Scheme information - cgMLST1748

reset: 28-01-2022

References

• Moura A, Criscuolo A, Pouseele H, Maury MM, Leclercq A, Tarr C, Björkman JT, Dallman T, Reimer A, Enouf V, Larsonneur E, Carleton H, Bracq-Dieye H, Katz LS, Jones L, Touchon M, Tourdjman M, Walker M, Stroika S, Cantinelli T, Chenal-Francisque V, Kucerova Z, Rocha EP, Nadon C, Grant K, Nielsen EM, Pot B, Gerner-Smidt P, Lecuit M, Brisse S (2016). Whole genome-based population biology and epidemiological surveillance of Listeria monocytogenes. Nat Microbiol 2:16185

Fields

The primary key field indexes unique combinations of alleles at the member loci.

• profile_id Primary key
  • cgMLST profile id

Loci

This scheme consists of alleles from 1748 loci.

Profiles

This scheme has 33,904 profiles defined.