Full information on isolate KK180 (id:74)

Projects

This isolate is a member of the following projects:

public
Public isolates
Murik_2021
Genomic insights into the population structure and virulence of Kingella kingae: Infection of Kingella kingae in young children may result in a variety of clinical outcomes including skeletal infections, bacteremia and endocarditis. However, the factor determining the type and severity of the desease are not known. We used a comperative genomic approach in order to find genetic factors distigushing isolates taken from patients with different clinical outcomes, as well as asymptomatic carriers.

Provenance/primary metadata

id
74
taxonomic designation
K. kingae
isolate
KK180
PFGE clone
N
isolation year
2002
country of isolation
Israel
city or region
Center
laboratory source
Yagupsky
sample origin
Unknown
disease
Endocarditis
class of disease
Endocarditis
sender
Bidet Philippe, APHP Robert-Debre Hospital, Paris, France
curator
Sylvain Brisse, Institut Pasteur, Paris, France (E-mail: sylvain.brisse@pasteur.fr)
update history
1 update show details
date entered
2015-04-23
datestamp
2015-04-23

Sequence bin

contigs
102
total length
1,952,109 bp
max length
192,434 bp
mean length
19,139 bp
N50
66,889
L50
9
N90
17,203
L90
32
N95
5,936
L95
42
%GC
46.69
Ns
0
gaps
0
loci tagged
0

Show sequence bin

Schemes and loci

MLST

abcZ (abcZ)
1
adk (adk)
8
aroE (aroE)
3
cpn60 (cpn60)
6
gdh (gdh)
1
recA (recA)
3
ST
10

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