Full information on isolate KK242 (id:86)

Projects

This isolate is a member of the following projects:

public
Public isolates
Murik_2021
Genomic insights into the population structure and virulence of Kingella kingae: Infection of Kingella kingae in young children may result in a variety of clinical outcomes including skeletal infections, bacteremia and endocarditis. However, the factor determining the type and severity of the desease are not known. We used a comperative genomic approach in order to find genetic factors distigushing isolates taken from patients with different clinical outcomes, as well as asymptomatic carriers.

Provenance/primary metadata

id
86
taxonomic designation
K. kingae
isolate
KK242
PFGE clone
V
isolation year
2005
country of isolation
Israel
city or region
South
laboratory source
Yagupsky
sample origin
Blood
disease
Occult bacteremia
class of disease
Occult bacteremia
sender
Bidet Philippe, APHP Robert-Debre Hospital, Paris, France
curator
Sylvain Brisse, Institut Pasteur, Paris, France (E-mail: sylvain.brisse@pasteur.fr)
update history
1 update show details
date entered
2015-04-23
datestamp
2015-04-23

Sequence bin

contigs
200
total length
2,024,852 bp
max length
145,054 bp
mean length
10,125 bp
N50
28,992
L50
20
N90
6,895
L90
72
N95
3,240
L95
95
%GC
46.62
Ns
0
gaps
0
loci tagged
0

Show sequence bin

Schemes and loci

MLST

abcZ (abcZ)
12
adk (adk)
6
aroE (aroE)
10
cpn60 (cpn60)
3
gdh (gdh)
9
recA (recA)
2
ST
27

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