Download scheme profiles

Schemes are collections of loci. They may be indexed, in which case they have a primary key field that identifies unique combinations of alleles. The following schemes are indexed.

Name Download ProfilesDescriptionCurator(s)Last updated
MLST 117Bordetella pertussis MLST scheme: adk, fumC, glyA, icd, pepA, pgm, tyrBSylvain Brisse, Valerie Bouchez, Karen Register, Andrew Preston2024-06-17
Autotransporters 0prn excluded
Bp_vaccine antigens 136prn excluded2024-09-20
cgMLST_pertussis 1,949cgMLST for Bordetella pertussis (Pasteur)2020-10-07
Other toxins 0
Phase 0
T3SS 952024-06-18