Full information on isolate KK86 (id:60)

Projects

This isolate is a member of the following projects:

public
Public isolates
Murik_2021
Genomic insights into the population structure and virulence of Kingella kingae: Infection of Kingella kingae in young children may result in a variety of clinical outcomes including skeletal infections, bacteremia and endocarditis. However, the factor determining the type and severity of the desease are not known. We used a comperative genomic approach in order to find genetic factors distigushing isolates taken from patients with different clinical outcomes, as well as asymptomatic carriers.

Provenance/primary metadata

id
60
taxonomic designation
K. kingae
isolate
KK86
PFGE clone
K
isolation year
1994
country of isolation
Israel
city or region
South
laboratory source
Yagupsky
sample origin
Oropharynx
disease
Asymptomatical carriage
class of disease
Carriage
sender
Bidet Philippe, APHP Robert-Debre Hospital, Paris, France
curator
Sylvain Brisse, Institut Pasteur, Paris, France (E-mail: sylvain.brisse@pasteur.fr)
update history
1 update show details
date entered
2015-04-23
datestamp
2015-04-23

Sequence bin

contigs
175
total length
1,998,621 bp
max length
157,677 bp
mean length
11,421 bp
N50
33,961
L50
17
N90
8,214
L90
63
N95
3,672
L95
83
%GC
46.58
Ns
0
gaps
0
loci tagged
0

Show sequence bin

Schemes and loci

MLST

abcZ (abcZ)
5
adk (adk)
2
aroE (aroE)
4
cpn60 (cpn60)
5
gdh (gdh)
5
recA (recA)
1
ST
6

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