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Full information on isolate INF267 (id:6170)

Projects

This isolate is a member of the following projects:

Public isolates
This project contains the isolates that should be publicly available through the public access database.
Gorrie et al. 2017
Gastrointestinal Carriage Is a Major Reservoir of Klebsiella pneumoniae Infection in Intensive Care Patients (PMID: 28369261)

Provenance/primary metadata

id
6170
isolate
INF267
sender
Kat Holt, Melbourne U
curator
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update history
11 updates show details
date entered
2017-12-04
datestamp
2024-03-26
taxonomic designation
K. variicola
phylogroup from ST
Kp3 (7 loci)
isolation year
2013
city
Melbourne
country
Australia
continent
Oceania
source type
Human
host
Human
source details
Blood
infection
Disseminated
other source info
Blood culture
accession number
ERR1023720

Sequence bin

contigs
124
total length
5,690,221 bp
max length
484,161 bp
mean length
45,889 bp
N50
112,435
L50
14
N90
26,704
L90
50
N95
19,673
L95
62
%GC
57.25
Ns
184
gaps
160
loci tagged
670

Show sequence bin

Assembly checks

CheckStatusWarn/fail reason
Number of contigs
Assembly size
Minimum N50
%GC

Annotation quality metrics

Scheme completion

SchemeScheme lociDesignated lociAnnotation
ScoreStatus
MLST77100
Ribosomal MLST5353100
scgMLST629_S62961597

Schemes and loci

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