Main projects defined in the Bordetella cgMLST database

Project idShort descriptionFull descriptionIsolatesDashboardBrowse
5bebp_publicAll public isolates from BEBP lab (Pasteur). Old public_isolates171
9Bouchez_2018_EIDAll isolates published in Bouchez et al. Emerg Inf Dis. 2018168
21Bordetella genogroups genomes20
23Bordetella genus phylogenyReference genomes for Bordetella genomic analysis. Public project92
24B. bronchiseptica phylogenyRecords for the phylogeny211
25B. pertussis phylogeny(resistance macrolide = 23S RNA 13)124
27Public Genomespublic genomes analyzed in Bridel et al 20222085
29Public-nrdA projectpublic isolates used to build a phylogeny based on nrdA (BORD004376) locus180