170184
YPTB3518 7399774779
YPTB3510 8095781361
YPTB3508 8303283460
YPTB3506 8424284883
YPTB3503 8621787635
YPTB3498 9666597318
YPTB3491 107993108697
YPTB3488 110835111230
YPTB3485 112208112513
YPTB3479 116519117823
YPTB3478 118325119734
YPTB3476 121314122804
38345contig_00003119564YPTB1172 1756618384 EMBL GBK
YPTB1169 2079321944
YPTB1166 2363524387
YPTB1159 3517236464
YPTB1157 3786638294
YPTB1155 3899339394
YPTB1149 4625147417
YPTB1147 4877551582
YPTB1146 5185052566
YPTB1145 5260554371
YPTB1144 5437254719
YPTB2915 6642366629
YPTB1125 8178982316
YPTB1119 9316793967
YPTB1116 9667197423
YPTB1110 105123106001
YPTB1106 110686111360
YPTB1105 111360112085
YPTB1104 112138112620
YPTB1103 112982115564
38398contig_00004111411YPTB0132 64736811 EMBL GBK
YPTB0134 903410680
YPTB0137 1199713847
YPTB0166 3407634402
YPTB0167 3498436243
YPTB0171 3993441196
YPTB0177 4650047585
YPTB0182 5464855772
YPTB0190 6130162125
YPTB0193 6389064606
YPTB0219 9384494116
YPTB0222 9655197219
YPTB0224 9844899305
YPTB0227 101516102442
YPTB0228 102439103725
YPTB0229 103722104489
38339contig_00005110997YPTB3660 10281849 EMBL GBK
YPTB3663 30163489
YPTB3665 47155227
YPTB3668 78359211
YPTB3674 1252913149
YPTB3675 1318013569
YPTB3676 1358613942
YPTB3677 1409014206
YPTB3678 1424015571
YPTB3679 1557916013
YPTB3680 1601716196
YPTB3681 1619916702
YPTB3682 1671717070
YPTB3683 1708017613
YPTB3684 1762818020
YPTB3685 1805418359
YPTB3686 1837318912
YPTB3687 1892719241
YPTB3688 1925219623
YPTB3690 2004320234
YPTB3691 2023420644
YPTB3692 2065721355
YPTB3693 2137321705
YPTB3694 2172021998
YPTB3695 2201322837
YPTB3696 2285423156
YPTB3697 2315323758
YPTB3698 2377524404
YPTB3699 2443724748
YPTB3704 2947329943
YPTB3705 3004030414
YPTB3706 3055130838
YPTB3709 3162132343
YPTB3711 3374333961
YPTB3714 3497436782
YPTB3725 4448944725
YPTB3729 4657047202
YPTB3732 4877749352
YPTB3734 5102151590
YPTB3746 6746468141
YPTB3750 7150672027
YPTB3760 8321083617
YPTB3764 8813888857
38241contig_00006102165YPTB0970 84478908 EMBL GBK
YPTB0966 1313913837
YPTB0963 1519517081
YPTB0962 1739617668
YPTB0960 2043521706
YPTB0959 2194622569
YPTB0958 2304824352
YPTB0955 2545826036
YPTB0951 2996131952
YPTB0950 3194232556
YPTB0936 4447044886
YPTB0934 4551946628
YPTB0933 4672947178
YPTB0930 4838550232
YPTB0925 5391654518
YPTB0920 6158962908
YPTB1795 7294873859
YPTB0903 9322293623
38438contig_0000792843inv (inv) 3303404 EMBL GBK
YPTB0633 1379014608
YPTB0632 1462214999
YPTB0622 2392724748
YPTB0620 2507926032
YPTB0616 2985730795
YPTB0604 4333144620
YPTB0603 4462445553
YPTB0599 5064651512
YPTB0598 5150952156
YPTB0583 7561476837
YPTB0577 8336583526
YPTB0576 8373084344
YPTB0574 8643686879
YPTB0573 8682487261
38335contig_0000889920YPTB2261 7351574018 EMBL GBK
YPTB2263 7599776443
YPTB2266 7807579472
YPTB2273 8581786782
YPTB2274 8676987659
YPTB2275 8765988651
38416contig_0000980864flhD (flhD) 6891048 EMBL GBK
flhC (flhC) 10521633
YPTB3319 17702657
YPTB2397 1298313372
YPTB2396 1338214026
flhB (flhB) 1442615574
flhA (flhA) 1557417652
YPTB3357 1557417652
flgN (flgN) 1839118831
flgM (flgM) 1887219171
flgA (flgA) 1931719991
YPTB3340 2019920612
flgB (flgB) 2019920612
YPTB3339 2061821022
flgC (flgC) 2061821022
flgD (flgD) 2103821730
flgE (flgE) 2188923175
flgF (flgF) 2319723952
flgG (flgG) 2397924761
flgH (flgH) 2486625579
flgI (flgI) 2559126700
flgJ (flgJ) 2671827641
flgK (flgK) 2794729614
flgL (flgL) 2972730707
fliR (fliR) 3075931541
YPTB3354 3154431813
fliQ (fliQ) 3154431813
fliP (fliP) 3182532577
fliN (fliN) 3305633472
YPTB3352 3305633472
fliM (fliM) 3346534469
fliL (fliL) 3447534945
fliI (fliI) 3699238356
fliH (fliH) 3835639078
fliG (fliG) 3907140063
YPTB3347 3907140063
fliF (fliF) 4006041769
fliE (fliE) 4205342364
fliT (fliT) 4746747829
fliS (fliS) 4784148239
fliA (fliA) 5174152463
YPTB3320 5174152463
fliZ (fliZ) 5251953028
YPTB1724 6135862842
38276contig_0001078802x_6 1377414361 EMBL GBK
YPTB3921 2011020466
YPTB3920 2290123455
YPTB3916 2875630825
YPTB3915 3083531749
YPTB3914 3200632578
YPTB3940 5153553949
YPTB3942 5505856158
YPTB3945 5825258392
YPTB3946 5841158770
YPTB3947 5873458991
YPTB3950 6225763456
YPTB3960 7428275058
YPTB3961 7515776044
38437contig_0001178446YPTB2838 80219202 EMBL GBK
YPTB2853 2926729467
YPTB2885 2961229947
YPTB2857 3269533018
YPTB2859 3353934768
YPTB2869 4205343306
YPTB2872 5009650434
YPTB2873 5044952071
YPTB2886 7138171761
YPTB2887 7176172492
YPTB2889 7339474305
YPTB2890 7430274982
38365contig_0001278373YPTB2427 82469499 EMBL GBK
YPTB2432 1267814048
YPTB2442 2375124953
YPTB2447 2993331237
YPTB2448 3161532157
YPTB2467 4005041075
YPTB2470 4352743763
YPTB2471 4391744651
YPTB2474 4659147625
YPTB2475 4765947826
38261contig_0001377332YPTB3165 73309063 EMBL GBK
YPTB3167 985810757
YPTB3181 2222322609
YPTB3182 2268523782
YPTB3196 3780538968
YPTB3197 3907140087
YPTB3198 4042742421
YPTB3205 5036551072
YPTB3210 5425255136
YPTB3215 5915359707
YPTB3217 6004360636
YPTB3218 6062961759
YPTB3222 6361663942
YPTB3225 6601966291
38349contig_0001476590YPTB3023 2002121346 EMBL GBK
YPTB3017 2795928876
YPTB3012 3322134066
YPTB3003 4257843303
YPTB2998 4768548443
YPTB2997 4845349301
YPTB2994 5321353761
YPTB2993 5376554787
YPTB2987 6174762706
YPTB2978 6976371481
YPTB2977 7158972296
YPTB2975 7284873663
YPTB2974 7385774510
YPTB2973 7450375534
38357contig_0001572590YPTB1358 84998762 EMBL GBK
YPTB1361 1031211421
YPTB1362 1158612719
YPTB1376 1834119057
YPTB1377 1906919800
YPTB1386 2944631098
YPTB1391 3661938568
YPTB1394 3974042016
YPTB1395 4226642484
YPTB1397 4370045424
YPTB1403 5415955502
YPTB1408 5941961701
YPTB1414 6666567750
YPTB1416 6943470126
YPTB1417 7029571968
38235contig_0001666207YPTB3840 3848139383 EMBL GBK
YPTB3847 4622546815
38328contig_0001762917YPTB1535 34384550 EMBL GBK
YPTB1537 54466027
YPTB1555 1547416088
YPTB1557 1684017577
YPTB1558 1758318173
YPTB1559 1817319240
x_2 2827128486
38238contig_0001862256YPTB1454 1159812104 EMBL GBK
YPTB1445 1800519657
YPTB1442 2316925289
YPTB1439 2740928419
YPTB1436 3346434864
YPTB1428 4859049912
38440contig_0001958988YPTB0774 1658517211 EMBL GBK
YPTB0768 2358423901
YPTB0765 2624727155
YPTB3743 2716628584
YPTB0751 4319645430
YPTB0747 5303453735
YPTB0744 5539355737
38355contig_0002051710YPTB0033 73299410 EMBL GBK
YPTB0037 1256013183
YPTB0044 2454225000
YPTB0047 2732027556
YPTB0055 3381334745
YPTB0070 4814048838
38229contig_0002151011YPTB2322 1119812214 EMBL GBK
YPTB2323 1231912783
YPTB2324 1289913285
YPTB2336 2431026697
YPTB2337 2671227695
YPTB2339 2815928515
YPTB2340 2855428751
YPTB2341 2884729197
x_5 3402134272
YPTB2353 4790748461
YPTB2354 4866649331
38337contig_0002249927YPTB2283 75458819 EMBL GBK
YPTB3313 1176312230
x_4 2507225161
YPTB2312 4116341909
38443 contig_00023 48699
38377contig_0002447270YPTB3416 1132811543 EMBL GBK
YPTB3413 1380514164
YPTB3407 2187223302
YPTB3398 3071431139
YPTB3396 3203232613
YPTB3395 3267434569
38268 contig_00025 44188
38382contig_0002640973YPTB0685 1547216554 EMBL GBK
YPTB0690 2171222632
YPTB0692 2348824744
YPTB0693 2481725968
YPTB0701 3174232494
YPTB0703 3342234465
38313contig_0002740551YPTB1034 1237812872 EMBL GBK
YPTB1029 1794218628
YPTB1027 1928020056
YPTB1025 2119422108
38258contig_0002839512YPTB2558 57496606 EMBL GBK
YPTB2557 66067577
YPTB1253 2719728327
38383contig_0002939464YPTB1531 13332586 EMBL GBK
YPTB1524 2763128641
YPTB3230 2866230182
38323contig_0003039279YPTB0833 2124822609 EMBL GBK
YPTB0834 2283723085
YPTB0835 2310923657
YPTB0842 3004531166
38414contig_0003137644YPTB0086 2061622139 EMBL GBK
YPTB0089 2361123850
YPTB0097 2568627017
YPTB0101 2984032038
YPTB0104 3272333040
38315 contig_00032 37604
38274contig_0003337207YPTB0734 1274113196 EMBL GBK
YPTB0731 1600616485
YPTB0726 2080321573
YPTB0723 2350024036
YPTB0719 2808928883
38363contig_0003436846sycB (sycB) 3632836837 EMBL GBK
38325 contig_00035 36834
38245contig_0003636654YPTB0270 9012352 EMBL GBK
YPTB0267 46286817
YPTB0266 68297992
YPTB0265 80968797
YPTB0264 885210372
YPTB0262 1118612208
YPTB0261 1222313005
YPTB0250 2362224383
YPTB0247 2832729280
YPTB0240 3314533990
38317contig_0003736118YPTB2799 1552716339 EMBL GBK
YPTB2797 1637216917
YPTB2794 1912919755
YPTB2789 2430125365
YPTB2785 2544325913
YPTB2781 2889329606
YPTB2779 3078331235
YPTB2775 3422435351
38446contig_0003835869YPTB2819 1828418622 EMBL GBK
38439contig_0003935723YPTB0671 18642961 EMBL GBK
38421 contig_00040 35365
38326 contig_00041 35011
38389contig_0004233946YPTB2929 34363783 EMBL GBK
YPTB2940 1558716273
YPTB2942 1717518893
38358contig_0004333605YPTB0296 47925382 EMBL GBK
YPTB0282 2331223680
YPTB0280 2460325307
YPTB0279 2531125739
YPTB0278 2593326478
YPTB0277 2648026863
38447contig_0004432933YPTB1921 1660017130 EMBL GBK
38362contig_0004532417YPTB0523 1773818787 EMBL GBK
YPTB0530 2718027629
YPTB0531 2780029311
YPTB0532 2959130685
38246contig_0004631854YPTB0003 1496215954 EMBL GBK
YPTB0002 1613816599
YPTB3973 2130922133
YPTB3971 2248122951
YPTB3970 2296623499
YPTB3969 2351425055
YPTB3966 2748327905
YPTB3965 2840029770
38293contig_0004731679YPTB0424 73498290 EMBL GBK
YPTB0425 84078712
YPTB0438 2262723019
YPTB0439 2302523345
YPTB0440 2335023577
YPTB0441 2361724069
YPTB0444 2575326373
38424contig_0004831467YPTB0463 25813552 EMBL GBK
YPTB0464 38124123
YPTB0465 41434400
YPTB0470 84439891
YPTB0471 1015210628
YPTB0472 1075711050
YPTB0473 1119711826
YPTB0475 1413914972
YPTB0476 1498216322
YPTB0478 1742817886
YPTB0481 2216422574
YPTB0483 2366223931
YPTB0485 2643527319
38273contig_0004931299YPTB2714 78598827 EMBL GBK
YPTB2715 92809537
YPTB2716 958511312
YPTB2761 3044830714
38302 contig_00050 30765
38250contig_0005130731YPTB3649 1477016416 EMBL GBK
YPTB0370 3009630704
38308 contig_00052 30417
38279contig_0005329897YPTB1316 60546626 EMBL GBK
YPTB1330 1460215540
38364contig_0005429731YPTB2640 1064811412 EMBL GBK
YPTB2637 1378815098
YPTB2632 2015621241
YPTB2630 2209322899
38266contig_0005529691YPTB1297 1289813125 EMBL GBK
YPTB1309 2786028444
38353contig_0005629311YPTB0412 1033111065 EMBL GBK
YPTB0411 1108211474
YPTB0408 1338213948
YPTB0404 1748717780
YPTB0402 1899920435
38283 contig_00057 29155
38384contig_0005827624YPTB1647 1424115605 EMBL GBK
38381contig_0005927469YPTB0548 2162222497 EMBL GBK
38286contig_0006027114YPTB3033 42345028 EMBL GBK
YPTB3034 50355907
YPTB3035 60328278
YPTB3036 82918818
YPTB3042 1347215628
38399 contig_00061 25696
38296contig_0006225148YPTB2389 2111121344 EMBL GBK
38331contig_0006324306YPTB3786 1214014128 EMBL GBK
38434contig_0006423761YPTB2609 16822368 EMBL GBK
YPTB2612 44015918
YPTB2613 59316440
YPTB2617 1010010762
YPTB3790 1175412764
38253contig_0006522884YPTB0990 41434523 EMBL GBK
YPTB0981 1816218305
YPTB0979 2202022388
38360contig_0006622795ysa_29 38644298 EMBL GBK
ysa_28 43034773
ysaH (ysaH) 49475423
ysa_24 65517099
ysaJ (ysaJ) 70967839
ysa_20 85889817
ysaE (ysaE) 1009710777
ysaW (ysaW) 1245113560
ysaV (ysaV) 1355715629
ysaK (ysaK) 1564116048
ysaN (ysaN) 1605217344
ysa_13 1734417799
ysaQ (ysaQ) 1885619791
ysaR (ysaR) 1979720468
ysaS (ysaS) 2048420753
ysaU (ysaU) 2156922693
38428contig_0006722649YPTB0375 14592865 EMBL GBK
YPTB0376 29454024
YPTB0377 40815274
38324contig_0006822325YPTB0876 28253367 EMBL GBK
YPTB0873 48846044
YPTB0858 90599400
YPTB0857 957210084
YPTB0851 1744220084
38356 contig_00069 21997
38318contig_0007021341YPTB2001 1067511622 EMBL GBK
YPTB2005 1498016062
YPTB2007 1697717378
YPTB2008 1737518184
YPTB2009 1839919253
38269contig_0007120691t3c_6 57296436 EMBL GBK
YPTB0337 1238213386
38373 contig_00072 20340
38369contig_0007320200YPTB0713 39416604 EMBL GBK
YPTB0712 69077671
38251contig_0007420140YPTB2594 63376831 EMBL GBK
YPTB2595 69707425
YPTB2597 78589060
YPTB2600 1322613669
YPTB2601 1371213999
YPTB2602 1401215268
38233contig_0007519990YPTB2549 1681217468 EMBL GBK
38347 contig_00076 19723
38395contig_0007719620YPTB2585 34605256 EMBL GBK
YPTB2581 1001510992
YPTB2580 1100711549
YPTB2578 1210412406
YPTB2577 1240314247
38289 contig_00078 18542
38386contig_0007918482YPTB1098 17302200 EMBL GBK
YPTB1097 22924187
YPTB1096 42105322
YPTB1091 938610351
38340 contig_00080 17885
38396contig_0008117011YPTB1212 44025388 EMBL GBK
YPTB1209 83569462
YPTB1192 1088711132
38343contig_0008216874x_1 966611075 EMBL GBK
YPTB0028 1519715634
38282 contig_00083 16760
38376contig_0008416439YPTB0121 910610506 EMBL GBK
38299contig_0008515734YPTB1940 970010227 EMBL GBK
38244 contig_00086 15427
38407 contig_00087 15005
38267 contig_00088 14813
38448contig_0008914175YPTB2967 20482803 EMBL GBK
YPTB2966 28513570
YPTB2965 35864050
38228contig_0009014175x_3 49135026 EMBL GBK
YPTB1615 52675653
38275contig_0009113847YPTB0450 1210913440 EMBL GBK
38387 contig_00092 13423
38350 contig_00093 13058
38237 contig_00094 12996
38265 contig_00095 12603
38346 contig_00096 12457
38314 contig_00097 12353
38402 contig_00098 12265
38403 contig_00099 12019
38288 contig_00100 11667
38236 contig_00101 11591
38306 contig_00102 11412
38400 contig_00103 10820
38303 contig_00104 10365
38354 contig_00105 10158
38435 contig_00106 10074
38297 contig_00107 9819
38361 contig_00108 9704
38290 contig_00109 9463
38234contig_001109422YPTB2895 12012157 EMBL GBK
YPTB2897 28393414
38419 contig_00111 9412
38271 contig_00112 9285
38298 contig_00113 9222
38278contig_001148885YPTB1135 19922486 EMBL GBK
YPTB1141 67117289
38371 contig_00115 8572
38351contig_001168502YPTB0494 5941472 EMBL GBK
38256 contig_00117 8336
38292contig_001188099YPTB0994 40814686 EMBL GBK
YPTB0993 46865018
38391 contig_00119 7799
38410contig_001207732YPTB0887 3871730 EMBL GBK
YPTB0889 29653765
YPTB0890 37584387
YPTB0892 50066229
YPTB0894 73037530
38304 contig_00121 7670
38429 contig_00122 7624
38257 contig_00123 7325
38427 contig_00124 7299
38252 contig_00125 7298
38412 contig_00126 6779
38248 contig_00127 6461
38417 contig_00128 6359
38322 contig_00129 6257
38285 contig_00130 6254
38406contig_001316096t3e_5 13492215 EMBL GBK
38408 contig_00132 6067
38370 contig_00133 6027
38418 contig_00136 5521
38242 contig_00137 5458
38444 contig_00138 5425
38321 contig_00139 5163
38255 contig_00140 5153
38367 contig_00141 5052
38264 contig_00142 5013
38270 contig_00143 4922
38259 contig_00144 4443
38433 contig_00145 4382
38332 contig_00146 4330
38415 contig_00147 3991
38409 contig_00148 3811
38342 contig_00149 3721
38366contig_001503556YPTB0373 517735 EMBL GBK
38280 contig_00151 3443
38397 contig_00134 3428
38388 contig_00152 3287
38310 contig_00153 3225
38284 contig_00154 3085
38295 contig_00155 2855
38432 contig_00156 2781
38249 contig_00157 2779
38394 contig_00158 2493
38254 contig_00159 2451
38232 contig_00160 2414
38423 contig_00161 2306
38330 contig_00162 2145
38426 contig_00163 2131
38405 contig_00164 2117
38301 contig_00165 2075
38425 contig_00166 2074
38294 contig_00167 1990
38320 contig_00168 1986
38231 contig_00169 1971
38240 contig_00170 1951
38341 contig_00171 1906
38338 contig_00172 1795
38247 contig_00173 1760
38316 contig_00135 1747
38334 contig_00174 1552
38445 contig_00175 1539
38411 contig_00176 1534
38312 contig_00177 1525
38309 contig_00178 1439
38441 contig_00179 1417
38327 contig_00180 1292
38436 contig_00181 1233
38263 contig_00182 1212
38352 contig_00183 1165
38420 contig_00184 1077
38287 contig_00185 1004
38375 contig_00186 999
38305 contig_00187 997
38379 contig_00188 940
38404 contig_00189 906
38230 contig_00190 885
38368 contig_00191 857
38344 contig_00192 839
38281 contig_00193 823
38442 contig_00194 759
38243 contig_00195 699
38260 contig_00196 684
38380 contig_00197 682
38333 contig_00198 659
38385 contig_00199 649
38262 contig_00200 637
38359 contig_00201 607
38336 contig_00202 596
38422 contig_00203 580
38431 contig_00205 570
38390 contig_00207 506
38291 contig_00208 470
38393 contig_00209 433
38348 contig_00204 425
38319 contig_00210 420
38430 contig_00211 383
38239 contig_00206 378
38378 contig_00212 368
38277 contig_00213 365
38307 contig_00214 326
38413 contig_00215 308
38392 contig_00216 282
38329 contig_00217 276
38401 contig_00218 263
38300 contig_00219 241
38374 contig_00220 224
38311 contig_00221 202