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Full information on isolate INF312 (id:6183)

Projects

This isolate is a member of the following projects:

Public isolates
This project contains the isolates that should be publicly available through the public access database.
Gorrie et al. 2017
Gastrointestinal Carriage Is a Major Reservoir of Klebsiella pneumoniae Infection in Intensive Care Patients (PMID: 28369261)

Provenance/primary metadata

id
6183
isolate
INF312
sender
Kat Holt, Melbourne U
curator
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update history
10 updates show details
date entered
2017-12-04
datestamp
2024-03-26
taxonomic designation
K. variicola
phylogroup from ST
Kp3 (7 loci)
isolation year
2014
city
Melbourne
country
Australia
continent
Oceania
source type
Human
host
Human
source details
Blood
infection
Disseminated
other source info
Blood culture
accession number
SRR5082449

Sequence bin

contigs
59
total length
5,801,276 bp
max length
1,531,245 bp
mean length
98,327 bp
N50
289,695
L50
5
N90
70,195
L90
22
N95
41,851
L95
28
%GC
56.97
Ns
129
gaps
100
loci tagged
674

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Assembly checks

CheckStatusWarn/fail reason
Number of contigs
Assembly size
Minimum N50
%GC

Annotation quality metrics

Scheme completion

SchemeScheme lociDesignated lociAnnotation
ScoreStatus
MLST77100
Ribosomal MLST5353100
scgMLST629_S62961998

Schemes and loci

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