Full information on isolate SB3432 (id:384)

Projects

This isolate is a member of the following projects:

Public isolates: This project contains the isolates that should be publicly available through the public access database.
published_genomes: All isolates with published genome imported in BIGSdb, and validated for scgMLST_S study

id: 384
isolate: SB3432
alias: 04-6021
sender: Sylvain Brisse, Institut Pasteur, Paris, France
curator: Sebastien Bridel, Institut Pasteur, Paris, France (E-mail: sbridel@pasteur.fr)
update history: 49 updates show details
date entered: 2009-02-10
datestamp: 2022-11-03
taxonomic designation: K. pneumoniae subsp. rhinoscleromatis
phylogroup from ST: Kp1 (7 loci)
QC status: 0000
isolation year: 2004
city: Paris
country: France
continent: Europe
source type: Human
host: Human
source details: Respiratory
infection: Rhinoscleroma
other source info: Nose
source lab: Institut Pasteur, CIMB
accession number: NC_021231, NC_021232

Brisse S, Fevre C, Passet V, Issenhuth-Jeanjean S, Tournebize R, Diancourt L, Grimont P (2009). Virulent clones of Klebsiella pneumoniae: identification and evolutionary scenario based on genomic and phenotypic characterization. PLoS One 4:e4982
Fevre C, Passet V, Deletoile A, Barbe V, Frangeul L, Almeida AS, Sansonetti P, Tournebize R, Brisse S (2011). PCR-based identification of Klebsiella pneumoniae subsp. rhinoscleromatis, the agent of rhinoscleroma. PLoS Negl Trop Dis 5:e1052

Scheme	Scheme loci	Designated loci	Annotation
Scheme	Scheme loci	Designated loci	Score	Status
MLST	7	7	100
Ribosomal MLST	53	50	94
scgMLST629_S	629	594	94

Rank	Taxon	Taxonomy	Support	Matches
SPECIES	Klebsiella pneumoniae	Proteobacteria > Gammaproteobacteria > Enterobacterales > Enterobacteriaceae > Klebsiella > Klebsiella pneumoniae	100%

Analysis performed: 2022-11-02

Analysis performed: 2023-07-21; Kleborate v2.3.2

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