Full information on isolate BP1-Shangai-2016 (id:4888)
Provenance/primary metadata
- id
- 4888
- isolate
- BP1-Shangai-2016
- species
- B. pertussis
- site
- nasopharynx
- disease
- pertussis
- country
- China
- continent
- Asia
- city
- Shangai
- year
- 2016
- source type
- Human
- host
- human
- accession number
- SAMN33268689
- comments
- Fu P, Zhou J, Yang C, Nijiati Y, Zhou L, Yan G, et al. Molecular Evolution and Increasing Macrolide Resistance of Bordetella pertussis, Shanghai, China, 2016–2022. Emerg Infect Dis. 2024;30(1):29-38. https://doi.org/10.3201/eid3001.221588
- sequencing technology
- Pacbio+Illumina
- sender
- Valerie Bouchez, Institut Pasteur, Paris
- curator
- Auto Tagger
- update history
- 3 updates show details
- date entered
- 2024-04-29
- datestamp
- 2024-04-29
Assembly checks
| Check | Status | Warn/fail reason |
|---|---|---|
| Number of contigs | ||
| Assembly size | ||
| Minimum N50 | ||
| %GC |
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