Full information on isolate KK88 (id:61)

Projects

This isolate is a member of the following projects:

public
Public isolates
Murik_2021
Genomic insights into the population structure and virulence of Kingella kingae: Infection of Kingella kingae in young children may result in a variety of clinical outcomes including skeletal infections, bacteremia and endocarditis. However, the factor determining the type and severity of the desease are not known. We used a comperative genomic approach in order to find genetic factors distigushing isolates taken from patients with different clinical outcomes, as well as asymptomatic carriers.

Provenance/primary metadata

id
61
taxonomic designation
K. kingae
isolate
KK88
PFGE clone
D
isolation year
1996
country of isolation
Israel
city or region
North
laboratory source
Yagupsky
sample origin
Unknown
disease
Osteomyelitis
class of disease
OAI
sender
Bidet Philippe, APHP Robert-Debre Hospital, Paris, France
curator
Sylvain Brisse, Institut Pasteur, Paris, France (E-mail: sylvain.brisse@pasteur.fr)
update history
1 update show details
date entered
2015-04-23
datestamp
2015-04-23

Sequence bin

contigs
127
total length
1,941,668 bp
max length
110,345 bp
mean length
15,289 bp
N50
63,246
L50
11
N90
12,383
L90
41
N95
5,048
L95
53
%GC
46.65
Ns
100
gaps
1
loci tagged
0

Show sequence bin

Schemes and loci

MLST

abcZ (abcZ)
1
adk (adk)
1
aroE (aroE)
1
cpn60 (cpn60)
1
gdh (gdh)
1
recA (recA)
3
ST
2

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