Full information on isolate KK245 (id:87)

Projects

This isolate is a member of the following projects:

public
Public isolates
Murik_2021
Genomic insights into the population structure and virulence of Kingella kingae: Infection of Kingella kingae in young children may result in a variety of clinical outcomes including skeletal infections, bacteremia and endocarditis. However, the factor determining the type and severity of the desease are not known. We used a comperative genomic approach in order to find genetic factors distigushing isolates taken from patients with different clinical outcomes, as well as asymptomatic carriers.

Provenance/primary metadata

id
87
taxonomic designation
K. kingae
isolate
KK245
PFGE clone
A
isolation year
2005
country of isolation
Israel
city or region
South
laboratory source
Yagupsky
sample origin
Blood
disease
Occult bacteremia
class of disease
Occult bacteremia
sender
Bidet Philippe, APHP Robert-Debre Hospital, Paris, France
curator
Sylvain Brisse, Institut Pasteur, Paris, France (E-mail: sylvain.brisse@pasteur.fr)
update history
1 update show details
date entered
2015-04-23
datestamp
2015-04-23

Sequence bin

contigs
160
total length
2,092,082 bp
max length
112,898 bp
mean length
13,076 bp
N50
51,054
L50
13
N90
9,073
L90
48
N95
4,136
L95
65
%GC
46.69
Ns
98
gaps
1
loci tagged
0

Show sequence bin

Schemes and loci

MLST

abcZ (abcZ)
6
adk (adk)
7
aroE (aroE)
11
cpn60 (cpn60)
3
gdh (gdh)
11
recA (recA)
5
ST
33

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