Download scheme profiles

Schemes are collections of loci. They may be indexed, in which case they have a primary key field that identifies unique combinations of alleles. The following schemes are indexed.

NameDownloadProfilesDescriptionCurator(s)Last updated
MLST107Bordetella pertussis MLST scheme: adk, fumC, glyA, icd, pepA, pgm, tyrBSylvain Brisse, Karen Register, Andrew Preston, Valerie Bouchez2023-06-08
Autotransporters0prn excluded
Bp_vaccine antigens132prn excluded2024-01-15
cgMLST_pertussis1,949cgMLST for Bordetella pertussis (Pasteur)2020-10-07
Other toxins0
Phase0
T3SS942022-03-31