Full information on isolate AU14267 (id:304)
Projects
Provenance/primary metadata
- id
- 304
- isolate
- AU14267
- aliases
- ASM211974v1; GCF_002119745.1; SAMN06767135
- species
- Genomic species 9
- site
- sputum
- disease
- cystic fibrosis
- country
- USA
- continent
- North America
- year
- 2007
- source type
- Human
- host
- human
- comments
- Bordetella genogroup 9 complete genome
- sender
- Theodore Spilker, Univ. of Michigan
- curator
- Sebastien Bridel, Institut Pasteur, Paris, France (E-mail: sbridel@pasteur.fr)
- update history
- 10 updates show details
- date entered
- 2013-10-29
- datestamp
- 2022-03-31
Publication (1)
- Bridel S, Bouchez V, Brancotte B, Hauck S, Armatys N, Landier A, Mühle E, Guillot S, Toubiana J, Maiden MCJ, Jolley KA, Brisse S (2022). A comprehensive resource for Bordetella genomic epidemiology and biodiversity studies. Nat Commun 13:3807
Sequence bin
- method
- Illumina
- contigs
- 1
- length
- 4,497,105 bp
- %GC
- 66.00
- Ns
- 0
- gaps
- 0
- loci tagged
- 1,152
Assembly checks
| Check | Status | Warn/fail reason |
|---|---|---|
| Number of contigs | ||
| Assembly size | ||
| Minimum N50 | ||
| %GC |
Schemes and loci
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