Full information on isolate IP37983 (id:1844)

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This isolate is a member of the following project:

Public isolates: This project contains the isolates that should be publicly available through the public access database.

id: 1844
isolate: IP37983
accession number: GCA_902169375.1
species phenotypic: enterocolitica
biotype: 2
serotype: O:9
species genotypic: enterocolitica
genotype: 2/3-9b
isolation date: 30/06/2016
category: Clinical
origin: Blood
age: 86
sex: F
comments: jusqu'au 12/05/2019 assignation: Y.enterocolitica genotype 23-9b
sender: Cyril Savin
curator: Cyril Savin, Institut Pasteur, Paris, France (E-mail: cyril.savin@pasteur.fr)
update history: 19 updates show details
date entered: 2017-01-12
datestamp: 2026-01-05
date received: 2016-07-06
CP patient: 13160
CP labo: 84902
country code: FRA
country: France

Scheme	Scheme loci	Designated loci	Annotation
Scheme	Scheme loci	Designated loci	Score	Status
Yersinia cgMLST	500	499	99
Y.enterocolitica cgMLST	1727	1718	99
Y.pseudotuberculosis cgMLST	1921	499	25

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Experimental schemes are subject to change and are not a stable part of the nomenclature.

Classification scheme	Underlying scheme	Clustering method	Mismatch threshold	Status	Group
Y.enterocolitica_5-mismatch	Y.enterocolitica cgMLST	Single-linkage	5	experimental	175 (254 isolates)
Y.enterocolitica_3-mismatch	Y.enterocolitica cgMLST	Single-linkage	3	experimental	680 (1 isolate)
Y.enterocolitica_5-mismatch	Y.enterocolitica cgMLST	Single-linkage	5	experimental	175 (254 isolates)

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