Full information on isolate KK183 (id:75)

Projects

This isolate is a member of the following projects:

public
Public isolates
Murik_2021
Genomic insights into the population structure and virulence of Kingella kingae: Infection of Kingella kingae in young children may result in a variety of clinical outcomes including skeletal infections, bacteremia and endocarditis. However, the factor determining the type and severity of the desease are not known. We used a comperative genomic approach in order to find genetic factors distigushing isolates taken from patients with different clinical outcomes, as well as asymptomatic carriers.

Provenance/primary metadata

id
75
taxonomic designation
K. kingae
isolate
KK183
PFGE clone
TNC
isolation year
2002
country of isolation
Israel
city or region
North
laboratory source
Yagupsky
sample origin
Unknown
disease
Arthritis
class of disease
OAI
sender
Bidet Philippe, APHP Robert-Debre Hospital, Paris, France
curator
Sylvain Brisse, Institut Pasteur, Paris, France (E-mail: sylvain.brisse@pasteur.fr)
update history
1 update show details
date entered
2015-04-23
datestamp
2015-04-23

Sequence bin

contigs
157
total length
2,007,450 bp
max length
179,418 bp
mean length
12,787 bp
N50
49,902
L50
11
N90
10,973
L90
43
N95
3,717
L95
61
%GC
46.66
Ns
96
gaps
1
loci tagged
0

Show sequence bin

Schemes and loci

MLST

abcZ (abcZ)
3
adk (adk)
3
aroE (aroE)
3
cpn60 (cpn60)
3
gdh (gdh)
10
recA (recA)
4
ST
13

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