Database status
Sequences
- Total
- 2,566,087
- Last updated
- 2026-08-19
Schemes
Schemes are collections of loci. They may be indexed, in which case they have a primary key field that identifies unique combinations of alleles.
- MLST
- cgMLST1748
- PCR-serogroup
- Virulence
- Antibiotic Resistance
- Metal & Disinfectants Resistance
- Stress Islands
- Listeria Genomic Islands
- sigB operon
- Rhamnose operon
- Clonogrouping
- PBPs
- cgMLST1748_v2
- Motility
LIN codes
LIN codes are defined for the following schemes:
| Scheme | thresholds | Nickname fields |
|---|---|---|
| cgMLST1748_v2 | 1660;1500;1342;1182;1020;200;50;7;4;2;1;0 | Lineage Sublineage Genetic cluster |
Loci
5022 loci defined.