Full information on isolate KK197 (id:78)

Projects

This isolate is a member of the following projects:

public
Public isolates
Murik_2021
Genomic insights into the population structure and virulence of Kingella kingae: Infection of Kingella kingae in young children may result in a variety of clinical outcomes including skeletal infections, bacteremia and endocarditis. However, the factor determining the type and severity of the desease are not known. We used a comperative genomic approach in order to find genetic factors distigushing isolates taken from patients with different clinical outcomes, as well as asymptomatic carriers.

Provenance/primary metadata

id
78
taxonomic designation
K. kingae
isolate
KK197
PFGE clone
P
isolation year
2003
country of isolation
Israel
city or region
Center
laboratory source
Yagupsky
sample origin
Unknown
disease
Endocarditis
class of disease
Endocarditis
sender
Bidet Philippe, APHP Robert-Debre Hospital, Paris, France
curator
Sylvain Brisse, Institut Pasteur, Paris, France (E-mail: sylvain.brisse@pasteur.fr)
update history
1 update show details
date entered
2015-04-23
datestamp
2015-04-23

Sequence bin

contigs
131
total length
2,010,181 bp
max length
154,975 bp
mean length
15,345 bp
N50
65,032
L50
11
N90
13,083
L90
41
N95
4,640
L95
56
%GC
46.64
Ns
97
gaps
1
loci tagged
0

Show sequence bin

Schemes and loci

MLST

abcZ (abcZ)
2
adk (adk)
2
aroE (aroE)
8
cpn60 (cpn60)
2
gdh (gdh)
2
recA (recA)
2
ST
24

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